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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180896842
ODNI01002693
243647
Bacillota
TTT
Lys
>WENV180896866
ODNI01002860
243647
Bacillota
TTT
Lys
>WENV180897775
ODNI01078296
243647
Bacillota
TTT
Lys
>WENV180895937
ODNI01000002
339630
Bacillota
GCC
Gly
>WENV180896663
ODNI01001491
16842
Bacillota
CGA
Ser
>WENV180896697
ODNI01001658
16842
Bacillota
CGA
Ser
>WENV180896279
ODNI01000261
37213
Bacillota
TGA
Ser
>WENV180897066
ODNI01006011
37213
Bacillota
TGA
Ser
>WENV180897080
ODNI01006261
342730
Bacillota
CTC
Glu
>WENV180897081
ODNI01006261
342730
Bacillota
CTC
Glu
>WENV180896762
ODNI01002173
235693
Bacillota
GGT
Thr
>WENV180897523
ODNI01035829
235693
Bacillota
GGT
Thr
>WENV180897637
ODNI01047735
246392
Bacillota
GTT
Asn
>WENV180896892
ODNI01003168
246392
Bacillota
GTT
Asn
>WENV180896857
ODNI01002831
338152
Bacillota
TTC
Glu
>WENV180896575
ODNI01001095
340263
Bacillota
TTC
Glu
>WENV180896322
ODNI01000331
235154
Bacillota
GTT
Asn
>WENV180897244
ODNI01010912
37549
Bacillota
TAA
Leu
>WENV180897986
ODNI01160268
148348
Bacillota
GTC
Asp
>WENV180896576
ODNI01001095
148348
Bacillota
GTC
Asp
>WENV180897568
ODNI01040250
243099
Bacillota
GTT
Asn
>WENV180896888
ODNI01003148
243099
Bacillota
GTT
Asn
>WENV180896737
ODNI01001940
147691
Bacillota
GAT
Ile
>WENV180896140
ODNI01000134
411591
Bacillota
GGT
Thr
>WENV180897563
ODNI01038520
239080
Bacillota
CTG
Gln
>WENV180897084
ODNI01006308
239080
Bacillota
CTG
Gln
>WENV180897853
ODNI01098786
243119
Bacillota
CTT
Lys
>WENV180896913
ODNI01003463
243119
Bacillota
CTT
Lys
>WENV180897989
ODNI01160496
235150
Bacillota
TGC
Ala
>WENV180897967
ODNI01152323
235150
Bacillota
TGC
Ala
>WENV180897703
ODNI01059884
235150
Bacillota
TGC
Ala
>WENV180897542
ODNI01036510
235150
Bacillota
TGC
Ala
>WENV180896949
ODNI01004011
152047
Bacillota
GGG
Pro
>WENV180897114
ODNI01006599
413601
Bacillota
GCA
Cys
>WENV180897741
ODNI01070486
235137
Bacillota
TGC
Ala
>WENV180897635
ODNI01047373
235137
Bacillota
TGC
Ala
>WENV180897587
ODNI01042188
235137
Bacillota
TGC
Ala
>WENV180897641
ODNI01047735
241761
Bacillota
TAC
Val
>WENV180897572
ODNI01040250
241761
Bacillota
TAC
Val
>WENV180896894
ODNI01003168
241761
Bacillota
TAC
Val
>WENV180897315
ODNI01015064
16834
Bacillota
GCT
Ser
>WENV180897199
ODNI01009358
16834
Bacillota
GCT
Ser
>WENV180896801
ODNI01002411
239076
Bacillota
GAA
Phe
>WENV180896577
ODNI01001095
239076
Bacillota
GAA
Phe
>WENV180897975
ODNI01154237
243646
Bacillota
GTT
Asn
>WENV180897912
ODNI01125332
243646
Bacillota
GTT
Asn
>WENV180897879
ODNI01110110
243646
Bacillota
GTT
Asn
>WENV180897807
ODNI01085355
243646
Bacillota
GTT
Asn
>WENV180897267
ODNI01012125
243646
Bacillota
GTT
Asn
>WENV180896865
ODNI01002860
243646
Bacillota
GTT
Asn
>WENV180896841
ODNI01002693
243646
Bacillota
GTT
Asn
>WENV180897471
ODNI01027123
114002
Bacillota
CAA
Leu
>WENV180897089
ODNI01006465
342736
Bacillota
TTG
Gln
>WENV180896869
ODNI01003008
37437
Bacillota
TAA
Leu
>WENV180896644
ODNI01001411
37437
Bacillota
TAA
Leu
>WENV180897730
ODNI01066887
340265
Bacillota
GCC
Gly
>WENV180897636
ODNI01047735
340265
Bacillota
GCC
Gly
>WENV180897242
ODNI01010912
340265
Bacillota
GCC
Gly
>WENV180896635
ODNI01001348
340265
Bacillota
GCC
Gly
>WENV180896634
ODNI01001346
340265
Bacillota
GCC
Gly
>WENV180897903
ODNI01120824
113951
Bacillota
GTA
Tyr
>WENV180897193
ODNI01009146
113951
Bacillota
GTA
Tyr
>WENV180897969
ODNI01152772
243612
Bacillota
TAC
Val
>WENV180897872
ODNI01107177
243612
Bacillota
TAC
Val
>WENV180897809
ODNI01085355
243612
Bacillota
TAC
Val
>WENV180897552
ODNI01037595
243612
Bacillota
TAC
Val
>WENV180897269
ODNI01012125
243612
Bacillota
TAC
Val
>WENV180896844
ODNI01002693
243612
Bacillota
TAC
Val
>WENV180897586
ODNI01042030
149041
Bacillota
GTC
Asp
>WENV180896807
ODNI01002411
81382
Bacillota
GAG
Leu
>WENV180896805
ODNI01002411
81382
Bacillota
GAG
Leu
>WENV180897854
ODNI01098786
144766
Bacillota
CAT
Met
>WENV180896755
ODNI01002155
37269
Bacillota
TGA
Ser
>WENV180897335
ODNI01016641
155089
Bacillota
CAT
Met
>WENV180896422
ODNI01000615
155089
Bacillota
CAT
Met
>WENV180897488
ODNI01029263
37551
Bacillota
CGA
Ser
>WENV180896390
ODNI01000517
341796
Bacillota
CCG
Arg
>WENV180897467
ODNI01026309
81373
Bacillota
GTA
Tyr
>WENV180896691
ODNI01001599
81373
Bacillota
GTA
Tyr
>WENV180896689
ODNI01001599
81373
Bacillota
GTA
Tyr
>WENV180896235
ODNI01000221
81373
Bacillota
GTA
Tyr
>WENV180897767
ODNI01075809
147135
Bacillota
ACG
Arg
>WENV180897574
ODNI01040315
144599
Bacillota
GTC
Asp
>WENV180896799
ODNI01002405
148268
Bacillota
CGG
Pro
>WENV180897540
ODNI01036244
242848
Bacillota
GAA
Phe
>WENV180897060
ODNI01005809
342895
Bacillota
CAT
Met
>WENV180896509
ODNI01000870
10680
Bacillota
GGA
Ser
>WENV180897934
ODNI01137375
236044
Bacillota
CAT
Met
>WENV180897577
ODNI01041080
243399
Bacillota
CCA
Trp
>WENV180897852
ODNI01098622
241471
Bacillota
TGC
Ala
>WENV180897820
ODNI01087684
241471
Bacillota
TGC
Ala
>WENV180897800
ODNI01084516
241471
Bacillota
TGC
Ala
>WENV180897757
ODNI01073648
241471
Bacillota
TGC
Ala
>WENV180897687
ODNI01056870
241471
Bacillota
TGC
Ala
>WENV180897662
ODNI01052263
241471
Bacillota
TGC
Ala
>WENV180897526
ODNI01035830
241471
Bacillota
TGC
Ala
>WENV180897535
ODNI01036244
148057
Bacillota
CAT
Met
>WENV180897192
ODNI01009138
96694
Bacillota
TAG
Leu
>WENV180896798
ODNI01002388
96694
Bacillota
TAG
Leu
>WENV180897402
ODNI01020747
239079
Bacillota
TAC
Val
>WENV180897434
ODNI01022959
147717
Bacillota
TGG
Pro
>WENV180896763
ODNI01002173
152045
Bacillota
CAT
Met
>WENV180897756
ODNI01073368
235701
Bacillota
TTT
Lys
>WENV180897353
ODNI01017483
235877
Bacillota
TGC
Ala
>WENV180895946
ODNI01000002
154711
Bacillota
TGG
Pro
>WENV180895945
ODNI01000002
154711
Bacillota
TGG
Pro
>WENV180897758
ODNI01073648
152019
Bacillota
GAT
Ile
>WENV180897135
ODNI01007156
152046
Bacillota
TCT
Arg
>WENV180897483
ODNI01028464
237846
Bacillota
GCC
Gly
>WENV180897381
ODNI01019712
237846
Bacillota
GCC
Gly
>WENV180896233
ODNI01000220
237846
Bacillota
GCC
Gly
>WENV180896232
ODNI01000220
237846
Bacillota
GCC
Gly
>WENV180896098
ODNI01000085
237846
Bacillota
GCC
Gly
>WENV180897976
ODNI01155526
235197
Bacillota
GTC
Asp
>WENV180897722
ODNI01064519
235197
Bacillota
GTC
Asp
>WENV180897458
ODNI01026208
235197
Bacillota
GTC
Asp
>WENV180896656
ODNI01001438
342061
Bacillota
GCA
Cys
>WENV180897578
ODNI01041080
152051
Bacillota
ACG
Arg
>WENV180897571
ODNI01040250
241526
Bacillota
CTT
Lys
>WENV180896443
ODNI01000680
241526
Bacillota
CTT
Lys
>WENV180897107
ODNI01006599
235807
Bacillota
CAT
Met
>WENV180897790
ODNI01082764
147183
Bacillota
GTT
Asn
>WENV180897462
ODNI01026232
147183
Bacillota
GTT
Asn
>WENV180897133
ODNI01007109
147183
Bacillota
GTT
Asn
>WENV180897369
ODNI01018866
243613
Bacillota
GTG
His
>WENV180896299
ODNI01000285
144672
Bacillota
TCT
Arg
>WENV180897350
ODNI01017399
127572
Bacillota
ACG
Arg
>WENV180896599
ODNI01001160
148495
Bacillota
TCT
Arg
>WENV180897524
ODNI01035829
152491
Bacillota
CAT
Met
>WENV180897668
ODNI01053250
144762
Bacillota
TCT
Arg
>WENV180896584
ODNI01001141
241638
Bacillota
GTG
His
>WENV180897108
ODNI01006599
237681
Bacillota
GTC
Asp
>WENV180897339
ODNI01016765
413657
Bacillota
CCC
Gly
>WENV180896914
ODNI01003488
152018
Bacillota
CCT
Arg
>WENV180896806
ODNI01002411
81598
Bacillota
CAG
Leu
>WENV180896055
ODNI01000051
238945
Bacillota
GCC
Gly
>WENV180895944
ODNI01000002
238857
Bacillota
CCA
Trp
>WENV180897182
ODNI01008890
413179
Bacillota
CCC
Gly
>WENV180897370
ODNI01018866
343027
Bacillota
TTG
Gln
>WENV180897185
ODNI01008952
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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