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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
139 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183585482
OOCS01000005
338147
Bacillota
CTC
Glu
>WENV183585483
OOCS01000005
338147
Bacillota
CTC
Glu
>WENV183585484
OOCS01000005
338147
Bacillota
CTC
Glu
>WENV183585558
OOCS01000045
149041
Bacillota
GTC
Asp
>WENV183585560
OOCS01000045
239832
Bacillota
TGT
Thr
>WENV183585593
OOCS01000079
144621
Bacillota
GTT
Asn
>WENV183585596
OOCS01000080
338149
Bacillota
CTC
Glu
>WENV183585597
OOCS01000080
144621
Bacillota
GTT
Asn
>WENV183585612
OOCS01000094
235095
Bacillota
GGT
Thr
>WENV183585613
OOCS01000094
196621
Bacillota
GTC
Asp
>WENV183585614
OOCS01000094
235095
Bacillota
GGT
Thr
>WENV183585629
OOCS01000115
411547
Bacillota
CTG
Gln
>WENV183585636
OOCS01000126
44854
Bacillota
TGA
Ser
>WENV183585637
OOCS01000126
4624
Bacillota
GCT
Ser
>WENV183585640
OOCS01000127
235079
Bacillota
GAA
Phe
>WENV183585641
OOCS01000127
304022
Bacillota
GCC
Gly
>WENV183585648
OOCS01000131
293599
Bacillota
CTT
Lys
>WENV183585649
OOCS01000133
338149
Bacillota
CTC
Glu
>WENV183585650
OOCS01000133
144621
Bacillota
GTT
Asn
>WENV183585657
OOCS01000137
313454
Bacillota
GAA
Phe
>WENV183585679
OOCS01000157
144594
Bacillota
CAC
Val
>WENV183585680
OOCS01000157
58712
Bacillota
CAG
Leu
>WENV183585689
OOCS01000168
58712
Bacillota
CAG
Leu
>WENV183585691
OOCS01000180
338147
Bacillota
CTC
Glu
>WENV183585697
OOCS01000198
411547
Bacillota
CTG
Gln
>WENV183585707
OOCS01000211
59312
Bacillota
CAG
Leu
>WENV183585743
OOCS01000248
11034
Bacillota
GGA
Ser
>WENV183585754
OOCS01000268
235098
Bacillota
GAC
Val
>WENV183585759
OOCS01000285
239832
Bacillota
TGT
Thr
>WENV183585761
OOCS01000285
149041
Bacillota
GTC
Asp
>WENV183585765
OOCS01000288
304022
Bacillota
GCC
Gly
>WENV183585766
OOCS01000288
235117
Bacillota
TAC
Val
>WENV183585768
OOCS01000288
235079
Bacillota
GAA
Phe
>WENV183585778
OOCS01000304
338128
Bacillota
TTC
Glu
>WENV183585779
OOCS01000306
411549
Bacillota
TTG
Gln
>WENV183585780
OOCS01000306
411547
Bacillota
CTG
Gln
>WENV183585781
OOCS01000306
245298
Bacillota
CGG
Pro
>WENV183585786
OOCS01000324
80612
Bacillota
GTA
Tyr
>WENV183585796
OOCS01000346
144612
Bacillota
TCT
Arg
>WENV183585801
OOCS01000353
313164
Bacillota
TTT
Lys
>WENV183585805
OOCS01000353
144672
Bacillota
TCT
Arg
>WENV183585808
OOCS01000357
144621
Bacillota
GTT
Asn
>WENV183585830
OOCS01000387
144612
Bacillota
TCT
Arg
>WENV183585833
OOCS01000390
11034
Bacillota
GGA
Ser
>WENV183585851
OOCS01000481
309417
Bacillota
GGC
Ala
>WENV183585858
OOCS01000513
144672
Bacillota
TCT
Arg
>WENV183585860
OOCS01000513
313164
Bacillota
TTT
Lys
>WENV183585864
OOCS01000527
338128
Bacillota
TTC
Glu
>WENV183585870
OOCS01000575
245296
Bacillota
CCC
Gly
>WENV183585876
OOCS01000608
235142
Bacillota
CTT
Lys
>WENV183585879
OOCS01000614
304022
Bacillota
GCC
Gly
>WENV183585880
OOCS01000614
196621
Bacillota
GTC
Asp
>WENV183585881
OOCS01000614
304022
Bacillota
GCC
Gly
>WENV183585883
OOCS01000614
411549
Bacillota
TTG
Gln
>WENV183585892
OOCS01000642
235171
Bacillota
CCA
Trp
>WENV183585893
OOCS01000642
196621
Bacillota
GTC
Asp
>WENV183585894
OOCS01000642
235095
Bacillota
GGT
Thr
>WENV183585895
OOCS01000642
235095
Bacillota
GGT
Thr
>WENV183585897
OOCS01000657
309417
Bacillota
GGC
Ala
>WENV183585898
OOCS01000663
37213
Bacillota
TGA
Ser
>WENV183585899
OOCS01000663
37213
Bacillota
TGA
Ser
>WENV183585912
OOCS01000720
309417
Bacillota
GGC
Ala
>WENV183585915
OOCS01000757
235124
Bacillota
TGG
Pro
>WENV183585917
OOCS01000772
37269
Bacillota
TGA
Ser
>WENV183585919
OOCS01000789
235124
Bacillota
TGG
Pro
>WENV183585920
OOCS01000795
429429
Bacillota
CCA
Trp
>WENV183585927
OOCS01000851
44859
Bacillota
AAG
Leu
>WENV183585928
OOCS01000851
59312
Bacillota
CAG
Leu
>WENV183585937
OOCS01000892
429443
Bacillota
GCA
Cys
>WENV183585947
OOCS01000929
144594
Bacillota
CAC
Val
>WENV183585948
OOCS01000962
338149
Bacillota
CTC
Glu
>WENV183585949
OOCS01000962
272992
Bacillota
CTT
Lys
>WENV183585952
OOCS01000976
272992
Bacillota
CTT
Lys
>WENV183585967
OOCS01001065
235079
Bacillota
GAA
Phe
>WENV183585972
OOCS01001100
313454
Bacillota
GAA
Phe
>WENV183585980
OOCS01001126
411547
Bacillota
CTG
Gln
>WENV183585981
OOCS01001126
245298
Bacillota
CGG
Pro
>WENV183585988
OOCS01001176
235079
Bacillota
GAA
Phe
>WENV183585990
OOCS01001182
338128
Bacillota
TTC
Glu
>WENV183585992
OOCS01001212
95563
Bacillota
GTA
Tyr
>WENV183585994
OOCS01001218
304022
Bacillota
GCC
Gly
>WENV183586002
OOCS01001268
80612
Bacillota
GTA
Tyr
>WENV183586008
OOCS01001330
304022
Bacillota
GCC
Gly
>WENV183586009
OOCS01001330
235117
Bacillota
TAC
Val
>WENV183586010
OOCS01001330
196621
Bacillota
GTC
Asp
>WENV183586011
OOCS01001330
235079
Bacillota
GAA
Phe
>WENV183586012
OOCS01001330
304022
Bacillota
GCC
Gly
>WENV183586030
OOCS01001528
235114
Bacillota
TTT
Lys
>WENV183586031
OOCS01001540
147684
Bacillota
ACG
Arg
>WENV183586037
OOCS01001596
235113
Bacillota
GAA
Phe
>WENV183586050
OOCS01001752
338129
Bacillota
TGT
Thr
>WENV183586060
OOCS01001923
272992
Bacillota
CTT
Lys
>WENV183586061
OOCS01001958
58712
Bacillota
CAG
Leu
>WENV183586063
OOCS01001999
313164
Bacillota
TTT
Lys
>WENV183586065
OOCS01002059
44859
Bacillota
AAG
Leu
>WENV183586068
OOCS01002084
148188
Bacillota
CCG
Arg
>WENV183586080
OOCS01002243
148188
Bacillota
CCG
Arg
>WENV183586081
OOCS01002247
44854
Bacillota
TGA
Ser
>WENV183586082
OOCS01002247
4624
Bacillota
GCT
Ser
>WENV183586089
OOCS01002463
11034
Bacillota
GGA
Ser
>WENV183586104
OOCS01002885
235154
Bacillota
GTT
Asn
>WENV183586106
OOCS01002885
429443
Bacillota
GCA
Cys
>WENV183586108
OOCS01002992
235098
Bacillota
GAC
Val
>WENV183586114
OOCS01003210
338131
Bacillota
GCC
Gly
>WENV183586132
OOCS01003654
58712
Bacillota
CAG
Leu
>WENV183586141
OOCS01003965
299139
Bacillota
TGC
Ala
>WENV183586163
OOCS01004840
338129
Bacillota
TGT
Thr
>WENV183586165
OOCS01004854
235114
Bacillota
TTT
Lys
>WENV183586167
OOCS01004997
157635
Bacillota
TCT
Arg
>WENV183586168
OOCS01004997
144610
Bacillota
GTG
His
>WENV183586169
OOCS01004997
340802
Bacillota
TTG
Gln
>WENV183586178
OOCS01005241
235098
Bacillota
GAC
Val
>WENV183586184
OOCS01005402
316443
Bacillota
GTC
Asp
>WENV183586186
OOCS01005402
109476
Bacillota
TAG
Leu
>WENV183586189
OOCS01005462
298620
Bacillota
CAT
Met
>WENV183586201
OOCS01006288
298639
Bacillota
GTT
Asn
>WENV183586208
OOCS01006454
162445
Bacillota
CAT
Met
>WENV183586214
OOCS01007142
411547
Bacillota
CTG
Gln
>WENV183586215
OOCS01007206
309417
Bacillota
GGC
Ala
>WENV183586224
OOCS01007838
152492
Bacillota
GGG
Pro
>WENV183586234
OOCS01009148
411549
Bacillota
TTG
Gln
>WENV183586237
OOCS01009278
235098
Bacillota
GAC
Val
>WENV183586252
OOCS01011048
287000
Bacillota
GTT
Asn
>WENV183586254
OOCS01011419
267649
Bacillota
TAC
Val
>WENV183586268
OOCS01014162
235137
Bacillota
TGC
Ala
>WENV183586269
OOCS01014258
144672
Bacillota
TCT
Arg
>WENV183586280
OOCS01018157
411547
Bacillota
CTG
Gln
>WENV183586281
OOCS01018157
245298
Bacillota
CGG
Pro
>WENV183586284
OOCS01018599
368876
Bacillota
GCC
Gly
>WENV183586291
OOCS01019095
37269
Bacillota
TGA
Ser
>WENV183586301
OOCS01019696
237846
Bacillota
GCC
Gly
>WENV183586341
OOCS01028432
144652
Bacillota
GTC
Asp
>WENV183586347
OOCS01029610
144621
Bacillota
GTT
Asn
>WENV183586353
OOCS01031470
341763
Bacillota
CTC
Glu
>WENV183586360
OOCS01033378
144652
Bacillota
GTC
Asp
>WENV183586370
OOCS01035879
338129
Bacillota
TGT
Thr
>WENV183586375
OOCS01036901
243613
Bacillota
GTG
His
>WENV183586376
OOCS01036901
343027
Bacillota
TTG
Gln
>WENV183586377
OOCS01036901
243647
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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