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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183584155
OOCQ01003179
24650
Bacillota
TAA
Leu
>WENV183584197
OOCQ01004070
196621
Bacillota
GTC
Asp
>WENV183583787
OOCQ01000249
155958
Bacillota
GAT
Ile
>WENV183584201
OOCQ01004182
309417
Bacillota
GGC
Ala
>WENV183584025
OOCQ01001457
144612
Bacillota
TCT
Arg
>WENV183584457
OOCQ01022046
144612
Bacillota
TCT
Arg
>WENV183583713
OOCQ01000109
267649
Bacillota
TAC
Val
>WENV183584648
OOCQ01073094
156189
Bacillota
GAT
Ile
>WENV183584351
OOCQ01010942
235098
Bacillota
GAC
Val
>WENV183584122
OOCQ01002718
235098
Bacillota
GAC
Val
>WENV183584107
OOCQ01002519
235098
Bacillota
GAC
Val
>WENV183584046
OOCQ01001655
235098
Bacillota
GAC
Val
>WENV183583672
OOCQ01000054
338152
Bacillota
TTC
Glu
>WENV183584651
OOCQ01073230
237387
Bacillota
TGT
Thr
>WENV183584226
OOCQ01005106
44854
Bacillota
TGA
Ser
>WENV183583671
OOCQ01000054
235154
Bacillota
GTT
Asn
>WENV183584217
OOCQ01004722
304022
Bacillota
GCC
Gly
>WENV183583958
OOCQ01000994
304022
Bacillota
GCC
Gly
>WENV183583833
OOCQ01000422
59312
Bacillota
CAG
Leu
>WENV183584467
OOCQ01022148
238910
Bacillota
CTT
Lys
>WENV183584104
OOCQ01002352
338147
Bacillota
CTC
Glu
>WENV183584551
OOCQ01036356
235150
Bacillota
TGC
Ala
>WENV183584003
OOCQ01001235
293599
Bacillota
CTT
Lys
>WENV183583973
OOCQ01001058
235114
Bacillota
TTT
Lys
>WENV183583859
OOCQ01000516
429429
Bacillota
CCA
Trp
>WENV183584039
OOCQ01001604
41154
Bacillota
TAA
Leu
>WENV183584251
OOCQ01005926
11034
Bacillota
GGA
Ser
>WENV183584000
OOCQ01001223
11034
Bacillota
GGA
Ser
>WENV183584412
OOCQ01015191
37437
Bacillota
TAA
Leu
>WENV183584216
OOCQ01004722
235079
Bacillota
GAA
Phe
>WENV183584414
OOCQ01015191
81382
Bacillota
GAG
Leu
>WENV183584372
OOCQ01012260
245298
Bacillota
CGG
Pro
>WENV183584303
OOCQ01008097
245298
Bacillota
CGG
Pro
>WENV183583936
OOCQ01000869
245298
Bacillota
CGG
Pro
>WENV183583951
OOCQ01000965
37269
Bacillota
TGA
Ser
>WENV183583776
OOCQ01000240
169968
Bacillota
CAT
Met
>WENV183584646
OOCQ01072263
201704
Bacillota
GAT
Ile
>WENV183584275
OOCQ01007050
144599
Bacillota
GTC
Asp
>WENV183584418
OOCQ01015655
100326
Bacillota
GTA
Tyr
>WENV183583971
OOCQ01001058
144610
Bacillota
GTG
His
>WENV183584371
OOCQ01012260
411547
Bacillota
CTG
Gln
>WENV183584302
OOCQ01008097
411547
Bacillota
CTG
Gln
>WENV183584224
OOCQ01005064
411547
Bacillota
CTG
Gln
>WENV183584084
OOCQ01002032
411547
Bacillota
CTG
Gln
>WENV183583935
OOCQ01000869
411547
Bacillota
CTG
Gln
>WENV183584350
OOCQ01010879
235095
Bacillota
GGT
Thr
>WENV183584328
OOCQ01009496
96694
Bacillota
TAG
Leu
>WENV183584117
OOCQ01002648
411549
Bacillota
TTG
Gln
>WENV183583757
OOCQ01000197
235142
Bacillota
CTT
Lys
>WENV183584305
OOCQ01008120
148188
Bacillota
CCG
Arg
>WENV183584257
OOCQ01006385
148188
Bacillota
CCG
Arg
>WENV183584363
OOCQ01011577
80612
Bacillota
GTA
Tyr
>WENV183584319
OOCQ01008881
163943
Bacillota
GTC
Asp
>WENV183584335
OOCQ01009980
298620
Bacillota
CAT
Met
>WENV183584362
OOCQ01011576
235124
Bacillota
TGG
Pro
>WENV183584206
OOCQ01004395
235124
Bacillota
TGG
Pro
>WENV183584183
OOCQ01003585
338129
Bacillota
TGT
Thr
>WENV183584178
OOCQ01003501
338129
Bacillota
TGT
Thr
>WENV183584017
OOCQ01001335
338129
Bacillota
TGT
Thr
>WENV183584148
OOCQ01003075
144583
Bacillota
ACG
Arg
>WENV183584453
OOCQ01021447
419877
Bacillota
TCC
Gly
>WENV183584196
OOCQ01004070
235171
Bacillota
CCA
Trp
>WENV183584386
OOCQ01012942
238974
Bacillota
GAA
Phe
>WENV183584121
OOCQ01002689
144621
Bacillota
GTT
Asn
>WENV183583891
OOCQ01000634
235113
Bacillota
GAA
Phe
>WENV183584304
OOCQ01008116
58712
Bacillota
CAG
Leu
>WENV183584220
OOCQ01004835
58712
Bacillota
CAG
Leu
>WENV183584326
OOCQ01009170
245296
Bacillota
CCC
Gly
>WENV183584184
OOCQ01003589
245296
Bacillota
CCC
Gly
>WENV183584566
OOCQ01040525
299139
Bacillota
TGC
Ala
>WENV183583867
OOCQ01000531
144594
Bacillota
CAC
Val
>WENV183583746
OOCQ01000163
95563
Bacillota
GTA
Tyr
>WENV183584637
OOCQ01065758
338127
Bacillota
TTG
Gln
>WENV183584153
OOCQ01003156
414486
Bacillota
CCC
Gly
>WENV183584413
OOCQ01015191
81598
Bacillota
CAG
Leu
>WENV183584388
OOCQ01012992
114075
Bacillota
TAG
Leu
>WENV183584270
OOCQ01006863
384950
Bacillota
GCC
Gly
>WENV183584649
OOCQ01073230
146770
Bacillota
TTC
Glu
>WENV183584074
OOCQ01001956
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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