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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
167 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183535596
OOAG01000029
344240
Bacillota
GCC
Gly
>WENV183535604
OOAG01000032
243098
Bacillota
GGT
Thr
>WENV183535652
OOAG01000063
196632
Bacillota
GTC
Asp
>WENV183535653
OOAG01000063
344240
Bacillota
GCC
Gly
>WENV183535681
OOAG01000086
202812
Bacillota
CAT
Met
>WENV183535715
OOAG01000121
344240
Bacillota
GCC
Gly
>WENV183535724
OOAG01000129
196632
Bacillota
GTC
Asp
>WENV183535725
OOAG01000129
245344
Bacillota
GAA
Phe
>WENV183535761
OOAG01000162
248965
Bacillota
GCC
Gly
>WENV183535797
OOAG01000216
344240
Bacillota
GCC
Gly
>WENV183535798
OOAG01000216
419639
Bacillota
GCA
Cys
>WENV183535813
OOAG01000248
411547
Bacillota
CTG
Gln
>WENV183535846
OOAG01000320
411547
Bacillota
CTG
Gln
>WENV183535907
OOAG01000444
202812
Bacillota
CAT
Met
>WENV183535938
OOAG01000527
44854
Bacillota
TGA
Ser
>WENV183535939
OOAG01000527
4624
Bacillota
GCT
Ser
>WENV183535949
OOAG01000580
157838
Bacillota
GTC
Asp
>WENV183535950
OOAG01000580
295033
Bacillota
GAA
Phe
>WENV183535951
OOAG01000580
248965
Bacillota
GCC
Gly
>WENV183535986
OOAG01000716
144612
Bacillota
TCT
Arg
>WENV183535989
OOAG01000721
37269
Bacillota
TGA
Ser
>WENV183536025
OOAG01000851
235095
Bacillota
GGT
Thr
>WENV183536055
OOAG01000968
411547
Bacillota
CTG
Gln
>WENV183536056
OOAG01000968
245298
Bacillota
CGG
Pro
>WENV183536062
OOAG01000986
235079
Bacillota
GAA
Phe
>WENV183536063
OOAG01000986
304022
Bacillota
GCC
Gly
>WENV183536094
OOAG01001123
413152
Bacillota
TCC
Gly
>WENV183536102
OOAG01001178
241441
Bacillota
GCC
Gly
>WENV183536111
OOAG01001240
144594
Bacillota
CAC
Val
>WENV183536115
OOAG01001274
411547
Bacillota
CTG
Gln
>WENV183536123
OOAG01001336
162445
Bacillota
CAT
Met
>WENV183536137
OOAG01001448
411549
Bacillota
TTG
Gln
>WENV183536140
OOAG01001469
157838
Bacillota
GTC
Asp
>WENV183536149
OOAG01001524
411549
Bacillota
TTG
Gln
>WENV183536153
OOAG01001543
235124
Bacillota
TGG
Pro
>WENV183536160
OOAG01001591
235171
Bacillota
CCA
Trp
>WENV183536180
OOAG01001709
411549
Bacillota
TTG
Gln
>WENV183536183
OOAG01001729
411549
Bacillota
TTG
Gln
>WENV183536184
OOAG01001729
411547
Bacillota
CTG
Gln
>WENV183536202
OOAG01001887
58712
Bacillota
CAG
Leu
>WENV183536209
OOAG01001927
313164
Bacillota
TTT
Lys
>WENV183536227
OOAG01002020
411547
Bacillota
CTG
Gln
>WENV183536246
OOAG01002181
338129
Bacillota
TGT
Thr
>WENV183536288
OOAG01002434
144612
Bacillota
TCT
Arg
>WENV183536294
OOAG01002484
37213
Bacillota
TGA
Ser
>WENV183536302
OOAG01002550
11034
Bacillota
GGA
Ser
>WENV183536318
OOAG01002657
338149
Bacillota
CTC
Glu
>WENV183536319
OOAG01002657
144621
Bacillota
GTT
Asn
>WENV183536326
OOAG01002710
202812
Bacillota
CAT
Met
>WENV183536331
OOAG01002792
304022
Bacillota
GCC
Gly
>WENV183536339
OOAG01002950
235124
Bacillota
TGG
Pro
>WENV183536346
OOAG01003077
144612
Bacillota
TCT
Arg
>WENV183536355
OOAG01003117
411547
Bacillota
CTG
Gln
>WENV183536364
OOAG01003236
304022
Bacillota
GCC
Gly
>WENV183536365
OOAG01003236
235117
Bacillota
TAC
Val
>WENV183536366
OOAG01003236
196621
Bacillota
GTC
Asp
>WENV183536367
OOAG01003236
235079
Bacillota
GAA
Phe
>WENV183536368
OOAG01003236
304022
Bacillota
GCC
Gly
>WENV183536375
OOAG01003332
144621
Bacillota
GTT
Asn
>WENV183536376
OOAG01003337
338129
Bacillota
TGT
Thr
>WENV183536394
OOAG01003518
235098
Bacillota
GAC
Val
>WENV183536411
OOAG01003905
235098
Bacillota
GAC
Val
>WENV183536430
OOAG01004139
235171
Bacillota
CCA
Trp
>WENV183536441
OOAG01004309
235079
Bacillota
GAA
Phe
>WENV183536442
OOAG01004309
271471
Bacillota
GCC
Gly
>WENV183536448
OOAG01004418
245296
Bacillota
CCC
Gly
>WENV183536465
OOAG01004713
235124
Bacillota
TGG
Pro
>WENV183536473
OOAG01004900
80612
Bacillota
GTA
Tyr
>WENV183536494
OOAG01005340
157635
Bacillota
TCT
Arg
>WENV183536495
OOAG01005340
144610
Bacillota
GTG
His
>WENV183536496
OOAG01005340
340802
Bacillota
TTG
Gln
>WENV183536501
OOAG01005357
272992
Bacillota
CTT
Lys
>WENV183536515
OOAG01005471
429429
Bacillota
CCA
Trp
>WENV183536516
OOAG01005472
148188
Bacillota
CCG
Arg
>WENV183536520
OOAG01005528
235095
Bacillota
GGT
Thr
>WENV183536523
OOAG01005562
235098
Bacillota
GAC
Val
>WENV183536524
OOAG01005563
267649
Bacillota
TAC
Val
>WENV183536532
OOAG01005740
44854
Bacillota
TGA
Ser
>WENV183536533
OOAG01005740
4624
Bacillota
GCT
Ser
>WENV183536547
OOAG01005959
277200
Bacillota
GGC
Ala
>WENV183536559
OOAG01006248
341763
Bacillota
CTC
Glu
>WENV183536560
OOAG01006252
309417
Bacillota
GGC
Ala
>WENV183536561
OOAG01006281
411549
Bacillota
TTG
Gln
>WENV183536570
OOAG01006368
304022
Bacillota
GCC
Gly
>WENV183536592
OOAG01006939
235098
Bacillota
GAC
Val
>WENV183536597
OOAG01007055
413152
Bacillota
TCC
Gly
>WENV183536599
OOAG01007182
235098
Bacillota
GAC
Val
>WENV183536604
OOAG01007347
152492
Bacillota
GGG
Pro
>WENV183536612
OOAG01007688
338149
Bacillota
CTC
Glu
>WENV183536613
OOAG01007688
144621
Bacillota
GTT
Asn
>WENV183536634
OOAG01008104
267649
Bacillota
TAC
Val
>WENV183536641
OOAG01008333
309417
Bacillota
GGC
Ala
>WENV183536645
OOAG01008362
148239
Bacillota
TCT
Arg
>WENV183536646
OOAG01008362
156937
Bacillota
GTG
His
>WENV183536657
OOAG01008569
144594
Bacillota
CAC
Val
>WENV183536669
OOAG01008830
144583
Bacillota
ACG
Arg
>WENV183536672
OOAG01008910
148188
Bacillota
CCG
Arg
>WENV183536677
OOAG01008986
235098
Bacillota
GAC
Val
>WENV183536684
OOAG01009152
144594
Bacillota
CAC
Val
>WENV183536685
OOAG01009167
304022
Bacillota
GCC
Gly
>WENV183536689
OOAG01009366
313454
Bacillota
GAA
Phe
>WENV183536700
OOAG01009657
245296
Bacillota
CCC
Gly
>WENV183536706
OOAG01009814
411547
Bacillota
CTG
Gln
>WENV183536734
OOAG01011418
412387
Bacillota
GCA
Cys
>WENV183536750
OOAG01012170
307003
Bacillota
TGC
Ala
>WENV183536760
OOAG01012771
153911
Bacillota
GAT
Ile
>WENV183536761
OOAG01012772
235095
Bacillota
GGT
Thr
>WENV183536771
OOAG01013402
419877
Bacillota
TCC
Gly
>WENV183536775
OOAG01013402
235127
Bacillota
TTT
Lys
>WENV183536780
OOAG01013954
338152
Bacillota
TTC
Glu
>WENV183536789
OOAG01014815
37269
Bacillota
TGA
Ser
>WENV183536794
OOAG01015148
24650
Bacillota
TAA
Leu
>WENV183536820
OOAG01016114
413152
Bacillota
TCC
Gly
>WENV183536825
OOAG01016119
304022
Bacillota
GCC
Gly
>WENV183536840
OOAG01017477
144652
Bacillota
GTC
Asp
>WENV183536854
OOAG01017951
338152
Bacillota
TTC
Glu
>WENV183536855
OOAG01017951
241432
Bacillota
TGT
Thr
>WENV183536865
OOAG01018052
272992
Bacillota
CTT
Lys
>WENV183536876
OOAG01018855
173314
Bacillota
GAT
Ile
>WENV183536881
OOAG01018898
202812
Bacillota
CAT
Met
>WENV183536887
OOAG01019217
235124
Bacillota
TGG
Pro
>WENV183536890
OOAG01019356
119513
Bacillota
CAA
Leu
>WENV183536910
OOAG01021082
247734
Bacillota
TGC
Ala
>WENV183536914
OOAG01021350
411547
Bacillota
CTG
Gln
>WENV183536916
OOAG01021588
245296
Bacillota
CCC
Gly
>WENV183536947
OOAG01023334
41154
Bacillota
TAA
Leu
>WENV183536948
OOAG01023410
235095
Bacillota
GGT
Thr
>WENV183536953
OOAG01024063
235150
Bacillota
TGC
Ala
>WENV183536955
OOAG01024064
235095
Bacillota
GGT
Thr
>WENV183536957
OOAG01024126
144599
Bacillota
GTC
Asp
>WENV183536958
OOAG01024126
302150
Bacillota
TAC
Val
>WENV183536998
OOAG01027546
235171
Bacillota
CCA
Trp
>WENV183537003
OOAG01028066
163753
Bacillota
TGG
Pro
>WENV183537009
OOAG01028066
338207
Bacillota
TTC
Glu
>WENV183537010
OOAG01028066
436750
Bacillota
TCC
Gly
>WENV183537013
OOAG01028066
235289
Bacillota
GTT
Asn
>WENV183537014
OOAG01028066
392638
Bacillota
TGT
Thr
>WENV183537015
OOAG01028066
235287
Bacillota
TTT
Lys
>WENV183537018
OOAG01028066
144766
Bacillota
CAT
Met
>WENV183537025
OOAG01028278
235095
Bacillota
GGT
Thr
>WENV183537030
OOAG01029291
235150
Bacillota
TGC
Ala
>WENV183537053
OOAG01031789
144610
Bacillota
GTG
His
>WENV183537059
OOAG01032291
304022
Bacillota
GCC
Gly
>WENV183537061
OOAG01032342
157838
Bacillota
GTC
Asp
>WENV183537068
OOAG01033045
148188
Bacillota
CCG
Arg
>WENV183537074
OOAG01033705
419877
Bacillota
TCC
Gly
>WENV183537083
OOAG01034402
272992
Bacillota
CTT
Lys
>WENV183537096
OOAG01035511
201704
Bacillota
GAT
Ile
>WENV183537097
OOAG01035511
246023
Bacillota
TGC
Ala
>WENV183537100
OOAG01035831
239832
Bacillota
TGT
Thr
>WENV183537123
OOAG01039710
148188
Bacillota
CCG
Arg
>WENV183537132
OOAG01040768
413152
Bacillota
TCC
Gly
>WENV183537161
OOAG01045110
152492
Bacillota
GGG
Pro
>WENV183537170
OOAG01046499
313164
Bacillota
TTT
Lys
>WENV183537179
OOAG01047498
235171
Bacillota
CCA
Trp
>WENV183537182
OOAG01048940
44859
Bacillota
AAG
Leu
>WENV183537189
OOAG01049887
316443
Bacillota
GTC
Asp
>WENV183537190
OOAG01049887
239020
Bacillota
TTT
Lys
>WENV183537196
OOAG01051671
238910
Bacillota
CTT
Lys
>WENV183537202
OOAG01052532
411547
Bacillota
CTG
Gln
>WENV183537229
OOAG01054938
338128
Bacillota
TTC
Glu
>WENV183537245
OOAG01058571
239080
Bacillota
CTG
Gln
>WENV183537254
OOAG01065272
235095
Bacillota
GGT
Thr
>WENV183537257
OOAG01065991
235127
Bacillota
TTT
Lys
>WENV183537273
OOAG01072970
45784
Bacillota
GGA
Ser
>WENV183537277
OOAG01075127
340265
Bacillota
GCC
Gly
>WENV183537281
OOAG01077798
155089
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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