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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170657544
JTFP01000893
681840
Campylobacterota
GTT
Asn
>WENV170658407
JTFP01105228
681840
Campylobacterota
GTT
Asn
>WENV170657683
JTFP01009524
451605
Campylobacterota
TAC
Val
>WENV170657954
JTFP01037222
451605
Campylobacterota
TAC
Val
>WENV170658506
JTFP01128325
451605
Campylobacterota
TAC
Val
>WENV170658554
JTFP01141925
451605
Campylobacterota
TAC
Val
>WENV170657784
JTFP01019403
86932
Campylobacterota
GGA
Ser
>WENV170657821
JTFP01023065
671184
Campylobacterota
TTC
Glu
>WENV170658410
JTFP01106822
653526
Campylobacterota
GGT
Thr
>WENV170657959
JTFP01037463
289690
Campylobacterota
TCC
Gly
>WENV170657961
JTFP01037463
289690
Campylobacterota
TCC
Gly
>WENV170658138
JTFP01058968
289690
Campylobacterota
TCC
Gly
>WENV170658345
JTFP01090478
289690
Campylobacterota
TCC
Gly
>WENV170658642
JTFP01170184
289690
Campylobacterota
TCC
Gly
>WENV170658141
JTFP01058968
289693
Campylobacterota
TGT
Thr
>WENV170658343
JTFP01090478
289693
Campylobacterota
TGT
Thr
>WENV170658625
JTFP01164019
289693
Campylobacterota
TGT
Thr
>WENV170657702
JTFP01011293
537134
Campylobacterota
CCA
Trp
>WENV170658497
JTFP01124295
537799
Campylobacterota
CCA
Trp
>WENV170658518
JTFP01130482
270785
Campylobacterota
GAT
Ile
>WENV170658344
JTFP01090478
183816
Campylobacterota
GTA
Tyr
>WENV170657649
JTFP01006569
653628
Campylobacterota
GGT
Thr
>WENV170658112
JTFP01055848
73996
Campylobacterota
TGA
Ser
>WENV170658035
JTFP01047762
87866
Campylobacterota
GGA
Ser
>WENV170657822
JTFP01023065
482077
Campylobacterota
TAC
Val
>WENV170657956
JTFP01037463
298530
Campylobacterota
GTG
His
>WENV170658624
JTFP01164019
277763
Campylobacterota
CAT
Met
>WENV170657896
JTFP01031467
671343
Campylobacterota
GTT
Asn
>WENV170657897
JTFP01031467
671343
Campylobacterota
GTT
Asn
>WENV170657898
JTFP01031467
671343
Campylobacterota
GTT
Asn
>WENV170658142
JTFP01058968
686327
Campylobacterota
TTG
Gln
>WENV170658113
JTFP01055848
482380
Campylobacterota
GCA
Cys
>WENV170657823
JTFP01023065
340261
Campylobacterota
GTC
Asp
>WENV170657820
JTFP01023065
482382
Campylobacterota
TTT
Lys
>WENV170658139
JTFP01058968
289691
Campylobacterota
CAT
Met
>WENV170658623
JTFP01164019
289691
Campylobacterota
CAT
Met
>WENV170658140
JTFP01058968
270782
Campylobacterota
CAT
Met
>WENV170657957
JTFP01037463
298531
Campylobacterota
TCT
Arg
>WENV170657960
JTFP01037463
298531
Campylobacterota
TCT
Arg
>WENV170657955
JTFP01037463
241575
Campylobacterota
TGG
Pro
>WENV170658342
JTFP01090478
482078
Campylobacterota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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