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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180474036
OBYS01000045
196621
Bacillota
GTC
Asp
>WENV180474337
OBYS01000541
196621
Bacillota
GTC
Asp
>WENV180474439
OBYS01000959
196621
Bacillota
GTC
Asp
>WENV180474624
OBYS01005421
361659
Bacillota
GCC
Gly
>WENV180474246
OBYS01000305
144612
Bacillota
TCT
Arg
>WENV180474746
OBYS01026398
154063
Bacillota
CGG
Pro
>WENV180474164
OBYS01000154
267649
Bacillota
TAC
Val
>WENV180474299
OBYS01000432
235134
Bacillota
GAA
Phe
>WENV180474360
OBYS01000612
235098
Bacillota
GAC
Val
>WENV180474334
OBYS01000538
235098
Bacillota
GAC
Val
>WENV180474453
OBYS01001008
338152
Bacillota
TTC
Glu
>WENV180474185
OBYS01000186
338152
Bacillota
TTC
Glu
>WENV180474203
OBYS01000223
148239
Bacillota
TCT
Arg
>WENV180473949
OBYS01000004
148239
Bacillota
TCT
Arg
>WENV180474414
OBYS01000816
44854
Bacillota
TGA
Ser
>WENV180474437
OBYS01000959
304022
Bacillota
GCC
Gly
>WENV180474345
OBYS01000552
304022
Bacillota
GCC
Gly
>WENV180474037
OBYS01000045
304022
Bacillota
GCC
Gly
>WENV180474035
OBYS01000045
304022
Bacillota
GCC
Gly
>WENV180474713
OBYS01019189
302150
Bacillota
TAC
Val
>WENV180474789
OBYS01051695
307003
Bacillota
TGC
Ala
>WENV180473945
OBYS01000004
59312
Bacillota
CAG
Leu
>WENV180474793
OBYS01051829
97943
Bacillota
GTA
Tyr
>WENV180473972
OBYS01000011
338147
Bacillota
CTC
Glu
>WENV180473971
OBYS01000011
338147
Bacillota
CTC
Glu
>WENV180473970
OBYS01000011
338147
Bacillota
CTC
Glu
>WENV180474591
OBYS01003661
235150
Bacillota
TGC
Ala
>WENV180474673
OBYS01011372
152047
Bacillota
GGG
Pro
>WENV180474623
OBYS01005421
114359
Bacillota
TAG
Leu
>WENV180474735
OBYS01022229
235137
Bacillota
TGC
Ala
>WENV180474647
OBYS01008301
235137
Bacillota
TGC
Ala
>WENV180474144
OBYS01000143
340802
Bacillota
TTG
Gln
>WENV180474051
OBYS01000053
293599
Bacillota
CTT
Lys
>WENV180474502
OBYS01001383
241761
Bacillota
TAC
Val
>WENV180474491
OBYS01001217
429429
Bacillota
CCA
Trp
>WENV180474358
OBYS01000610
429429
Bacillota
CCA
Trp
>WENV180474313
OBYS01000460
429429
Bacillota
CCA
Trp
>WENV180474179
OBYS01000182
429429
Bacillota
CCA
Trp
>WENV180474094
OBYS01000087
429429
Bacillota
CCA
Trp
>WENV180474458
OBYS01001008
41154
Bacillota
TAA
Leu
>WENV180474722
OBYS01019799
186380
Bacillota
GTC
Asp
>WENV180474543
OBYS01002054
11034
Bacillota
GGA
Ser
>WENV180474438
OBYS01000959
235117
Bacillota
TAC
Val
>WENV180474582
OBYS01003421
338550
Bacillota
>WENV180474657
OBYS01009225
342736
Bacillota
TTG
Gln
>WENV180474440
OBYS01000959
235079
Bacillota
GAA
Phe
>WENV180474034
OBYS01000045
235079
Bacillota
GAA
Phe
>WENV180474490
OBYS01001215
16266
Bacillota
GCT
Ser
>WENV180474468
OBYS01001061
338149
Bacillota
CTC
Glu
>WENV180474328
OBYS01000519
245298
Bacillota
CGG
Pro
>WENV180474393
OBYS01000746
37269
Bacillota
TGA
Ser
>WENV180474200
OBYS01000216
155089
Bacillota
CAT
Met
>WENV180474452
OBYS01001008
287000
Bacillota
GTT
Asn
>WENV180474184
OBYS01000186
287000
Bacillota
GTT
Asn
>WENV180474047
OBYS01000052
169968
Bacillota
CAT
Met
>WENV180474351
OBYS01000563
162445
Bacillota
CAT
Met
>WENV180474349
OBYS01000563
162445
Bacillota
CAT
Met
>WENV180474364
OBYS01000623
152492
Bacillota
GGG
Pro
>WENV180474712
OBYS01019189
144599
Bacillota
GTC
Asp
>WENV180474698
OBYS01016215
144599
Bacillota
GTC
Asp
>WENV180474701
OBYS01016215
100326
Bacillota
GTA
Tyr
>WENV180474335
OBYS01000540
100326
Bacillota
GTA
Tyr
>WENV180474229
OBYS01000275
100326
Bacillota
GTA
Tyr
>WENV180474131
OBYS01000130
100326
Bacillota
GTA
Tyr
>WENV180474079
OBYS01000072
100326
Bacillota
GTA
Tyr
>WENV180474204
OBYS01000223
144610
Bacillota
GTG
His
>WENV180474143
OBYS01000143
144610
Bacillota
GTG
His
>WENV180473950
OBYS01000004
144610
Bacillota
GTG
His
>WENV180474300
OBYS01000432
240017
Bacillota
GCC
Gly
>WENV180473975
OBYS01000012
240017
Bacillota
GCC
Gly
>WENV180474327
OBYS01000519
411547
Bacillota
CTG
Gln
>WENV180474325
OBYS01000516
411547
Bacillota
CTG
Gln
>WENV180474311
OBYS01000459
147684
Bacillota
ACG
Arg
>WENV180474415
OBYS01000816
4624
Bacillota
GCT
Ser
>WENV180474721
OBYS01019799
263765
Bacillota
TAC
Val
>WENV180474297
OBYS01000432
263765
Bacillota
TAC
Val
>WENV180473974
OBYS01000012
263765
Bacillota
TAC
Val
>WENV180474702
OBYS01016407
18852
Bacillota
GCT
Ser
>WENV180474339
OBYS01000541
235095
Bacillota
GGT
Thr
>WENV180474338
OBYS01000541
235095
Bacillota
GGT
Thr
>WENV180474326
OBYS01000519
411549
Bacillota
TTG
Gln
>WENV180474666
OBYS01010244
148188
Bacillota
CCG
Arg
>WENV180474648
OBYS01008313
152046
Bacillota
TCT
Arg
>WENV180474039
OBYS01000045
80612
Bacillota
GTA
Tyr
>WENV180474033
OBYS01000045
80612
Bacillota
GTA
Tyr
>WENV180474291
OBYS01000396
256380
Bacillota
>WENV180474134
OBYS01000134
256380
Bacillota
>WENV180474625
OBYS01005421
411739
Bacillota
TCC
Gly
>WENV180474617
OBYS01005421
411739
Bacillota
TCC
Gly
>WENV180474374
OBYS01000651
235124
Bacillota
TGG
Pro
>WENV180474622
OBYS01005421
237963
Bacillota
TTT
Lys
>WENV180474626
OBYS01005421
201667
Bacillota
TCT
Arg
>WENV180474618
OBYS01005421
201667
Bacillota
TCT
Arg
>WENV180474511
OBYS01001543
338129
Bacillota
TGT
Thr
>WENV180474620
OBYS01005421
279635
Bacillota
GTG
His
>WENV180474252
OBYS01000311
144583
Bacillota
ACG
Arg
>WENV180474681
OBYS01012309
144652
Bacillota
GTC
Asp
>WENV180474076
OBYS01000072
144652
Bacillota
GTC
Asp
>WENV180474271
OBYS01000341
247734
Bacillota
TGC
Ala
>WENV180474403
OBYS01000795
235171
Bacillota
CCA
Trp
>WENV180474227
OBYS01000275
238974
Bacillota
GAA
Phe
>WENV180474469
OBYS01001061
144621
Bacillota
GTT
Asn
>WENV180474277
OBYS01000348
144621
Bacillota
GTT
Asn
>WENV180474720
OBYS01019799
353527
Bacillota
TTC
Glu
>WENV180474436
OBYS01000954
58712
Bacillota
CAG
Leu
>WENV180474283
OBYS01000378
58712
Bacillota
CAG
Leu
>WENV180474240
OBYS01000295
245296
Bacillota
CCC
Gly
>WENV180474753
OBYS01027765
272992
Bacillota
CTT
Lys
>WENV180474736
OBYS01022915
196632
Bacillota
GTC
Asp
>WENV180474142
OBYS01000143
157635
Bacillota
TCT
Arg
>WENV180474209
OBYS01000227
144594
Bacillota
CAC
Val
>WENV180474105
OBYS01000099
414486
Bacillota
CCC
Gly
>WENV180474288
OBYS01000384
114075
Bacillota
TAG
Leu
>WENV180474207
OBYS01000223
114075
Bacillota
TAG
Leu
>WENV180474396
OBYS01000754
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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