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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180613332
OCPX01051637
24650
Bacillota
TAA
Leu
>WENV180613230
OCPX01032862
37213
Bacillota
TGA
Ser
>WENV180612774
OCPX01004543
144612
Bacillota
TCT
Arg
>WENV180613170
OCPX01022595
144612
Bacillota
TCT
Arg
>WENV180611804
OCPX01000089
267556
Bacillota
TAC
Val
>WENV180611806
OCPX01000089
267556
Bacillota
TAC
Val
>WENV180613333
OCPX01052021
267556
Bacillota
TAC
Val
>WENV180612977
OCPX01009387
339890
Bacillota
TTG
Gln
>WENV180612495
OCPX01001741
235098
Bacillota
GAC
Val
>WENV180612857
OCPX01005866
235098
Bacillota
GAC
Val
>WENV180613088
OCPX01015627
235098
Bacillota
GAC
Val
>WENV180613192
OCPX01025868
235098
Bacillota
GAC
Val
>WENV180612339
OCPX01001070
338152
Bacillota
TTC
Glu
>WENV180612939
OCPX01008230
44854
Bacillota
TGA
Ser
>WENV180612392
OCPX01001273
44854
Bacillota
TGA
Ser
>WENV180613414
OCPX01088258
144577
Bacillota
GAT
Ile
>WENV180613382
OCPX01071587
246023
Bacillota
TGC
Ala
>WENV180613202
OCPX01028602
59312
Bacillota
CAG
Leu
>WENV180613514
OCPX01165121
238910
Bacillota
CTT
Lys
>WENV180611873
OCPX01000139
155273
Bacillota
CAT
Met
>WENV180613428
OCPX01098473
235137
Bacillota
TGC
Ala
>WENV180613214
OCPX01030654
235137
Bacillota
TGC
Ala
>WENV180612360
OCPX01001126
340802
Bacillota
TTG
Gln
>WENV180611703
OCPX01000026
340802
Bacillota
TTG
Gln
>WENV180612320
OCPX01000988
361897
Bacillota
CTC
Glu
>WENV180613191
OCPX01025728
37083
Bacillota
TGA
Ser
>WENV180613516
OCPX01165169
144668
Bacillota
GTC
Asp
>WENV180613452
OCPX01114676
182792
Bacillota
GTC
Asp
>WENV180612674
OCPX01003262
182792
Bacillota
GTC
Asp
>WENV180612695
OCPX01003387
116350
Bacillota
TAG
Leu
>WENV180613092
OCPX01015834
41154
Bacillota
TAA
Leu
>WENV180612963
OCPX01008626
41154
Bacillota
TAA
Leu
>WENV180613356
OCPX01060533
44859
Bacillota
AAG
Leu
>WENV180612794
OCPX01004787
11034
Bacillota
GGA
Ser
>WENV180613451
OCPX01114676
235117
Bacillota
TAC
Val
>WENV180612867
OCPX01005969
274189
Bacillota
TGT
Thr
>WENV180612632
OCPX01002755
274189
Bacillota
TGT
Thr
>WENV180613506
OCPX01161429
235079
Bacillota
GAA
Phe
>WENV180612784
OCPX01004690
235079
Bacillota
GAA
Phe
>WENV180612078
OCPX01000446
235079
Bacillota
GAA
Phe
>WENV180613413
OCPX01088258
235087
Bacillota
TGC
Ala
>WENV180613137
OCPX01019879
149041
Bacillota
GTC
Asp
>WENV180612785
OCPX01004702
149041
Bacillota
GTC
Asp
>WENV180612781
OCPX01004637
338149
Bacillota
CTC
Glu
>WENV180613060
OCPX01013363
245298
Bacillota
CGG
Pro
>WENV180612915
OCPX01007275
245298
Bacillota
CGG
Pro
>WENV180612934
OCPX01007961
37269
Bacillota
TGA
Ser
>WENV180612473
OCPX01001649
37269
Bacillota
TGA
Ser
>WENV180612234
OCPX01000758
37269
Bacillota
TGA
Ser
>WENV180613205
OCPX01028631
287000
Bacillota
GTT
Asn
>WENV180612265
OCPX01000843
287000
Bacillota
GTT
Asn
>WENV180611867
OCPX01000132
287000
Bacillota
GTT
Asn
>WENV180611802
OCPX01000089
287000
Bacillota
GTT
Asn
>WENV180612488
OCPX01001720
169968
Bacillota
CAT
Met
>WENV180612514
OCPX01001832
173810
Bacillota
CAT
Met
>WENV180612746
OCPX01004126
162445
Bacillota
CAT
Met
>WENV180611841
OCPX01000113
162445
Bacillota
CAT
Met
>WENV180611839
OCPX01000113
162445
Bacillota
CAT
Met
>WENV180611807
OCPX01000089
162445
Bacillota
CAT
Met
>WENV180611805
OCPX01000089
162445
Bacillota
CAT
Met
>WENV180612420
OCPX01001344
152492
Bacillota
GGG
Pro
>WENV180612007
OCPX01000306
152492
Bacillota
GGG
Pro
>WENV180611868
OCPX01000132
152492
Bacillota
GGG
Pro
>WENV180612076
OCPX01000446
235078
Bacillota
TAC
Val
>WENV180613505
OCPX01161353
144610
Bacillota
GTG
His
>WENV180612359
OCPX01001126
144610
Bacillota
GTG
His
>WENV180611702
OCPX01000026
144610
Bacillota
GTG
His
>WENV180612686
OCPX01003365
411547
Bacillota
CTG
Gln
>WENV180612589
OCPX01002488
411547
Bacillota
CTG
Gln
>WENV180612644
OCPX01002860
147684
Bacillota
ACG
Arg
>WENV180611793
OCPX01000086
147684
Bacillota
ACG
Arg
>WENV180613300
OCPX01044641
4624
Bacillota
GCT
Ser
>WENV180612940
OCPX01008230
4624
Bacillota
GCT
Ser
>WENV180612393
OCPX01001273
4624
Bacillota
GCT
Ser
>WENV180613036
OCPX01011577
412387
Bacillota
GCA
Cys
>WENV180612404
OCPX01001308
412387
Bacillota
GCA
Cys
>WENV180612402
OCPX01001308
412387
Bacillota
GCA
Cys
>WENV180612675
OCPX01003262
235095
Bacillota
GGT
Thr
>WENV180612672
OCPX01003262
235095
Bacillota
GGT
Thr
>WENV180612731
OCPX01003991
344183
Bacillota
CTG
Gln
>WENV180613431
OCPX01101267
341777
Bacillota
TTC
Glu
>WENV180612787
OCPX01004702
239832
Bacillota
TGT
Thr
>WENV180612449
OCPX01001496
411549
Bacillota
TTG
Gln
>WENV180611790
OCPX01000082
59296
Bacillota
AAG
Leu
>WENV180612993
OCPX01009998
148188
Bacillota
CCG
Arg
>WENV180612652
OCPX01003025
148188
Bacillota
CCG
Arg
>WENV180612561
OCPX01002274
80612
Bacillota
GTA
Tyr
>WENV180612161
OCPX01000597
80612
Bacillota
GTA
Tyr
>WENV180613161
OCPX01022458
235127
Bacillota
TTT
Lys
>WENV180612978
OCPX01009387
235127
Bacillota
TTT
Lys
>WENV180612907
OCPX01007096
235127
Bacillota
TTT
Lys
>WENV180612760
OCPX01004292
235127
Bacillota
TTT
Lys
>WENV180612075
OCPX01000440
235127
Bacillota
TTT
Lys
>WENV180612975
OCPX01009387
147674
Bacillota
TCT
Arg
>WENV180612961
OCPX01008622
163943
Bacillota
GTC
Asp
>WENV180613207
OCPX01028824
235124
Bacillota
TGG
Pro
>WENV180613184
OCPX01024562
235124
Bacillota
TGG
Pro
>WENV180613172
OCPX01022760
235124
Bacillota
TGG
Pro
>WENV180612524
OCPX01001883
235124
Bacillota
TGG
Pro
>WENV180611846
OCPX01000116
254433
Bacillota
TAC
Val
>WENV180613317
OCPX01048443
338129
Bacillota
TGT
Thr
>WENV180613370
OCPX01066443
144583
Bacillota
ACG
Arg
>WENV180612410
OCPX01001314
144583
Bacillota
ACG
Arg
>WENV180612319
OCPX01000985
144672
Bacillota
TCT
Arg
>WENV180613015
OCPX01010864
144652
Bacillota
GTC
Asp
>WENV180613071
OCPX01014034
247734
Bacillota
TGC
Ala
>WENV180613186
OCPX01025091
419877
Bacillota
TCC
Gly
>WENV180612673
OCPX01003262
235171
Bacillota
CCA
Trp
>WENV180613245
OCPX01034351
238974
Bacillota
GAA
Phe
>WENV180613054
OCPX01012961
238974
Bacillota
GAA
Phe
>WENV180612782
OCPX01004637
144621
Bacillota
GTT
Asn
>WENV180612530
OCPX01001917
144621
Bacillota
GTT
Asn
>WENV180612560
OCPX01002274
58712
Bacillota
CAG
Leu
>WENV180612394
OCPX01001281
58712
Bacillota
CAG
Leu
>WENV180612162
OCPX01000597
58712
Bacillota
CAG
Leu
>WENV180612521
OCPX01001853
245296
Bacillota
CCC
Gly
>WENV180612897
OCPX01006861
272992
Bacillota
CTT
Lys
>WENV180612358
OCPX01001126
157635
Bacillota
TCT
Arg
>WENV180611701
OCPX01000026
157635
Bacillota
TCT
Arg
>WENV180613111
OCPX01017752
144594
Bacillota
CAC
Val
>WENV180612033
OCPX01000354
338127
Bacillota
TTG
Gln
>WENV180612923
OCPX01007569
272488
Bacillota
GAA
Phe
>WENV180612482
OCPX01001671
272488
Bacillota
GAA
Phe
>WENV180612074
OCPX01000440
272488
Bacillota
GAA
Phe
>WENV180611960
OCPX01000235
272488
Bacillota
GAA
Phe
>WENV180613272
OCPX01036618
238945
Bacillota
GCC
Gly
>WENV180612242
OCPX01000783
238945
Bacillota
GCC
Gly
>WENV180612181
OCPX01000665
238945
Bacillota
GCC
Gly
>WENV180612006
OCPX01000305
238945
Bacillota
GCC
Gly
>WENV180612004
OCPX01000305
238945
Bacillota
GCC
Gly
>WENV180612003
OCPX01000305
238945
Bacillota
GCC
Gly
>WENV180613450
OCPX01114676
249259
Bacillota
GCC
Gly
>WENV180613286
OCPX01040432
249259
Bacillota
GCC
Gly
>WENV180613181
OCPX01024240
249259
Bacillota
GCC
Gly
>WENV180612616
OCPX01002621
249259
Bacillota
GCC
Gly
>WENV180613444
OCPX01107950
273862
Bacillota
TGC
Ala
>WENV180612755
OCPX01004266
338128
Bacillota
TTC
Glu
>WENV180612506
OCPX01001783
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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