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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180633742
OCRA01054272
24650
Bacillota
TAA
Leu
>WENV180634215
OCRA01278607
196621
Bacillota
GTC
Asp
>WENV180633813
OCRA01068049
202812
Bacillota
CAT
Met
>WENV180633875
OCRA01086462
202812
Bacillota
CAT
Met
>WENV180633376
OCRA01002483
158247
Bacillota
>WENV180633561
OCRA01024563
144612
Bacillota
TCT
Arg
>WENV180633973
OCRA01122454
154063
Bacillota
CGG
Pro
>WENV180633933
OCRA01102566
267649
Bacillota
TAC
Val
>WENV180633796
OCRA01065181
267649
Bacillota
TAC
Val
>WENV180633769
OCRA01057982
267649
Bacillota
TAC
Val
>WENV180633646
OCRA01039993
339890
Bacillota
TTG
Gln
>WENV180633995
OCRA01129223
235098
Bacillota
GAC
Val
>WENV180633953
OCRA01113319
338152
Bacillota
TTC
Glu
>WENV180633485
OCRA01017134
338152
Bacillota
TTC
Glu
>WENV180633354
OCRA01001253
148239
Bacillota
TCT
Arg
>WENV180633784
OCRA01062421
44854
Bacillota
TGA
Ser
>WENV180634163
OCRA01241675
356488
Bacillota
TGT
Thr
>WENV180633917
OCRA01101411
235154
Bacillota
GTT
Asn
>WENV180633541
OCRA01021967
235154
Bacillota
GTT
Asn
>WENV180633665
OCRA01043010
184015
Bacillota
GTG
His
>WENV180633496
OCRA01017337
144577
Bacillota
GAT
Ile
>WENV180634236
OCRA01281162
304022
Bacillota
GCC
Gly
>WENV180633468
OCRA01013204
304022
Bacillota
GCC
Gly
>WENV180633828
OCRA01072093
302150
Bacillota
TAC
Val
>WENV180633740
OCRA01054116
246023
Bacillota
TGC
Ala
>WENV180633411
OCRA01004258
246023
Bacillota
TGC
Ala
>WENV180633434
OCRA01006945
307003
Bacillota
TGC
Ala
>WENV180633520
OCRA01019330
59312
Bacillota
CAG
Leu
>WENV180634232
OCRA01280788
238910
Bacillota
CTT
Lys
>WENV180633661
OCRA01043006
238910
Bacillota
CTT
Lys
>WENV180633463
OCRA01011244
338147
Bacillota
CTC
Glu
>WENV180634064
OCRA01164614
235294
Bacillota
TGC
Ala
>WENV180633853
OCRA01077684
345329
Bacillota
TTC
Glu
>WENV180633862
OCRA01080842
341763
Bacillota
CTC
Glu
>WENV180633596
OCRA01031875
37083
Bacillota
TGA
Ser
>WENV180633932
OCRA01102566
144668
Bacillota
GTC
Asp
>WENV180633488
OCRA01017134
144668
Bacillota
GTC
Asp
>WENV180634218
OCRA01279222
198770
Bacillota
GTC
Asp
>WENV180633768
OCRA01057982
198770
Bacillota
GTC
Asp
>WENV180634195
OCRA01262626
429429
Bacillota
CCA
Trp
>WENV180634006
OCRA01138391
379268
Bacillota
TTC
Glu
>WENV180634031
OCRA01149163
313454
Bacillota
GAA
Phe
>WENV180633493
OCRA01017134
313454
Bacillota
GAA
Phe
>WENV180634021
OCRA01145844
41154
Bacillota
TAA
Leu
>WENV180633415
OCRA01005057
11034
Bacillota
GGA
Ser
>WENV180634243
OCRA01281803
235117
Bacillota
TAC
Val
>WENV180633355
OCRA01001253
156937
Bacillota
GTG
His
>WENV180634051
OCRA01156913
338550
Bacillota
>WENV180634244
OCRA01281878
235079
Bacillota
GAA
Phe
>WENV180634237
OCRA01281259
235079
Bacillota
GAA
Phe
>WENV180634228
OCRA01280197
235079
Bacillota
GAA
Phe
>WENV180633976
OCRA01124415
235079
Bacillota
GAA
Phe
>WENV180633905
OCRA01093405
235079
Bacillota
GAA
Phe
>WENV180633830
OCRA01072093
235079
Bacillota
GAA
Phe
>WENV180633495
OCRA01017337
235087
Bacillota
TGC
Ala
>WENV180633803
OCRA01065850
173314
Bacillota
GAT
Ile
>WENV180633409
OCRA01004153
338149
Bacillota
CTC
Glu
>WENV180633712
OCRA01049983
271471
Bacillota
GCC
Gly
>WENV180634245
OCRA01282298
144766
Bacillota
CAT
Met
>WENV180633832
OCRA01072097
245298
Bacillota
CGG
Pro
>WENV180634214
OCRA01277901
37269
Bacillota
TGA
Ser
>WENV180633658
OCRA01042322
37269
Bacillota
TGA
Ser
>WENV180633631
OCRA01037869
37269
Bacillota
TGA
Ser
>WENV180634175
OCRA01250494
258936
Bacillota
GGT
Thr
>WENV180634224
OCRA01280071
413152
Bacillota
TCC
Gly
>WENV180633735
OCRA01053943
413152
Bacillota
TCC
Gly
>WENV180633713
OCRA01049987
413152
Bacillota
TCC
Gly
>WENV180633690
OCRA01046169
413152
Bacillota
TCC
Gly
>WENV180633956
OCRA01114663
162445
Bacillota
CAT
Met
>WENV180633951
OCRA01113315
201704
Bacillota
GAT
Ile
>WENV180633516
OCRA01018373
144599
Bacillota
GTC
Asp
>WENV180633799
OCRA01065393
100326
Bacillota
GTA
Tyr
>WENV180634230
OCRA01280442
144610
Bacillota
GTG
His
>WENV180633677
OCRA01045317
144610
Bacillota
GTG
His
>WENV180634050
OCRA01156913
353537
Bacillota
GTT
Asn
>WENV180633831
OCRA01072097
411547
Bacillota
CTG
Gln
>WENV180633785
OCRA01062421
4624
Bacillota
GCT
Ser
>WENV180633755
OCRA01056078
411584
Bacillota
TCC
Gly
>WENV180633844
OCRA01074759
235095
Bacillota
GGT
Thr
>WENV180634113
OCRA01202419
37193
Bacillota
TAA
Leu
>WENV180634040
OCRA01153299
59296
Bacillota
AAG
Leu
>WENV180633599
OCRA01031875
154711
Bacillota
TGG
Pro
>WENV180633615
OCRA01034499
148188
Bacillota
CCG
Arg
>WENV180633550
OCRA01022162
148188
Bacillota
CCG
Arg
>WENV180633448
OCRA01008856
80612
Bacillota
GTA
Tyr
>WENV180633647
OCRA01039993
235127
Bacillota
TTT
Lys
>WENV180633644
OCRA01039993
147674
Bacillota
TCT
Arg
>WENV180633547
OCRA01021967
241432
Bacillota
TGT
Thr
>WENV180633543
OCRA01021967
241432
Bacillota
TGT
Thr
>WENV180633613
OCRA01034324
235124
Bacillota
TGG
Pro
>WENV180634075
OCRA01170969
163753
Bacillota
TGG
Pro
>WENV180633604
OCRA01032801
345314
Bacillota
TTG
Gln
>WENV180634173
OCRA01248531
338129
Bacillota
TGT
Thr
>WENV180633578
OCRA01027888
118077
Bacillota
>WENV180634202
OCRA01272098
157838
Bacillota
GTC
Asp
>WENV180633848
OCRA01076586
157838
Bacillota
GTC
Asp
>WENV180633797
OCRA01065389
157838
Bacillota
GTC
Asp
>WENV180634226
OCRA01280131
144583
Bacillota
ACG
Arg
>WENV180633444
OCRA01008510
144583
Bacillota
ACG
Arg
>WENV180633886
OCRA01088642
310822
Bacillota
CTT
Lys
>WENV180634022
OCRA01145846
144652
Bacillota
GTC
Asp
>WENV180633801
OCRA01065393
238974
Bacillota
GAA
Phe
>WENV180633410
OCRA01004153
144621
Bacillota
GTT
Asn
>WENV180633798
OCRA01065389
295033
Bacillota
GAA
Phe
>WENV180633912
OCRA01097788
235292
Bacillota
CCA
Trp
>WENV180633385
OCRA01003010
58712
Bacillota
CAG
Leu
>WENV180633579
OCRA01027888
144762
Bacillota
TCT
Arg
>WENV180633472
OCRA01014022
245296
Bacillota
CCC
Gly
>WENV180633629
OCRA01037716
272992
Bacillota
CTT
Lys
>WENV180633675
OCRA01045068
198135
Bacillota
GAT
Ile
>WENV180633676
OCRA01045317
157635
Bacillota
TCT
Arg
>WENV180633674
OCRA01045068
299139
Bacillota
TGC
Ala
>WENV180633609
OCRA01034060
299139
Bacillota
TGC
Ala
>WENV180633471
OCRA01013784
144594
Bacillota
CAC
Val
>WENV180634110
OCRA01200374
338127
Bacillota
TTG
Gln
>WENV180634196
OCRA01262709
338207
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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