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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180504295
OCAN01001345
235146
Actinomycetota
CGT
Thr
>WENV180504619
OCAN01015127
235615
Actinomycetota
TGC
Ala
>WENV180503976
OCAN01000238
119475
Actinomycetota
TAA
Leu
>WENV180504307
OCAN01001447
235347
Actinomycetota
GGC
Ala
>WENV180504308
OCAN01001447
235347
Actinomycetota
GGC
Ala
>WENV180504574
OCAN01008496
235854
Actinomycetota
CTT
Lys
>WENV180504032
OCAN01000347
166493
Actinomycetota
CTT
Lys
>WENV180504216
OCAN01000861
166750
Actinomycetota
CAT
Met
>WENV180503861
OCAN01000095
144589
Actinomycetota
ACG
Arg
>WENV180503860
OCAN01000095
144589
Actinomycetota
ACG
Arg
>WENV180503790
OCAN01000057
37070
Actinomycetota
CGA
Ser
>WENV180504302
OCAN01001426
144600
Actinomycetota
TGG
Pro
>WENV180503786
OCAN01000056
235092
Actinomycetota
CCG
Arg
>WENV180504399
OCAN01002263
158720
Actinomycetota
ACG
Arg
>WENV180504398
OCAN01002263
158720
Actinomycetota
ACG
Arg
>WENV180504391
OCAN01002212
411601
Actinomycetota
CCC
Gly
>WENV180504684
OCAN01032404
80668
Actinomycetota
GTA
Tyr
>WENV180504587
OCAN01009980
235856
Actinomycetota
TTT
Lys
>WENV180503990
OCAN01000253
144826
Actinomycetota
GGG
Pro
>WENV180504090
OCAN01000458
23370
Actinomycetota
GCT
Ser
>WENV180504260
OCAN01001060
174149
Actinomycetota
GAT
Ile
>WENV180504700
OCAN01035797
338389
Actinomycetota
CAC
Val
>WENV180503999
OCAN01000276
162208
Actinomycetota
TAC
Val
>WENV180503791
OCAN01000057
16219
Actinomycetota
GCT
Ser
>WENV180504261
OCAN01001060
235174
Actinomycetota
TGC
Ala
>WENV180503887
OCAN01000124
235174
Actinomycetota
TGC
Ala
>WENV180504675
OCAN01028022
145052
Actinomycetota
GAT
Ile
>WENV180504620
OCAN01015127
145052
Actinomycetota
GAT
Ile
>WENV180503873
OCAN01000105
235101
Actinomycetota
TTT
Lys
>WENV180504164
OCAN01000659
121510
Actinomycetota
TAA
Leu
>WENV180504054
OCAN01000391
144625
Actinomycetota
GTC
Asp
>WENV180503788
OCAN01000057
144625
Actinomycetota
GTC
Asp
>WENV180504146
OCAN01000595
44855
Actinomycetota
TGA
Ser
>WENV180504654
OCAN01023745
146611
Actinomycetota
CGG
Pro
>WENV180503988
OCAN01000253
235199
Actinomycetota
CAC
Val
>WENV180504265
OCAN01001079
235199
Actinomycetota
CAC
Val
>WENV180504247
OCAN01000992
44862
Actinomycetota
CGA
Ser
>WENV180504573
OCAN01008459
95688
Actinomycetota
TAG
Leu
>WENV180504306
OCAN01001447
413665
Actinomycetota
TTG
Gln
>WENV180504217
OCAN01000861
254857
Actinomycetota
CCG
Arg
>WENV180504527
OCAN01005400
235858
Actinomycetota
CGT
Thr
>WENV180503842
OCAN01000080
16223
Actinomycetota
GAG
Leu
>WENV180504069
OCAN01000419
144593
Actinomycetota
TAT
Ile
>WENV180504148
OCAN01000596
144700
Actinomycetota
CAT
Met
>WENV180503792
OCAN01000057
98279
Actinomycetota
GTA
Tyr
>WENV180504016
OCAN01000304
338148
Actinomycetota
CTG
Gln
>WENV180503864
OCAN01000099
338148
Actinomycetota
CTG
Gln
>WENV180504126
OCAN01000518
235148
Actinomycetota
GTT
Asn
>WENV180504125
OCAN01000518
235148
Actinomycetota
GTT
Asn
>WENV180503949
OCAN01000190
235148
Actinomycetota
GTT
Asn
>WENV180503948
OCAN01000190
235148
Actinomycetota
GTT
Asn
>WENV180503941
OCAN01000181
235148
Actinomycetota
GTT
Asn
>WENV180504576
OCAN01008819
240687
Actinomycetota
>WENV180504578
OCAN01008819
240687
Actinomycetota
>WENV180504374
OCAN01001901
176456
Actinomycetota
TCT
Arg
>WENV180503920
OCAN01000161
144825
Actinomycetota
CAT
Met
>WENV180504717
OCAN01048177
145348
Actinomycetota
CAA
Leu
>WENV180504660
OCAN01025478
235655
Actinomycetota
GTT
Asn
>WENV180503921
OCAN01000161
235348
Actinomycetota
CCT
Arg
>WENV180503890
OCAN01000124
411554
Actinomycetota
CCC
Gly
>WENV180504294
OCAN01001345
113601
Actinomycetota
TAG
Leu
>WENV180503866
OCAN01000099
113601
Actinomycetota
TAG
Leu
>WENV180504246
OCAN01000988
144595
Actinomycetota
CAA
Leu
>WENV180503843
OCAN01000080
144595
Actinomycetota
CAA
Leu
>WENV180503951
OCAN01000190
145343
Actinomycetota
GGG
Pro
>WENV180504652
OCAN01023390
152215
Actinomycetota
CAT
Met
>WENV180503900
OCAN01000149
235149
Actinomycetota
CCT
Arg
>WENV180504687
OCAN01032529
235852
Actinomycetota
CCT
Arg
>WENV180504293
OCAN01001345
235121
Actinomycetota
CGT
Thr
>WENV180503865
OCAN01000099
235121
Actinomycetota
CGT
Thr
>WENV180504014
OCAN01000304
47164
Actinomycetota
GGA
Ser
>WENV180503844
OCAN01000080
144635
Actinomycetota
TGG
Pro
>WENV180504625
OCAN01015872
239199
Actinomycetota
TGT
Thr
>WENV180503885
OCAN01000124
80622
Actinomycetota
CAG
Leu
>WENV180503794
OCAN01000057
44851
Actinomycetota
TGA
Ser
>WENV180504610
OCAN01013386
412834
Actinomycetota
GCA
Cys
>WENV180503940
OCAN01000181
235173
Actinomycetota
GGC
Ala
>WENV180503888
OCAN01000124
235173
Actinomycetota
GGC
Ala
>WENV180504677
OCAN01029729
243162
Actinomycetota
GTT
Asn
>WENV180504699
OCAN01035768
235859
Actinomycetota
GGT
Thr
>WENV180504129
OCAN01000532
144660
Actinomycetota
TAC
Val
>WENV180504577
OCAN01008819
338388
Actinomycetota
CTG
Gln
>WENV180504147
OCAN01000596
95593
Actinomycetota
>WENV180504276
OCAN01001127
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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