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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
165 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183611655
OODT01000717
196621
Bacillota
GTC
Asp
>WENV183611758
OODT01001054
196621
Bacillota
GTC
Asp
>WENV183611846
OODT01001570
196621
Bacillota
GTC
Asp
>WENV183611932
OODT01002364
196621
Bacillota
GTC
Asp
>WENV183611608
OODT01000601
309417
Bacillota
GGC
Ala
>WENV183611678
OODT01000785
309417
Bacillota
GGC
Ala
>WENV183612236
OODT01023950
309417
Bacillota
GGC
Ala
>WENV183611734
OODT01000973
144612
Bacillota
TCT
Arg
>WENV183611451
OODT01000271
154063
Bacillota
CGG
Pro
>WENV183611709
OODT01000933
154063
Bacillota
CGG
Pro
>WENV183611856
OODT01001655
267649
Bacillota
TAC
Val
>WENV183611858
OODT01001655
267649
Bacillota
TAC
Val
>WENV183612028
OODT01003949
267649
Bacillota
TAC
Val
>WENV183611798
OODT01001307
235134
Bacillota
GAA
Phe
>WENV183612001
OODT01003393
235098
Bacillota
GAC
Val
>WENV183611841
OODT01001556
235098
Bacillota
GAC
Val
>WENV183611887
OODT01001836
338152
Bacillota
TTC
Glu
>WENV183611884
OODT01001836
338152
Bacillota
TTC
Glu
>WENV183612242
OODT01025514
118788
Bacillota
TAG
Leu
>WENV183612032
OODT01004040
148239
Bacillota
TCT
Arg
>WENV183611952
OODT01002543
44854
Bacillota
TGA
Ser
>WENV183611992
OODT01003236
304022
Bacillota
GCC
Gly
>WENV183611965
OODT01002768
304022
Bacillota
GCC
Gly
>WENV183611933
OODT01002364
304022
Bacillota
GCC
Gly
>WENV183611931
OODT01002364
304022
Bacillota
GCC
Gly
>WENV183611657
OODT01000717
304022
Bacillota
GCC
Gly
>WENV183611653
OODT01000717
304022
Bacillota
GCC
Gly
>WENV183611889
OODT01001842
429443
Bacillota
GCA
Cys
>WENV183612173
OODT01014654
302150
Bacillota
TAC
Val
>WENV183611815
OODT01001441
302150
Bacillota
TAC
Val
>WENV183611337
OODT01000138
59312
Bacillota
CAG
Leu
>WENV183611232
OODT01000064
59312
Bacillota
CAG
Leu
>WENV183611221
OODT01000055
59312
Bacillota
CAG
Leu
>WENV183612204
OODT01018296
238910
Bacillota
CTT
Lys
>WENV183611136
OODT01000012
338147
Bacillota
CTC
Glu
>WENV183611135
OODT01000012
338147
Bacillota
CTC
Glu
>WENV183611134
OODT01000012
338147
Bacillota
CTC
Glu
>WENV183612197
OODT01016419
235150
Bacillota
TGC
Ala
>WENV183612069
OODT01004874
235150
Bacillota
TGC
Ala
>WENV183612149
OODT01012416
235137
Bacillota
TGC
Ala
>WENV183611945
OODT01002475
340802
Bacillota
TTG
Gln
>WENV183611700
OODT01000914
340802
Bacillota
TTG
Gln
>WENV183611618
OODT01000620
340802
Bacillota
TTG
Gln
>WENV183611427
OODT01000240
293599
Bacillota
CTT
Lys
>WENV183612025
OODT01003936
144668
Bacillota
GTC
Asp
>WENV183611208
OODT01000046
144668
Bacillota
GTC
Asp
>WENV183611808
OODT01001385
429429
Bacillota
CCA
Trp
>WENV183611743
OODT01000991
429429
Bacillota
CCA
Trp
>WENV183611736
OODT01000977
429429
Bacillota
CCA
Trp
>WENV183611630
OODT01000642
429429
Bacillota
CCA
Trp
>WENV183611550
OODT01000487
429429
Bacillota
CCA
Trp
>WENV183611303
OODT01000106
429429
Bacillota
CCA
Trp
>WENV183612201
OODT01017223
379268
Bacillota
TTC
Glu
>WENV183612162
OODT01014096
379268
Bacillota
TTC
Glu
>WENV183611640
OODT01000685
313454
Bacillota
GAA
Phe
>WENV183611595
OODT01000574
313454
Bacillota
GAA
Phe
>WENV183611573
OODT01000536
313454
Bacillota
GAA
Phe
>WENV183611300
OODT01000106
313454
Bacillota
GAA
Phe
>WENV183611235
OODT01000065
313454
Bacillota
GAA
Phe
>WENV183612027
OODT01003936
41154
Bacillota
TAA
Leu
>WENV183611565
OODT01000527
41154
Bacillota
TAA
Leu
>WENV183611209
OODT01000046
41154
Bacillota
TAA
Leu
>WENV183612074
OODT01005067
11034
Bacillota
GGA
Ser
>WENV183611781
OODT01001161
11034
Bacillota
GGA
Ser
>WENV183611830
OODT01001482
235117
Bacillota
TAC
Val
>WENV183611654
OODT01000717
235117
Bacillota
TAC
Val
>WENV183612154
OODT01013761
247057
Bacillota
TGC
Ala
>WENV183612091
OODT01005861
247057
Bacillota
TGC
Ala
>WENV183612167
OODT01014096
392638
Bacillota
TGT
Thr
>WENV183611964
OODT01002768
235079
Bacillota
GAA
Phe
>WENV183611930
OODT01002364
235079
Bacillota
GAA
Phe
>WENV183611656
OODT01000717
235079
Bacillota
GAA
Phe
>WENV183611902
OODT01002001
338149
Bacillota
CTC
Glu
>WENV183611849
OODT01001578
338149
Bacillota
CTC
Glu
>WENV183611823
OODT01001456
245298
Bacillota
CGG
Pro
>WENV183611753
OODT01001028
245298
Bacillota
CGG
Pro
>WENV183612224
OODT01022219
37269
Bacillota
TGA
Ser
>WENV183611647
OODT01000708
37269
Bacillota
TGA
Ser
>WENV183611488
OODT01000342
37269
Bacillota
TGA
Ser
>WENV183612103
OODT01007627
340131
Bacillota
GTT
Asn
>WENV183611924
OODT01002287
155089
Bacillota
CAT
Met
>WENV183611218
OODT01000052
155089
Bacillota
CAT
Met
>WENV183612047
OODT01004423
287000
Bacillota
GTT
Asn
>WENV183611886
OODT01001836
287000
Bacillota
GTT
Asn
>WENV183611636
OODT01000673
173810
Bacillota
CAT
Met
>WENV183611530
OODT01000428
162445
Bacillota
CAT
Met
>WENV183611528
OODT01000428
162445
Bacillota
CAT
Met
>WENV183611458
OODT01000287
152492
Bacillota
GGG
Pro
>WENV183612172
OODT01014654
144599
Bacillota
GTC
Asp
>WENV183611814
OODT01001441
144599
Bacillota
GTC
Asp
>WENV183611768
OODT01001105
144599
Bacillota
GTC
Asp
>WENV183612175
OODT01014654
100326
Bacillota
GTA
Tyr
>WENV183611589
OODT01000568
100326
Bacillota
GTA
Tyr
>WENV183611512
OODT01000394
100326
Bacillota
GTA
Tyr
>WENV183611413
OODT01000229
100326
Bacillota
GTA
Tyr
>WENV183611323
OODT01000127
100326
Bacillota
GTA
Tyr
>WENV183611170
OODT01000026
100326
Bacillota
GTA
Tyr
>WENV183612033
OODT01004040
144610
Bacillota
GTG
His
>WENV183611617
OODT01000620
144610
Bacillota
GTG
His
>WENV183611143
OODT01000014
240017
Bacillota
GCC
Gly
>WENV183611852
OODT01001582
411547
Bacillota
CTG
Gln
>WENV183611822
OODT01001456
411547
Bacillota
CTG
Gln
>WENV183611752
OODT01001028
411547
Bacillota
CTG
Gln
>WENV183611690
OODT01000866
411547
Bacillota
CTG
Gln
>WENV183611978
OODT01002843
147684
Bacillota
ACG
Arg
>WENV183611404
OODT01000219
147684
Bacillota
ACG
Arg
>WENV183611210
OODT01000046
147684
Bacillota
ACG
Arg
>WENV183611953
OODT01002543
4624
Bacillota
GCT
Ser
>WENV183611888
OODT01001836
412387
Bacillota
GCA
Cys
>WENV183611885
OODT01001836
412387
Bacillota
GCA
Cys
>WENV183612202
OODT01017223
411584
Bacillota
TCC
Gly
>WENV183612163
OODT01014096
411584
Bacillota
TCC
Gly
>WENV183612164
OODT01014096
313104
Bacillota
TAC
Val
>WENV183611847
OODT01001570
235095
Bacillota
GGT
Thr
>WENV183611842
OODT01001559
235095
Bacillota
GGT
Thr
>WENV183611759
OODT01001054
235095
Bacillota
GGT
Thr
>WENV183611757
OODT01001054
235095
Bacillota
GGT
Thr
>WENV183612166
OODT01014096
235289
Bacillota
GTT
Asn
>WENV183611937
OODT01002428
411549
Bacillota
TTG
Gln
>WENV183611871
OODT01001717
411549
Bacillota
TTG
Gln
>WENV183611351
OODT01000158
245386
Bacillota
CCA
Trp
>WENV183611996
OODT01003360
148188
Bacillota
CCG
Arg
>WENV183611988
OODT01003161
148188
Bacillota
CCG
Arg
>WENV183611834
OODT01001505
298639
Bacillota
GTT
Asn
>WENV183611935
OODT01002364
80612
Bacillota
GTA
Tyr
>WENV183611525
OODT01000424
256380
Bacillota
>WENV183611352
OODT01000159
256380
Bacillota
>WENV183611537
OODT01000449
235127
Bacillota
TTT
Lys
>WENV183612165
OODT01014096
163943
Bacillota
GTC
Asp
>WENV183611843
OODT01001562
298620
Bacillota
CAT
Met
>WENV183612008
OODT01003541
235124
Bacillota
TGG
Pro
>WENV183611821
OODT01001455
235124
Bacillota
TGG
Pro
>WENV183611998
OODT01003374
338129
Bacillota
TGT
Thr
>WENV183611862
OODT01001672
338129
Bacillota
TGT
Thr
>WENV183611890
OODT01001848
144583
Bacillota
ACG
Arg
>WENV183611863
OODT01001687
144583
Bacillota
ACG
Arg
>WENV183611906
OODT01002041
144652
Bacillota
GTC
Asp
>WENV183612009
OODT01003573
247734
Bacillota
TGC
Ala
>WENV183611336
OODT01000138
419877
Bacillota
TCC
Gly
>WENV183611233
OODT01000065
419877
Bacillota
TCC
Gly
>WENV183611845
OODT01001570
235171
Bacillota
CCA
Trp
>WENV183611591
OODT01000568
238974
Bacillota
GAA
Phe
>WENV183611415
OODT01000229
238974
Bacillota
GAA
Phe
>WENV183611903
OODT01002001
144621
Bacillota
GTT
Asn
>WENV183611891
OODT01001881
144621
Bacillota
GTT
Asn
>WENV183611850
OODT01001578
144621
Bacillota
GTT
Asn
>WENV183611607
OODT01000601
144621
Bacillota
GTT
Asn
>WENV183612120
OODT01009127
58712
Bacillota
CAG
Leu
>WENV183611812
OODT01001437
58712
Bacillota
CAG
Leu
>WENV183611783
OODT01001176
58712
Bacillota
CAG
Leu
>WENV183611703
OODT01000917
58712
Bacillota
CAG
Leu
>WENV183612158
OODT01014031
21693
Bacillota
GCT
Ser
>WENV183612244
OODT01025514
144762
Bacillota
TCT
Arg
>WENV183611900
OODT01001989
245296
Bacillota
CCC
Gly
>WENV183612241
OODT01024875
272992
Bacillota
CTT
Lys
>WENV183612143
OODT01011664
272992
Bacillota
CTT
Lys
>WENV183612136
OODT01010589
272992
Bacillota
CTT
Lys
>WENV183611628
OODT01000631
272992
Bacillota
CTT
Lys
>WENV183611616
OODT01000620
157635
Bacillota
TCT
Arg
>WENV183612070
OODT01004903
299139
Bacillota
TGC
Ala
>WENV183611985
OODT01003089
144594
Bacillota
CAC
Val
>WENV183611855
OODT01001615
144594
Bacillota
CAC
Val
>WENV183611708
OODT01000929
414486
Bacillota
CCC
Gly
>WENV183611707
OODT01000928
114075
Bacillota
TAG
Leu
>WENV183611252
OODT01000080
114075
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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