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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181385343
OFRI01070570
283001
Actinomycetota
CGC
Ala
>WENV181385413
OFRI01083615
118154
Actinomycetota
GTA
Tyr
>WENV181385507
OFRI01105374
178276
Actinomycetota
CAT
Met
>WENV181384449
OFRI01001175
119438
Actinomycetota
GTA
Tyr
>WENV181384919
OFRI01020217
119438
Actinomycetota
GTA
Tyr
>WENV181385287
OFRI01058499
178275
Actinomycetota
TGG
Pro
>WENV181385517
OFRI01110082
177965
Actinomycetota
GTC
Asp
>WENV181385102
OFRI01034196
13314
Actinomycetota
GCT
Ser
>WENV181385485
OFRI01099527
407367
Actinomycetota
TGT
Thr
>WENV181385516
OFRI01110082
283095
Actinomycetota
TTC
Glu
>WENV181385403
OFRI01081236
328473
Actinomycetota
CGT
Thr
>WENV181385533
OFRI01113462
399483
Actinomycetota
CTG
Gln
>WENV181384519
OFRI01002111
482586
Actinomycetota
GCA
Cys
>WENV181385500
OFRI01103466
317626
Actinomycetota
GGC
Ala
>WENV181385127
OFRI01037287
289686
Actinomycetota
GTG
His
>WENV181384663
OFRI01004395
289686
Actinomycetota
GTG
His
>WENV181384331
OFRI01000191
289686
Actinomycetota
GTG
His
>WENV181384544
OFRI01002448
420962
Actinomycetota
TAC
Val
>WENV181385121
OFRI01035975
400238
Actinomycetota
CTG
Gln
>WENV181385293
OFRI01059401
400238
Actinomycetota
CTG
Gln
>WENV181384775
OFRI01009466
481421
Actinomycetota
TCC
Gly
>WENV181385306
OFRI01062175
481421
Actinomycetota
TCC
Gly
>WENV181385298
OFRI01059928
399165
Actinomycetota
GCC
Gly
>WENV181384518
OFRI01002111
287577
Actinomycetota
GCC
Gly
>WENV181384345
OFRI01000237
184461
Actinomycetota
CCA
Trp
>WENV181384525
OFRI01002134
184461
Actinomycetota
CCA
Trp
>WENV181384898
OFRI01019128
184461
Actinomycetota
CCA
Trp
>WENV181385214
OFRI01050027
294850
Actinomycetota
GCC
Gly
>WENV181384568
OFRI01002862
294850
Actinomycetota
GCC
Gly
>WENV181384923
OFRI01020356
294908
Actinomycetota
CCT
Arg
>WENV181384784
OFRI01010116
294908
Actinomycetota
CCT
Arg
>WENV181384285
OFRI01000004
407330
Actinomycetota
CCG
Arg
>WENV181385397
OFRI01080123
404049
Actinomycetota
GTT
Asn
>WENV181384531
OFRI01002183
315779
Actinomycetota
GGC
Ala
>WENV181384832
OFRI01013493
315977
Actinomycetota
CTT
Lys
>WENV181384590
OFRI01003271
101026
Actinomycetota
TGA
Ser
>WENV181384942
OFRI01021415
157052
Actinomycetota
GAT
Ile
>WENV181385295
OFRI01059564
282988
Actinomycetota
GTT
Asn
>WENV181384546
OFRI01002480
184462
Actinomycetota
CAT
Met
>WENV181384481
OFRI01001552
184462
Actinomycetota
CAT
Met
>WENV181384344
OFRI01000237
184462
Actinomycetota
CAT
Met
>WENV181385445
OFRI01089069
46642
Actinomycetota
CGA
Ser
>WENV181385540
OFRI01116175
488108
Actinomycetota
CCC
Gly
>WENV181385243
OFRI01052837
56310
Actinomycetota
GGA
Ser
>WENV181385231
OFRI01052095
307128
Actinomycetota
CCA
Trp
>WENV181385118
OFRI01035508
189000
Actinomycetota
CAT
Met
>WENV181384933
OFRI01020933
294834
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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