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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170346184
CETG01019372
95633
Gammaproteobacteria
GTA
Tyr
>WENV170346018
CETG01007986
20025
Gammaproteobacteria
GGA
Ser
>WENV170348788
CETG01409037
235887
Gammaproteobacteria
GTG
His
>WENV170347889
CETG01169367
338234
Gammaproteobacteria
GAC
Val
>WENV170348863
CETG01426566
144810
Gammaproteobacteria
TCG
Arg
>WENV170346407
CETG01037087
282537
Gammaproteobacteria
TTC
Glu
>WENV170346808
CETG01071663
279385
Gammaproteobacteria
TTT
Lys
>WENV170346435
CETG01039187
235341
Gammaproteobacteria
TGT
Thr
>WENV170347457
CETG01137266
147779
Gammaproteobacteria
CAT
Met
>WENV170346306
CETG01028766
149035
Gammaproteobacteria
CCG
Arg
>WENV170347660
CETG01154807
283668
Gammaproteobacteria
TTT
Lys
>WENV170346701
CETG01060336
58822
Gammaproteobacteria
CAA
Leu
>WENV170347174
CETG01109437
24435
Gammaproteobacteria
CGA
Ser
>WENV170348226
CETG01189245
144812
Gammaproteobacteria
GGG
Pro
>WENV170346095
CETG01012786
290337
Gammaproteobacteria
TAC
Val
>WENV170347921
CETG01171856
23369
Gammaproteobacteria
GCT
Ser
>WENV170347325
CETG01124797
45109
Gammaproteobacteria
GGA
Ser
>WENV170348101
CETG01183142
147114
Gammaproteobacteria
CCT
Arg
>WENV170346819
CETG01073195
46594
Gammaproteobacteria
GGA
Ser
>WENV170348035
CETG01179137
145367
Gammaproteobacteria
GGG
Pro
>WENV170347062
CETG01097023
99112
Gammaproteobacteria
TAG
Leu
>WENV170348819
CETG01415970
145196
Gammaproteobacteria
CAT
Met
>WENV170347132
CETG01103289
276072
Gammaproteobacteria
>WENV170348897
CETG01429772
197713
Gammaproteobacteria
CAT
Met
>WENV170347845
CETG01166624
59172
Gammaproteobacteria
CAA
Leu
>WENV170348899
CETG01430029
373590
Gammaproteobacteria
TTG
Gln
>WENV170346143
CETG01015978
149036
Gammaproteobacteria
CCA
Trp
>WENV170346109
CETG01013778
149036
Gammaproteobacteria
CCA
Trp
>WENV170346753
CETG01065916
338534
Gammaproteobacteria
TCC
Gly
>WENV170348629
CETG01350393
16284
Gammaproteobacteria
TGA
Ser
>WENV170348285
CETG01190953
44873
Gammaproteobacteria
TGA
Ser
>WENV170348052
CETG01180272
145369
Gammaproteobacteria
CGG
Pro
>WENV170346438
CETG01039187
235344
Gammaproteobacteria
GGT
Thr
>WENV170347408
CETG01131766
235339
Gammaproteobacteria
GTG
His
>WENV170348564
CETG01326298
147111
Gammaproteobacteria
CCG
Arg
>WENV170346784
CETG01068327
268812
Gammaproteobacteria
GTT
Asn
>WENV170347409
CETG01131766
103042
Gammaproteobacteria
TAG
Leu
>WENV170347836
CETG01165787
113688
Gammaproteobacteria
GTA
Tyr
>WENV170348895
CETG01429561
236973
Gammaproteobacteria
GTT
Asn
>WENV170346612
CETG01053078
145713
Gammaproteobacteria
CAT
Met
>WENV170346854
CETG01076112
412373
Gammaproteobacteria
GCA
Cys
>WENV170348741
CETG01394773
425813
Gammaproteobacteria
GCA
Cys
>WENV170347950
CETG01173929
146807
Gammaproteobacteria
TCT
Arg
>WENV170347035
CETG01093690
59658
Gammaproteobacteria
CAA
Leu
>WENV170346294
CETG01027928
147120
Gammaproteobacteria
CGG
Pro
>WENV170347133
CETG01103365
182592
Gammaproteobacteria
GAC
Val
>WENV170347550
CETG01145966
149037
Gammaproteobacteria
GAC
Val
>WENV170347537
CETG01145245
149037
Gammaproteobacteria
GAC
Val
>WENV170346165
CETG01017749
149037
Gammaproteobacteria
GAC
Val
>WENV170348026
CETG01178791
45411
Gammaproteobacteria
GGA
Ser
>WENV170347386
CETG01129973
147112
Gammaproteobacteria
GGG
Pro
>WENV170346000
CETG01006129
266766
Gammaproteobacteria
TGT
Thr
>WENV170348247
CETG01189775
58746
Gammaproteobacteria
CAG
Leu
>WENV170348321
CETG01191598
144813
Gammaproteobacteria
CCT
Arg
>WENV170346509
CETG01046030
173617
Gammaproteobacteria
GTC
Asp
>WENV170347407
CETG01131766
175414
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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