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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180829905
ODKB01000041
238673
Bacteroidota
GAA
Phe
>WENV180829991
ODKB01000154
412480
Bacteroidota
>WENV180829919
ODKB01000049
95987
Bacteroidota
CAA
Leu
>WENV180829912
ODKB01000044
339412
Bacteroidota
GGT
Thr
>WENV180831244
ODKB01067169
148097
Bacteroidota
TGG
Pro
>WENV180829963
ODKB01000098
237796
Bacteroidota
CGT
Thr
>WENV180830157
ODKB01000597
237796
Bacteroidota
CGT
Thr
>WENV180830594
ODKB01006636
237796
Bacteroidota
CGT
Thr
>WENV180831222
ODKB01061194
237796
Bacteroidota
CGT
Thr
>WENV180830112
ODKB01000428
147942
Bacteroidota
GTC
Asp
>WENV180831494
ODKB01240334
126966
Bacteroidota
TAC
Val
>WENV180830561
ODKB01005826
126966
Bacteroidota
TAC
Val
>WENV180830145
ODKB01000563
126966
Bacteroidota
TAC
Val
>WENV180829855
ODKB01000012
126966
Bacteroidota
TAC
Val
>WENV180831375
ODKB01129468
97336
Bacteroidota
CAG
Leu
>WENV180830454
ODKB01003876
126965
Bacteroidota
GGG
Pro
>WENV180830862
ODKB01015936
340120
Bacteroidota
CCT
Arg
>WENV180830258
ODKB01001267
340120
Bacteroidota
CCT
Arg
>WENV180830048
ODKB01000217
340120
Bacteroidota
CCT
Arg
>WENV180830220
ODKB01000937
24174
Bacteroidota
GCT
Ser
>WENV180829822
ODKB01000001
24174
Bacteroidota
GCT
Ser
>WENV180830247
ODKB01001198
343560
Bacteroidota
TCG
Arg
>WENV180829846
ODKB01000010
340029
Bacteroidota
TTC
Glu
>WENV180829847
ODKB01000010
340029
Bacteroidota
TTC
Glu
>WENV180830128
ODKB01000480
413663
Bacteroidota
CTG
Gln
>WENV180830530
ODKB01005179
237797
Bacteroidota
CCA
Trp
>WENV180831364
ODKB01118746
128178
Bacteroidota
TAC
Val
>WENV180831363
ODKB01118746
128178
Bacteroidota
TAC
Val
>WENV180830268
ODKB01001330
148096
Bacteroidota
GTG
His
>WENV180830117
ODKB01000442
144695
Bacteroidota
CAT
Met
>WENV180831388
ODKB01137281
238811
Bacteroidota
CAT
Met
>WENV180830078
ODKB01000327
238811
Bacteroidota
CAT
Met
>WENV180830060
ODKB01000262
238811
Bacteroidota
CAT
Met
>WENV180831208
ODKB01056882
412479
Bacteroidota
TTG
Gln
>WENV180830398
ODKB01002651
80835
Bacteroidota
GTA
Tyr
>WENV180829852
ODKB01000011
80835
Bacteroidota
GTA
Tyr
>WENV180830044
ODKB01000214
127221
Bacteroidota
TAC
Val
>WENV180830217
ODKB01000889
147147
Bacteroidota
GTG
His
>WENV180830480
ODKB01004138
155123
Bacteroidota
GTT
Asn
>WENV180830429
ODKB01003064
155123
Bacteroidota
GTT
Asn
>WENV180830321
ODKB01001688
155123
Bacteroidota
GTT
Asn
>WENV180831491
ODKB01240000
155123
Bacteroidota
GTT
Asn
>WENV180830481
ODKB01004138
155123
Bacteroidota
GTT
Asn
>WENV180831477
ODKB01227291
146800
Bacteroidota
>WENV180830043
ODKB01000214
126641
Bacteroidota
TAC
Val
>WENV180829931
ODKB01000057
412439
Bacteroidota
CCA
Trp
>WENV180830477
ODKB01004082
238810
Bacteroidota
CGG
Pro
>WENV180830054
ODKB01000233
238810
Bacteroidota
CGG
Pro
>WENV180831063
ODKB01033551
127253
Bacteroidota
GGG
Pro
>WENV180830050
ODKB01000221
127253
Bacteroidota
GGG
Pro
>WENV180829924
ODKB01000054
127253
Bacteroidota
GGG
Pro
>WENV180829929
ODKB01000056
238671
Bacteroidota
TTT
Lys
>WENV180829927
ODKB01000056
238671
Bacteroidota
TTT
Lys
>WENV180831464
ODKB01214482
37076
Bacteroidota
TAA
Leu
>WENV180830555
ODKB01005733
37076
Bacteroidota
TAA
Leu
>WENV180830213
ODKB01000859
37076
Bacteroidota
TAA
Leu
>WENV180830141
ODKB01000545
37076
Bacteroidota
TAA
Leu
>WENV180830039
ODKB01000207
37076
Bacteroidota
TAA
Leu
>WENV180831446
ODKB01200553
155147
Bacteroidota
GGC
Ala
>WENV180830107
ODKB01000400
147939
Bacteroidota
CAT
Met
>WENV180830534
ODKB01005293
339634
Bacteroidota
CCT
Arg
>WENV180830746
ODKB01011032
149691
Bacteroidota
GTT
Asn
>WENV180830745
ODKB01011032
149691
Bacteroidota
GTT
Asn
>WENV180830744
ODKB01011032
149691
Bacteroidota
GTT
Asn
>WENV180830854
ODKB01015685
81773
Bacteroidota
CAG
Leu
>WENV180830251
ODKB01001260
96109
Bacteroidota
TAG
Leu
>WENV180831482
ODKB01234898
96147
Bacteroidota
TAG
Leu
>WENV180830764
ODKB01012364
96147
Bacteroidota
TAG
Leu
>WENV180831025
ODKB01029617
16898
Bacteroidota
GGA
Ser
>WENV180830939
ODKB01020974
148247
Bacteroidota
TGC
Ala
>WENV180830173
ODKB01000684
147944
Bacteroidota
TCT
Arg
>WENV180830102
ODKB01000384
412235
Bacteroidota
>WENV180831064
ODKB01033592
344769
Bacteroidota
CTC
Glu
>WENV180830215
ODKB01000872
344769
Bacteroidota
CTC
Glu
>WENV180829984
ODKB01000140
344769
Bacteroidota
CTC
Glu
>WENV180829970
ODKB01000117
344769
Bacteroidota
CTC
Glu
>WENV180830353
ODKB01002008
339996
Bacteroidota
TTC
Glu
>WENV180830180
ODKB01000712
147148
Bacteroidota
CAT
Met
>WENV180830019
ODKB01000185
147148
Bacteroidota
CAT
Met
>WENV180829844
ODKB01000010
236055
Bacteroidota
TCC
Gly
>WENV180829826
ODKB01000001
59182
Bacteroidota
GAG
Leu
>WENV180831169
ODKB01050365
144639
Bacteroidota
GGC
Ala
>WENV180831060
ODKB01032875
95875
Bacteroidota
TAG
Leu
>WENV180830677
ODKB01009209
151121
Bacteroidota
CAT
Met
>WENV180830966
ODKB01022854
240012
Bacteroidota
CCC
Gly
>WENV180830674
ODKB01009113
244299
Bacteroidota
CGG
Pro
>WENV180830855
ODKB01015685
60485
Bacteroidota
GAG
Leu
>WENV180830875
ODKB01017019
127951
Bacteroidota
TAC
Val
>WENV180830874
ODKB01017019
127951
Bacteroidota
TAC
Val
>WENV180831458
ODKB01211811
95986
Bacteroidota
GTA
Tyr
>WENV180830352
ODKB01002004
95986
Bacteroidota
GTA
Tyr
>WENV180830163
ODKB01000640
95986
Bacteroidota
GTA
Tyr
>WENV180829993
ODKB01000154
95986
Bacteroidota
GTA
Tyr
>WENV180830063
ODKB01000280
16494
Bacteroidota
GGA
Ser
>WENV180830296
ODKB01001476
147945
Bacteroidota
CAT
Met
>WENV180830554
ODKB01005715
238607
Bacteroidota
TTT
Lys
>WENV180830507
ODKB01004666
238607
Bacteroidota
TTT
Lys
>WENV180830192
ODKB01000773
238607
Bacteroidota
TTT
Lys
>WENV180830052
ODKB01000227
238607
Bacteroidota
TTT
Lys
>WENV180831072
ODKB01035078
145555
Bacteroidota
GTC
Asp
>WENV180831010
ODKB01027179
145555
Bacteroidota
GTC
Asp
>WENV180830773
ODKB01012688
145555
Bacteroidota
GTC
Asp
>WENV180830451
ODKB01003767
145555
Bacteroidota
GTC
Asp
>WENV180830395
ODKB01002615
244297
Bacteroidota
CTT
Lys
>WENV180830369
ODKB01002272
244297
Bacteroidota
CTT
Lys
>WENV180830581
ODKB01006281
342206
Bacteroidota
TTC
Glu
>WENV180829875
ODKB01000020
239856
Bacteroidota
GCC
Gly
>WENV180831212
ODKB01057397
146762
Bacteroidota
TGG
Pro
>WENV180830168
ODKB01000673
146762
Bacteroidota
TGG
Pro
>WENV180831223
ODKB01061194
412236
Bacteroidota
CCC
Gly
>WENV180829964
ODKB01000098
412236
Bacteroidota
CCC
Gly
>WENV180830121
ODKB01000459
146764
Bacteroidota
GTC
Asp
>WENV180829845
ODKB01000010
342729
Bacteroidota
GGT
Thr
>WENV180829874
ODKB01000020
96124
Bacteroidota
TAG
Leu
>WENV180831376
ODKB01129468
59498
Bacteroidota
GAG
Leu
>WENV180830274
ODKB01001385
59498
Bacteroidota
GAG
Leu
>WENV180830098
ODKB01000366
59498
Bacteroidota
GAG
Leu
>WENV180829859
ODKB01000012
59498
Bacteroidota
GAG
Leu
>WENV180829853
ODKB01000012
59498
Bacteroidota
GAG
Leu
>WENV180831224
ODKB01061301
414472
Bacteroidota
TTG
Gln
>WENV180829930
ODKB01000057
413546
Bacteroidota
GCA
Cys
>WENV180830219
ODKB01000927
127023
Bacteroidota
GGG
Pro
>WENV180829842
ODKB01000010
147941
Bacteroidota
TGT
Thr
>WENV180830620
ODKB01007391
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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