This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170799525
MDSV01215035
165250
Alphaproteobacteria
TGG
Pro
>WENV170790559
MDSV01068242
238010
Alphaproteobacteria
TTT
Lys
>WENV170799281
MDSV01210819
365250
Alphaproteobacteria
GCC
Gly
>WENV170799395
MDSV01212922
237493
Alphaproteobacteria
CCA
Trp
>WENV170800390
MDSV01229044
149985
Alphaproteobacteria
ACG
Arg
>WENV170793566
MDSV01118460
34696
Alphaproteobacteria
GGA
Ser
>WENV170791315
MDSV01080798
306070
Alphaproteobacteria
CCA
Trp
>WENV170787075
MDSV01012763
306070
Alphaproteobacteria
CCA
Trp
>WENV170801046
MDSV01240179
306070
Alphaproteobacteria
CCA
Trp
>WENV170797245
MDSV01177448
306070
Alphaproteobacteria
CCA
Trp
>WENV170795040
MDSV01141719
306070
Alphaproteobacteria
CCA
Trp
>WENV170793869
MDSV01123481
306070
Alphaproteobacteria
CCA
Trp
>WENV170795204
MDSV01144439
28073
Alphaproteobacteria
GCT
Ser
>WENV170791824
MDSV01089430
10665
Alphaproteobacteria
GCT
Ser
>WENV170788220
MDSV01030026
193550
Alphaproteobacteria
TCT
Arg
>WENV170787985
MDSV01025962
113700
Alphaproteobacteria
>WENV170790360
MDSV01064717
144964
Alphaproteobacteria
TGG
Pro
>WENV170793868
MDSV01123477
144964
Alphaproteobacteria
TGG
Pro
>WENV170793418
MDSV01115820
184120
Alphaproteobacteria
GTG
His
>WENV170793233
MDSV01112744
184120
Alphaproteobacteria
GTG
His
>WENV170789259
MDSV01047370
184120
Alphaproteobacteria
GTG
His
>WENV170788561
MDSV01035757
184120
Alphaproteobacteria
GTG
His
>WENV170787943
MDSV01025455
23671
Alphaproteobacteria
CGA
Ser
>WENV170798412
MDSV01196377
23671
Alphaproteobacteria
CGA
Ser
>WENV170787135
MDSV01013743
190043
Alphaproteobacteria
CAT
Met
>WENV170787424
MDSV01018521
338282
Alphaproteobacteria
GTT
Asn
>WENV170786254
MDSV01000136
338282
Alphaproteobacteria
GTT
Asn
>WENV170798948
MDSV01205157
338282
Alphaproteobacteria
GTT
Asn
>WENV170794581
MDSV01134348
338282
Alphaproteobacteria
GTT
Asn
>WENV170786358
MDSV01002089
147083
Alphaproteobacteria
GGG
Pro
>WENV170793473
MDSV01116826
368349
Alphaproteobacteria
GTT
Asn
>WENV170801015
MDSV01239724
147577
Alphaproteobacteria
CCG
Arg
>WENV170793326
MDSV01114272
200119
Alphaproteobacteria
CAT
Met
>WENV170789234
MDSV01046957
200119
Alphaproteobacteria
CAT
Met
>WENV170794402
MDSV01131655
200119
Alphaproteobacteria
CAT
Met
>WENV170795740
MDSV01153286
237740
Alphaproteobacteria
TTT
Lys
>WENV170787168
MDSV01014392
339490
Alphaproteobacteria
GAC
Val
>WENV170786305
MDSV01001072
235492
Alphaproteobacteria
GAA
Phe
>WENV170787490
MDSV01019323
294226
Alphaproteobacteria
>WENV170786343
MDSV01001746
194755
Alphaproteobacteria
CAT
Met
>WENV170787167
MDSV01014392
96640
Alphaproteobacteria
CAA
Leu
>WENV170791849
MDSV01089842
339750
Alphaproteobacteria
GGT
Thr
>WENV170794579
MDSV01134318
192195
Alphaproteobacteria
GTC
Asp
>WENV170794097
MDSV01126724
319095
Alphaproteobacteria
TAC
Val
>WENV170790302
MDSV01064107
341307
Alphaproteobacteria
GTT
Asn
>WENV170788917
MDSV01041504
252148
Alphaproteobacteria
TGT
Thr
>WENV170794544
MDSV01133842
252148
Alphaproteobacteria
TGT
Thr
>WENV170800816
MDSV01236593
167926
Alphaproteobacteria
CAT
Met
>WENV170789306
MDSV01048222
75256
Alphaproteobacteria
CAG
Leu
>WENV170790303
MDSV01064107
426273
Alphaproteobacteria
GCA
Cys
>WENV170788825
MDSV01040120
23648
Alphaproteobacteria
CGA
Ser
>WENV170797309
MDSV01178265
280207
Alphaproteobacteria
TGC
Ala
>WENV170800044
MDSV01223486
348781
Alphaproteobacteria
GAA
Phe
>WENV170796117
MDSV01159375
241518
Alphaproteobacteria
CCA
Trp
>WENV170787873
MDSV01024985
187569
Alphaproteobacteria
CCG
Arg
>WENV170790637
MDSV01069451
319925
Alphaproteobacteria
TGT
Thr
>WENV170788653
MDSV01037329
319925
Alphaproteobacteria
TGT
Thr
>WENV170800895
MDSV01238011
319925
Alphaproteobacteria
TGT
Thr
>WENV170786956
MDSV01011010
266073
Alphaproteobacteria
TTT
Lys
>WENV170798217
MDSV01193201
266073
Alphaproteobacteria
TTT
Lys
>WENV170797422
MDSV01180114
266073
Alphaproteobacteria
TTT
Lys
>WENV170797376
MDSV01179515
266073
Alphaproteobacteria
TTT
Lys
>WENV170794497
MDSV01133023
144973
Alphaproteobacteria
CCT
Arg
>WENV170790649
MDSV01069658
369678
Alphaproteobacteria
GGT
Thr
>WENV170787478
MDSV01019258
369678
Alphaproteobacteria
GGT
Thr
>WENV170794476
MDSV01132781
369678
Alphaproteobacteria
GGT
Thr
>WENV170799782
MDSV01219335
150194
Alphaproteobacteria
TCT
Arg
>WENV170800562
MDSV01232348
235430
Alphaproteobacteria
TTT
Lys
>WENV170794701
MDSV01136292
235430
Alphaproteobacteria
TTT
Lys
>WENV170788248
MDSV01030462
412424
Alphaproteobacteria
TCC
Gly
>WENV170789895
MDSV01057196
150356
Alphaproteobacteria
GTC
Asp
>WENV170789685
MDSV01053839
21074
Alphaproteobacteria
GGA
Ser
>WENV170795489
MDSV01149515
23587
Alphaproteobacteria
GGA
Ser
>WENV170789750
MDSV01054778
388882
Alphaproteobacteria
GCC
Gly
>WENV170793406
MDSV01115668
341873
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK