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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566964
OOCB01000087
235146
Actinomycetota
CGT
Thr
>WENV183567829
OOCB01001167
235347
Actinomycetota
GGC
Ala
>WENV183567830
OOCB01001167
235347
Actinomycetota
GGC
Ala
>WENV183567746
OOCB01000938
235153
Actinomycetota
CCT
Arg
>WENV183566849
OOCB01000034
144589
Actinomycetota
ACG
Arg
>WENV183566902
OOCB01000052
16400
Actinomycetota
GAG
Leu
>WENV183567481
OOCB01000531
37070
Actinomycetota
CGA
Ser
>WENV183567283
OOCB01000335
201717
Actinomycetota
CTT
Lys
>WENV183566966
OOCB01000087
201717
Actinomycetota
CTT
Lys
>WENV183567741
OOCB01000924
235194
Actinomycetota
GTG
His
>WENV183567301
OOCB01000354
158720
Actinomycetota
ACG
Arg
>WENV183567123
OOCB01000187
158720
Actinomycetota
ACG
Arg
>WENV183567045
OOCB01000147
305322
Actinomycetota
TGC
Ala
>WENV183568995
OOCB01011192
245301
Actinomycetota
GCC
Gly
>WENV183567214
OOCB01000278
245301
Actinomycetota
GCC
Gly
>WENV183567988
OOCB01001600
411601
Actinomycetota
CCC
Gly
>WENV183567105
OOCB01000172
144826
Actinomycetota
GGG
Pro
>WENV183566901
OOCB01000052
144826
Actinomycetota
GGG
Pro
>WENV183568673
OOCB01005391
23370
Actinomycetota
GCT
Ser
>WENV183567124
OOCB01000187
147146
Actinomycetota
ACG
Arg
>WENV183567017
OOCB01000125
174149
Actinomycetota
GAT
Ile
>WENV183568942
OOCB01009898
338239
Actinomycetota
TTC
Glu
>WENV183568409
OOCB01003228
338239
Actinomycetota
TTC
Glu
>WENV183566927
OOCB01000072
338239
Actinomycetota
TTC
Glu
>WENV183567054
OOCB01000154
235174
Actinomycetota
TGC
Ala
>WENV183567018
OOCB01000125
235174
Actinomycetota
TGC
Ala
>WENV183567033
OOCB01000136
235101
Actinomycetota
TTT
Lys
>WENV183567939
OOCB01001456
121510
Actinomycetota
TAA
Leu
>WENV183566969
OOCB01000087
356045
Actinomycetota
GAC
Val
>WENV183567279
OOCB01000329
153948
Actinomycetota
GGG
Pro
>WENV183566929
OOCB01000072
44855
Actinomycetota
TGA
Ser
>WENV183569322
OOCB01028401
37212
Actinomycetota
GAG
Leu
>WENV183567012
OOCB01000120
145345
Actinomycetota
TAC
Val
>WENV183566970
OOCB01000087
235199
Actinomycetota
CAC
Val
>WENV183568512
OOCB01003866
44862
Actinomycetota
CGA
Ser
>WENV183566962
OOCB01000087
313386
Actinomycetota
CGT
Thr
>WENV183567225
OOCB01000301
198659
Actinomycetota
TAC
Val
>WENV183567802
OOCB01001105
413665
Actinomycetota
TTG
Gln
>WENV183567828
OOCB01001167
413665
Actinomycetota
TTG
Gln
>WENV183567761
OOCB01000975
254857
Actinomycetota
CCG
Arg
>WENV183566967
OOCB01000087
254857
Actinomycetota
CCG
Arg
>WENV183567572
OOCB01000651
113703
Actinomycetota
TAG
Leu
>WENV183568695
OOCB01005654
144700
Actinomycetota
CAT
Met
>WENV183567482
OOCB01000531
44942
Actinomycetota
TGA
Ser
>WENV183567467
OOCB01000521
144636
Actinomycetota
GAT
Ile
>WENV183567465
OOCB01000521
144636
Actinomycetota
GAT
Ile
>WENV183568188
OOCB01002251
45147
Actinomycetota
CGA
Ser
>WENV183567606
OOCB01000711
295695
Actinomycetota
CTC
Glu
>WENV183566911
OOCB01000054
295695
Actinomycetota
CTC
Glu
>WENV183567037
OOCB01000140
98279
Actinomycetota
GTA
Tyr
>WENV183567607
OOCB01000711
338148
Actinomycetota
CTG
Gln
>WENV183567222
OOCB01000295
338148
Actinomycetota
CTG
Gln
>WENV183566912
OOCB01000054
338148
Actinomycetota
CTG
Gln
>WENV183568900
OOCB01008873
235148
Actinomycetota
GTT
Asn
>WENV183568263
OOCB01002583
235148
Actinomycetota
GTT
Asn
>WENV183567413
OOCB01000472
235148
Actinomycetota
GTT
Asn
>WENV183567411
OOCB01000472
235148
Actinomycetota
GTT
Asn
>WENV183567605
OOCB01000711
53078
Actinomycetota
GGA
Ser
>WENV183566908
OOCB01000054
53078
Actinomycetota
GGA
Ser
>WENV183567032
OOCB01000134
237792
Actinomycetota
CCT
Arg
>WENV183567202
OOCB01000263
338238
Actinomycetota
CCA
Trp
>WENV183566859
OOCB01000037
113702
Actinomycetota
TAA
Leu
>WENV183566848
OOCB01000034
176456
Actinomycetota
TCT
Arg
>WENV183566932
OOCB01000072
144825
Actinomycetota
CAT
Met
>WENV183567784
OOCB01001031
145347
Actinomycetota
CAA
Leu
>WENV183568151
OOCB01002116
338139
Actinomycetota
GTT
Asn
>WENV183566933
OOCB01000072
235348
Actinomycetota
CCT
Arg
>WENV183566913
OOCB01000054
237794
Actinomycetota
CCG
Arg
>WENV183567034
OOCB01000140
16467
Actinomycetota
GCT
Ser
>WENV183567057
OOCB01000154
411554
Actinomycetota
CCC
Gly
>WENV183566910
OOCB01000054
411554
Actinomycetota
CCC
Gly
>WENV183566963
OOCB01000087
113601
Actinomycetota
TAG
Leu
>WENV183568411
OOCB01003243
144595
Actinomycetota
CAA
Leu
>WENV183566860
OOCB01000037
144595
Actinomycetota
CAA
Leu
>WENV183567192
OOCB01000247
145343
Actinomycetota
GGG
Pro
>WENV183568447
OOCB01003416
235149
Actinomycetota
CCT
Arg
>WENV183567315
OOCB01000377
51286
Actinomycetota
TGA
Ser
>WENV183567806
OOCB01001113
414234
Actinomycetota
CTG
Gln
>WENV183567052
OOCB01000154
91808
Actinomycetota
CAG
Leu
>WENV183567831
OOCB01001167
163764
Actinomycetota
TGG
Pro
>WENV183567473
OOCB01000528
145269
Actinomycetota
CAT
Met
>WENV183568258
OOCB01002574
235121
Actinomycetota
CGT
Thr
>WENV183567571
OOCB01000651
235121
Actinomycetota
CGT
Thr
>WENV183567223
OOCB01000295
235121
Actinomycetota
CGT
Thr
>WENV183567654
OOCB01000773
393408
Actinomycetota
TTC
Glu
>WENV183568973
OOCB01010711
144635
Actinomycetota
TGG
Pro
>WENV183567783
OOCB01001031
119485
Actinomycetota
TAA
Leu
>WENV183567989
OOCB01001600
80622
Actinomycetota
CAG
Leu
>WENV183566909
OOCB01000054
80622
Actinomycetota
CAG
Leu
>WENV183567204
OOCB01000263
16222
Actinomycetota
GAG
Leu
>WENV183566855
OOCB01000036
158513
Actinomycetota
TGG
Pro
>WENV183567839
OOCB01001187
163948
Actinomycetota
CAT
Met
>WENV183567575
OOCB01000651
235173
Actinomycetota
GGC
Ala
>WENV183567412
OOCB01000472
235173
Actinomycetota
GGC
Ala
>WENV183567383
OOCB01000441
235173
Actinomycetota
GGC
Ala
>WENV183567055
OOCB01000154
235173
Actinomycetota
GGC
Ala
>WENV183567384
OOCB01000441
243162
Actinomycetota
GTT
Asn
>WENV183567760
OOCB01000963
144660
Actinomycetota
TAC
Val
>WENV183566844
OOCB01000034
278447
Actinomycetota
GTG
His
>WENV183568210
OOCB01002338
267574
Actinomycetota
CAC
Val
>WENV183567574
OOCB01000651
267574
Actinomycetota
CAC
Val
>WENV183567101
OOCB01000171
95593
Actinomycetota
>WENV183567485
OOCB01000539
144823
Actinomycetota
TCT
Arg
>WENV183567316
OOCB01000378
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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