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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
120 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180408316
OBUS01000495
24650
Bacillota
TAA
Leu
>WENV180408133
OBUS01000193
243647
Bacillota
TTT
Lys
>WENV180408198
OBUS01000247
243647
Bacillota
TTT
Lys
>WENV180408340
OBUS01000593
243647
Bacillota
TTT
Lys
>WENV180408480
OBUS01002505
16469
Bacillota
GCT
Ser
>WENV180408023
OBUS01000075
16842
Bacillota
CGA
Ser
>WENV180408461
OBUS01002378
283807
Bacillota
TAC
Val
>WENV180408496
OBUS01003039
415708
Bacillota
CCA
Trp
>WENV180408537
OBUS01005024
267649
Bacillota
TAC
Val
>WENV180408285
OBUS01000395
267649
Bacillota
TAC
Val
>WENV180408221
OBUS01000275
339825
Bacillota
CCG
Arg
>WENV180408226
OBUS01000295
338152
Bacillota
TTC
Glu
>WENV180408462
OBUS01002378
23769
Bacillota
TAA
Leu
>WENV180408403
OBUS01001360
37071
Bacillota
TGA
Ser
>WENV180408055
OBUS01000100
37071
Bacillota
TGA
Ser
>WENV180407964
OBUS01000033
277175
Bacillota
CTT
Lys
>WENV180408210
OBUS01000269
147639
Bacillota
ACG
Arg
>WENV180408137
OBUS01000195
59312
Bacillota
CAG
Leu
>WENV180408578
OBUS01006602
239020
Bacillota
TTT
Lys
>WENV180408477
OBUS01002505
239201
Bacillota
GAA
Phe
>WENV180408163
OBUS01000222
338147
Bacillota
CTC
Glu
>WENV180408045
OBUS01000090
338147
Bacillota
CTC
Glu
>WENV180407968
OBUS01000037
338147
Bacillota
CTC
Glu
>WENV180408293
OBUS01000434
338147
Bacillota
CTC
Glu
>WENV180407938
OBUS01000015
340802
Bacillota
TTG
Gln
>WENV180408457
OBUS01002298
412345
Bacillota
CTG
Gln
>WENV180408185
OBUS01000239
147758
Bacillota
CGG
Pro
>WENV180408541
OBUS01005165
237265
Bacillota
TAC
Val
>WENV180408467
OBUS01002505
237265
Bacillota
TAC
Val
>WENV180408178
OBUS01000239
237265
Bacillota
TAC
Val
>WENV180408417
OBUS01001580
235114
Bacillota
TTT
Lys
>WENV180408144
OBUS01000198
235114
Bacillota
TTT
Lys
>WENV180408094
OBUS01000145
235114
Bacillota
TTT
Lys
>WENV180408321
OBUS01000520
10926
Bacillota
CGA
Ser
>WENV180408300
OBUS01000454
147760
Bacillota
TCT
Arg
>WENV180408314
OBUS01000495
144668
Bacillota
GTC
Asp
>WENV180408189
OBUS01000243
44859
Bacillota
AAG
Leu
>WENV180408136
OBUS01000195
44859
Bacillota
AAG
Leu
>WENV180408125
OBUS01000188
16834
Bacillota
GCT
Ser
>WENV180408481
OBUS01002505
339151
Bacillota
TTC
Glu
>WENV180408307
OBUS01000488
339151
Bacillota
TTC
Glu
>WENV180407996
OBUS01000052
114002
Bacillota
CAA
Leu
>WENV180408540
OBUS01005165
8090
Bacillota
GGA
Ser
>WENV180407886
OBUS01000001
37437
Bacillota
TAA
Leu
>WENV180408138
OBUS01000196
339935
Bacillota
GTT
Asn
>WENV180408392
OBUS01001218
16266
Bacillota
GCT
Ser
>WENV180408584
OBUS01007023
173314
Bacillota
GAT
Ile
>WENV180408218
OBUS01000269
173314
Bacillota
GAT
Ile
>WENV180408337
OBUS01000573
279677
Bacillota
GGC
Ala
>WENV180408303
OBUS01000472
243612
Bacillota
TAC
Val
>WENV180408499
OBUS01003039
59329
Bacillota
CAA
Leu
>WENV180408238
OBUS01000306
37269
Bacillota
TGA
Ser
>WENV180408225
OBUS01000295
287000
Bacillota
GTT
Asn
>WENV180408082
OBUS01000142
169968
Bacillota
CAT
Met
>WENV180408156
OBUS01000213
162445
Bacillota
CAT
Met
>WENV180408154
OBUS01000213
162445
Bacillota
CAT
Met
>WENV180408177
OBUS01000233
152492
Bacillota
GGG
Pro
>WENV180408359
OBUS01000745
147135
Bacillota
ACG
Arg
>WENV180408565
OBUS01005622
144599
Bacillota
GTC
Asp
>WENV180407944
OBUS01000016
340081
Bacillota
CCG
Arg
>WENV180408272
OBUS01000363
100326
Bacillota
GTA
Tyr
>WENV180408142
OBUS01000198
144610
Bacillota
GTG
His
>WENV180407937
OBUS01000015
144610
Bacillota
GTG
His
>WENV180408224
OBUS01000289
59705
Bacillota
CAG
Leu
>WENV180407948
OBUS01000018
342895
Bacillota
CAT
Met
>WENV180408610
OBUS01012714
412387
Bacillota
GCA
Cys
>WENV180408498
OBUS01003039
412406
Bacillota
GCA
Cys
>WENV180408034
OBUS01000079
238745
Bacillota
CTT
Lys
>WENV180408583
OBUS01006732
18852
Bacillota
GCT
Ser
>WENV180408298
OBUS01000447
18852
Bacillota
GCT
Ser
>WENV180408468
OBUS01002505
238497
Bacillota
TTT
Lys
>WENV180408179
OBUS01000239
238497
Bacillota
TTT
Lys
>WENV180408028
OBUS01000075
194150
Bacillota
TGG
Pro
>WENV180408026
OBUS01000075
250349
Bacillota
GAA
Phe
>WENV180407883
OBUS01000001
250349
Bacillota
GAA
Phe
>WENV180408049
OBUS01000096
235142
Bacillota
CTT
Lys
>WENV180408047
OBUS01000092
235142
Bacillota
CTT
Lys
>WENV180408473
OBUS01002505
146741
Bacillota
CAT
Met
>WENV180408223
OBUS01000279
256380
Bacillota
>WENV180408001
OBUS01000061
340080
Bacillota
CCT
Arg
>WENV180408427
OBUS01001703
235127
Bacillota
TTT
Lys
>WENV180408025
OBUS01000075
235197
Bacillota
GTC
Asp
>WENV180407882
OBUS01000001
235197
Bacillota
GTC
Asp
>WENV180408196
OBUS01000247
368876
Bacillota
GCC
Gly
>WENV180407884
OBUS01000001
368876
Bacillota
GCC
Gly
>WENV180408424
OBUS01001703
147674
Bacillota
TCT
Arg
>WENV180408566
OBUS01005622
254433
Bacillota
TAC
Val
>WENV180408308
OBUS01000488
258820
Bacillota
CGT
Thr
>WENV180408131
OBUS01000193
243613
Bacillota
GTG
His
>WENV180408574
OBUS01006535
144652
Bacillota
GTC
Asp
>WENV180408323
OBUS01000522
238746
Bacillota
CGT
Thr
>WENV180408336
OBUS01000573
238493
Bacillota
CGC
Ala
>WENV180408319
OBUS01000511
412403
Bacillota
CCC
Gly
>WENV180408274
OBUS01000363
238974
Bacillota
GAA
Phe
>WENV180408093
OBUS01000145
235113
Bacillota
GAA
Phe
>WENV180408056
OBUS01000100
235113
Bacillota
GAA
Phe
>WENV180408555
OBUS01005354
238747
Bacillota
GTG
His
>WENV180408345
OBUS01000593
152491
Bacillota
CAT
Met
>WENV180408431
OBUS01001727
347434
Bacillota
CTC
Glu
>WENV180408341
OBUS01000593
273029
Bacillota
TGT
Thr
>WENV180408344
OBUS01000593
281472
Bacillota
GGT
Thr
>WENV180408030
OBUS01000075
178024
Bacillota
TCT
Arg
>WENV180407936
OBUS01000015
157635
Bacillota
TCT
Arg
>WENV180408471
OBUS01002505
145468
Bacillota
ACG
Arg
>WENV180408183
OBUS01000239
145468
Bacillota
ACG
Arg
>WENV180408091
OBUS01000145
95563
Bacillota
GTA
Tyr
>WENV180408053
OBUS01000099
95563
Bacillota
GTA
Tyr
>WENV180407881
OBUS01000001
413657
Bacillota
CCC
Gly
>WENV180408418
OBUS01001580
114075
Bacillota
TAG
Leu
>WENV180408482
OBUS01002505
3285
Bacillota
TGA
Ser
>WENV180408277
OBUS01000364
238945
Bacillota
GCC
Gly
>WENV180408276
OBUS01000364
238945
Bacillota
GCC
Gly
>WENV180408077
OBUS01000122
238945
Bacillota
GCC
Gly
>WENV180408075
OBUS01000122
238945
Bacillota
GCC
Gly
>WENV180408071
OBUS01000122
238945
Bacillota
GCC
Gly
>WENV180408339
OBUS01000593
287034
Bacillota
GTT
Asn
>WENV180408197
OBUS01000247
287034
Bacillota
GTT
Asn
>WENV180408132
OBUS01000193
343027
Bacillota
TTG
Gln
>WENV180408500
OBUS01003081
37258
Bacillota
AAG
Leu
>WENV180408309
OBUS01000488
113740
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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