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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170781839
MAAC01001860
144973
Alphaproteobacteria
CCT
Arg
>WENV170781857
MAAC01002574
187569
Alphaproteobacteria
CCG
Arg
>WENV170781879
MAAC01003187
113716
Alphaproteobacteria
CAA
Leu
>WENV170781909
MAAC01004227
147334
Alphaproteobacteria
CAT
Met
>WENV170781910
MAAC01004239
144973
Alphaproteobacteria
CCT
Arg
>WENV170781936
MAAC01004759
144973
Alphaproteobacteria
CCT
Arg
>WENV170782021
MAAC01006462
412477
Alphaproteobacteria
GCA
Cys
>WENV170782037
MAAC01006664
28682
Alphaproteobacteria
GGA
Ser
>WENV170782084
MAAC01008156
147088
Alphaproteobacteria
CCT
Arg
>WENV170782097
MAAC01008296
23672
Alphaproteobacteria
GCT
Ser
>WENV170782101
MAAC01008354
28682
Alphaproteobacteria
GGA
Ser
>WENV170782127
MAAC01009379
412279
Alphaproteobacteria
CCC
Gly
>WENV170782290
MAAC01009671
154227
Alphaproteobacteria
CAT
Met
>WENV170782291
MAAC01009671
28682
Alphaproteobacteria
GGA
Ser
>WENV170782293
MAAC01009671
162089
Alphaproteobacteria
TGG
Pro
>WENV170782294
MAAC01009671
59164
Alphaproteobacteria
GAG
Leu
>WENV170782302
MAAC01009671
23671
Alphaproteobacteria
CGA
Ser
>WENV170782309
MAAC01009674
319925
Alphaproteobacteria
TGT
Thr
>WENV170782316
MAAC01009677
187569
Alphaproteobacteria
CCG
Arg
>WENV170782328
MAAC01009695
80917
Alphaproteobacteria
CAG
Leu
>WENV170782342
MAAC01009704
192195
Alphaproteobacteria
GTC
Asp
>WENV170782344
MAAC01009708
147361
Alphaproteobacteria
GGG
Pro
>WENV170782371
MAAC01009734
59164
Alphaproteobacteria
GAG
Leu
>WENV170782382
MAAC01009744
59164
Alphaproteobacteria
GAG
Leu
>WENV170782385
MAAC01009744
113716
Alphaproteobacteria
CAA
Leu
>WENV170782386
MAAC01009744
381459
Alphaproteobacteria
CAC
Val
>WENV170782387
MAAC01009744
319095
Alphaproteobacteria
TAC
Val
>WENV170782390
MAAC01009744
338287
Alphaproteobacteria
GGT
Thr
>WENV170782391
MAAC01009744
23672
Alphaproteobacteria
GCT
Ser
>WENV170782393
MAAC01009745
147286
Alphaproteobacteria
CGG
Pro
>WENV170782395
MAAC01009745
238010
Alphaproteobacteria
TTT
Lys
>WENV170782399
MAAC01009746
147083
Alphaproteobacteria
GGG
Pro
>WENV170782401
MAAC01009746
113700
Alphaproteobacteria
>WENV170782402
MAAC01009746
338288
Alphaproteobacteria
TTC
Glu
>WENV170782403
MAAC01009746
148158
Alphaproteobacteria
ACG
Arg
>WENV170782404
MAAC01009746
435870
Alphaproteobacteria
GCA
Cys
>WENV170782407
MAAC01009746
319925
Alphaproteobacteria
TGT
Thr
>WENV170782411
MAAC01009746
147334
Alphaproteobacteria
CAT
Met
>WENV170782412
MAAC01009746
338282
Alphaproteobacteria
GTT
Asn
>WENV170782414
MAAC01009748
339723
Alphaproteobacteria
>WENV170782415
MAAC01009752
339722
Alphaproteobacteria
TTG
Gln
>WENV170782418
MAAC01009759
270451
Alphaproteobacteria
CGT
Thr
>WENV170782628
MAAC01010823
147361
Alphaproteobacteria
GGG
Pro
>WENV170782629
MAAC01010875
236256
Alphaproteobacteria
TAC
Val
>WENV170782986
MAAC01012569
23671
Alphaproteobacteria
CGA
Ser
>WENV170782988
MAAC01012579
113715
Alphaproteobacteria
TAG
Leu
>WENV170782990
MAAC01012597
412279
Alphaproteobacteria
CCC
Gly
>WENV170782991
MAAC01012619
338288
Alphaproteobacteria
TTC
Glu
>WENV170782992
MAAC01012627
338288
Alphaproteobacteria
TTC
Glu
>WENV170782994
MAAC01012641
412279
Alphaproteobacteria
CCC
Gly
>WENV170782996
MAAC01012676
80918
Alphaproteobacteria
GAG
Leu
>WENV170782998
MAAC01012678
236256
Alphaproteobacteria
TAC
Val
>WENV170782999
MAAC01012691
113716
Alphaproteobacteria
CAA
Leu
>WENV170783000
MAAC01012706
113700
Alphaproteobacteria
>WENV170783003
MAAC01012743
319925
Alphaproteobacteria
TGT
Thr
>WENV170783004
MAAC01012746
306070
Alphaproteobacteria
CCA
Trp
>WENV170783006
MAAC01012762
339722
Alphaproteobacteria
TTG
Gln
>WENV170783008
MAAC01012791
147083
Alphaproteobacteria
GGG
Pro
>WENV170783013
MAAC01012851
339723
Alphaproteobacteria
>WENV170783019
MAAC01012938
339606
Alphaproteobacteria
>WENV170783020
MAAC01012938
339606
Alphaproteobacteria
>WENV170783023
MAAC01012957
319925
Alphaproteobacteria
TGT
Thr
>WENV170783027
MAAC01013091
147334
Alphaproteobacteria
CAT
Met
>WENV170783031
MAAC01013129
307050
Alphaproteobacteria
GGC
Ala
>WENV170783033
MAAC01013213
412477
Alphaproteobacteria
GCA
Cys
>WENV170783034
MAAC01013214
59164
Alphaproteobacteria
GAG
Leu
>WENV170783040
MAAC01013277
187569
Alphaproteobacteria
CCG
Arg
>WENV170783041
MAAC01013286
344517
Alphaproteobacteria
GTT
Asn
>WENV170783576
MAAC01017969
87420
Alphaproteobacteria
GTA
Tyr
>WENV170783703
MAAC01018389
338283
Alphaproteobacteria
CAC
Val
>WENV170783704
MAAC01018396
148353
Alphaproteobacteria
CAT
Met
>WENV170783717
MAAC01018413
127020
Alphaproteobacteria
TCT
Arg
>WENV170783719
MAAC01018415
147879
Alphaproteobacteria
TGG
Pro
>WENV170783726
MAAC01018433
338282
Alphaproteobacteria
GTT
Asn
>WENV170783727
MAAC01018438
319925
Alphaproteobacteria
TGT
Thr
>WENV170783728
MAAC01018441
147877
Alphaproteobacteria
GTG
His
>WENV170783729
MAAC01018442
28682
Alphaproteobacteria
GGA
Ser
>WENV170783736
MAAC01018473
340106
Alphaproteobacteria
GCC
Gly
>WENV170783737
MAAC01018473
340106
Alphaproteobacteria
GCC
Gly
>WENV170783738
MAAC01018473
340106
Alphaproteobacteria
GCC
Gly
>WENV170783739
MAAC01018473
113700
Alphaproteobacteria
>WENV170783744
MAAC01018491
23671
Alphaproteobacteria
CGA
Ser
>WENV170783745
MAAC01018493
236256
Alphaproteobacteria
TAC
Val
>WENV170783864
MAAC01019248
338282
Alphaproteobacteria
GTT
Asn
>WENV170783869
MAAC01019314
341164
Alphaproteobacteria
GCC
Gly
>WENV170783870
MAAC01019314
341164
Alphaproteobacteria
GCC
Gly
>WENV170783879
MAAC01019349
113715
Alphaproteobacteria
TAG
Leu
>WENV170783883
MAAC01019361
236256
Alphaproteobacteria
TAC
Val
>WENV170783884
MAAC01019361
113700
Alphaproteobacteria
>WENV170783894
MAAC01019413
150172
Alphaproteobacteria
ACG
Arg
>WENV170783898
MAAC01019428
306070
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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