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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181097327
OECA01006091
412480
Bacteroidota
>WENV181096568
OECA01000011
95987
Bacteroidota
CAA
Leu
>WENV181097003
OECA01001555
95987
Bacteroidota
CAA
Leu
>WENV181096562
OECA01000005
141635
Bacteroidota
TAC
Val
>WENV181096571
OECA01000014
141635
Bacteroidota
TAC
Val
>WENV181096787
OECA01000328
141635
Bacteroidota
TAC
Val
>WENV181097059
OECA01001871
141635
Bacteroidota
TAC
Val
>WENV181097161
OECA01003134
141635
Bacteroidota
TAC
Val
>WENV181098291
OECA01187730
141635
Bacteroidota
TAC
Val
>WENV181096671
OECA01000123
339412
Bacteroidota
GGT
Thr
>WENV181096744
OECA01000212
339412
Bacteroidota
GGT
Thr
>WENV181097531
OECA01011193
339412
Bacteroidota
GGT
Thr
>WENV181096772
OECA01000273
148097
Bacteroidota
TGG
Pro
>WENV181096715
OECA01000175
237796
Bacteroidota
CGT
Thr
>WENV181096777
OECA01000273
237796
Bacteroidota
CGT
Thr
>WENV181097817
OECA01031012
306609
Bacteroidota
GAA
Phe
>WENV181098225
OECA01146127
97610
Bacteroidota
GTA
Tyr
>WENV181097453
OECA01009466
97610
Bacteroidota
GTA
Tyr
>WENV181096774
OECA01000273
97336
Bacteroidota
CAG
Leu
>WENV181098201
OECA01134172
119907
Bacteroidota
CAA
Leu
>WENV181097504
OECA01010759
339341
Bacteroidota
GGT
Thr
>WENV181097874
OECA01038703
340120
Bacteroidota
CCT
Arg
>WENV181096621
OECA01000039
24174
Bacteroidota
GCT
Ser
>WENV181096548
OECA01000001
24174
Bacteroidota
GCT
Ser
>WENV181097803
OECA01028508
338486
Bacteroidota
CAT
Met
>WENV181097947
OECA01047597
258903
Bacteroidota
>WENV181097873
OECA01038659
394247
Bacteroidota
CTC
Glu
>WENV181096987
OECA01001432
394247
Bacteroidota
CTC
Glu
>WENV181096986
OECA01001432
394247
Bacteroidota
CTC
Glu
>WENV181097889
OECA01039618
340029
Bacteroidota
TTC
Glu
>WENV181097333
OECA01006211
413663
Bacteroidota
CTG
Gln
>WENV181096666
OECA01000121
136244
Bacteroidota
TAC
Val
>WENV181097532
OECA01011193
237797
Bacteroidota
CCA
Trp
>WENV181096672
OECA01000123
237797
Bacteroidota
CCA
Trp
>WENV181096944
OECA01001092
148096
Bacteroidota
GTG
His
>WENV181097852
OECA01036456
144695
Bacteroidota
CAT
Met
>WENV181097377
OECA01007029
413952
Bacteroidota
>WENV181097117
OECA01002574
413952
Bacteroidota
>WENV181096709
OECA01000169
238811
Bacteroidota
CAT
Met
>WENV181096629
OECA01000048
238811
Bacteroidota
CAT
Met
>WENV181096765
OECA01000258
412479
Bacteroidota
TTG
Gln
>WENV181097642
OECA01018297
237247
Bacteroidota
TTT
Lys
>WENV181096984
OECA01001429
147147
Bacteroidota
GTG
His
>WENV181096785
OECA01000314
155123
Bacteroidota
GTT
Asn
>WENV181096697
OECA01000165
155123
Bacteroidota
GTT
Asn
>WENV181097452
OECA01009466
145504
Bacteroidota
TGT
Thr
>WENV181098030
OECA01065987
320713
Bacteroidota
TTT
Lys
>WENV181097326
OECA01006022
412439
Bacteroidota
CCA
Trp
>WENV181096861
OECA01000584
238810
Bacteroidota
CGG
Pro
>WENV181096797
OECA01000380
193809
Bacteroidota
CAT
Met
>WENV181096824
OECA01000454
127253
Bacteroidota
GGG
Pro
>WENV181097555
OECA01012886
238671
Bacteroidota
TTT
Lys
>WENV181097731
OECA01022844
37076
Bacteroidota
TAA
Leu
>WENV181096864
OECA01000602
37076
Bacteroidota
TAA
Leu
>WENV181096855
OECA01000573
37076
Bacteroidota
TAA
Leu
>WENV181096747
OECA01000216
37076
Bacteroidota
TAA
Leu
>WENV181098184
OECA01116834
191087
Bacteroidota
TCT
Arg
>WENV181097814
OECA01029913
147939
Bacteroidota
CAT
Met
>WENV181098205
OECA01135891
141414
Bacteroidota
GGG
Pro
>WENV181098031
OECA01065987
60822
Bacteroidota
GAG
Leu
>WENV181097004
OECA01001560
339634
Bacteroidota
CCT
Arg
>WENV181096742
OECA01000198
339634
Bacteroidota
CCT
Arg
>WENV181097732
OECA01022856
414526
Bacteroidota
GCA
Cys
>WENV181097809
OECA01029272
136207
Bacteroidota
TAC
Val
>WENV181097405
OECA01007880
136207
Bacteroidota
TAC
Val
>WENV181097404
OECA01007880
136207
Bacteroidota
TAC
Val
>WENV181097423
OECA01008661
130479
Bacteroidota
TAC
Val
>WENV181097456
OECA01009661
81773
Bacteroidota
CAG
Leu
>WENV181097102
OECA01002402
96109
Bacteroidota
TAG
Leu
>WENV181096870
OECA01000650
96147
Bacteroidota
TAG
Leu
>WENV181097174
OECA01003399
16898
Bacteroidota
GGA
Ser
>WENV181097518
OECA01011059
148247
Bacteroidota
TGC
Ala
>WENV181096835
OECA01000522
412235
Bacteroidota
>WENV181096808
OECA01000407
339996
Bacteroidota
TTC
Glu
>WENV181096762
OECA01000251
147148
Bacteroidota
CAT
Met
>WENV181096665
OECA01000113
147148
Bacteroidota
CAT
Met
>WENV181097828
OECA01032640
175704
Bacteroidota
TGC
Ala
>WENV181097265
OECA01004660
59182
Bacteroidota
GAG
Leu
>WENV181096681
OECA01000143
59182
Bacteroidota
GAG
Leu
>WENV181096678
OECA01000136
59182
Bacteroidota
GAG
Leu
>WENV181096552
OECA01000003
59182
Bacteroidota
GAG
Leu
>WENV181097645
OECA01018377
144639
Bacteroidota
GGC
Ala
>WENV181097961
OECA01050403
263771
Bacteroidota
CTT
Lys
>WENV181096771
OECA01000271
151121
Bacteroidota
CAT
Met
>WENV181097291
OECA01005098
240012
Bacteroidota
CCC
Gly
>WENV181097558
OECA01012968
251411
Bacteroidota
GAA
Phe
>WENV181097665
OECA01019517
369111
Bacteroidota
TTC
Glu
>WENV181097076
OECA01001968
127951
Bacteroidota
TAC
Val
>WENV181098270
OECA01174325
95986
Bacteroidota
GTA
Tyr
>WENV181098105
OECA01084162
95986
Bacteroidota
GTA
Tyr
>WENV181097565
OECA01013575
95986
Bacteroidota
GTA
Tyr
>WENV181097086
OECA01002074
95986
Bacteroidota
GTA
Tyr
>WENV181097060
OECA01001871
95986
Bacteroidota
GTA
Tyr
>WENV181096670
OECA01000123
95986
Bacteroidota
GTA
Tyr
>WENV181098097
OECA01080209
16494
Bacteroidota
GGA
Ser
>WENV181098280
OECA01185911
196394
Bacteroidota
GTC
Asp
>WENV181098265
OECA01172832
196394
Bacteroidota
GTC
Asp
>WENV181097336
OECA01006333
196394
Bacteroidota
GTC
Asp
>WENV181096892
OECA01000798
196394
Bacteroidota
GTC
Asp
>WENV181097638
OECA01018127
147945
Bacteroidota
CAT
Met
>WENV181097234
OECA01004308
238607
Bacteroidota
TTT
Lys
>WENV181097868
OECA01038099
159335
Bacteroidota
GTT
Asn
>WENV181097475
OECA01010230
146762
Bacteroidota
TGG
Pro
>WENV181096631
OECA01000058
146762
Bacteroidota
TGG
Pro
>WENV181096778
OECA01000273
412236
Bacteroidota
CCC
Gly
>WENV181096716
OECA01000175
412236
Bacteroidota
CCC
Gly
>WENV181097176
OECA01003441
412423
Bacteroidota
CTG
Gln
>WENV181096607
OECA01000024
146764
Bacteroidota
GTC
Asp
>WENV181096606
OECA01000024
146764
Bacteroidota
GTC
Asp
>WENV181097424
OECA01008661
133943
Bacteroidota
TAC
Val
>WENV181097663
OECA01019366
128249
Bacteroidota
TGG
Pro
>WENV181096974
OECA01001367
96124
Bacteroidota
TAG
Leu
>WENV181098079
OECA01076772
59498
Bacteroidota
GAG
Leu
>WENV181097851
OECA01036077
59498
Bacteroidota
GAG
Leu
>WENV181097320
OECA01005792
59498
Bacteroidota
GAG
Leu
>WENV181096775
OECA01000273
59498
Bacteroidota
GAG
Leu
>WENV181097666
OECA01019532
302002
Bacteroidota
CGT
Thr
>WENV181096810
OECA01000414
127023
Bacteroidota
GGG
Pro
>WENV181097220
OECA01004013
235129
Bacteroidota
GCC
Gly
>WENV181097571
OECA01014183
313363
Bacteroidota
GAA
Phe
>WENV181097014
OECA01001658
313363
Bacteroidota
GAA
Phe
>WENV181096993
OECA01001470
313363
Bacteroidota
GAA
Phe
>WENV181097997
OECA01056230
345164
Bacteroidota
CCT
Arg
>WENV181097835
OECA01034338
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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