This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
141 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1005383
SRR006907.230178
56094
Gammaproteobacteria
TGA
Ser
>SRA1005112
SRR006907.37251
400354
Gammaproteobacteria
TTG
Gln
>SRA1005226
SRR006907.122924
398943
Gammaproteobacteria
GAC
Val
>SRA1005198
SRR006907.97317
301064
Gammaproteobacteria
TTT
Lys
>SRA1005395
SRR006907.243859
301064
Gammaproteobacteria
TTT
Lys
>SRA1004530
SRR006906.59271
280849
Gammaproteobacteria
GTT
Asn
>SRA1004664
SRR006906.96958
280849
Gammaproteobacteria
GTT
Asn
>SRA1004822
SRR006906.147973
176007
Gammaproteobacteria
TCT
Arg
>SRA1004895
SRR006906.175357
176007
Gammaproteobacteria
TCT
Arg
>SRA1004942
SRR006906.190279
176007
Gammaproteobacteria
TCT
Arg
>SRA1004944
SRR006906.190686
176007
Gammaproteobacteria
TCT
Arg
>SRA1004984
SRR006906.209329
176007
Gammaproteobacteria
TCT
Arg
>SRA1004988
SRR006906.210913
176007
Gammaproteobacteria
TCT
Arg
>SRA1004499
SRR006906.51969
280672
Gammaproteobacteria
GGT
Thr
>SRA1004616
SRR006906.86394
296672
Gammaproteobacteria
GGT
Thr
>SRA1004546
SRR006906.64360
176614
Gammaproteobacteria
GAC
Val
>SRA1004809
SRR006906.143665
176614
Gammaproteobacteria
GAC
Val
>SRA1004697
SRR006906.106048
210963
Gammaproteobacteria
GAT
Ile
>SRA1004755
SRR006906.124788
400763
Gammaproteobacteria
TTG
Gln
>SRA1004802
SRR006906.142799
400763
Gammaproteobacteria
TTG
Gln
>SRA1004657
SRR006906.95702
218621
Gammaproteobacteria
TGG
Pro
>SRA1004751
SRR006906.123664
218621
Gammaproteobacteria
TGG
Pro
>SRA1004648
SRR006906.93967
178471
Gammaproteobacteria
GTT
Asn
>SRA1004776
SRR006906.134549
178471
Gammaproteobacteria
GTT
Asn
>SRA1004788
SRR006906.137862
179284
Gammaproteobacteria
CAT
Met
>SRA1004656
SRR006906.95702
281215
Gammaproteobacteria
GTG
His
>SRA1004718
SRR006906.112193
281215
Gammaproteobacteria
GTG
His
>SRA1004750
SRR006906.123664
281215
Gammaproteobacteria
GTG
His
>SRA1004698
SRR006906.106276
20231
Gammaproteobacteria
TGA
Ser
>SRA1004726
SRR006906.114851
20231
Gammaproteobacteria
TGA
Ser
>SRA1004767
SRR006906.131745
20231
Gammaproteobacteria
TGA
Ser
>SRA1004769
SRR006906.131834
20231
Gammaproteobacteria
TGA
Ser
>SRA1004898
SRR006906.176060
20231
Gammaproteobacteria
TGA
Ser
>SRA1004905
SRR006906.177168
20231
Gammaproteobacteria
TGA
Ser
>SRA1004909
SRR006906.181083
20231
Gammaproteobacteria
TGA
Ser
>SRA1004915
SRR006906.183708
20231
Gammaproteobacteria
TGA
Ser
>SRA1004840
SRR006906.159835
411339
Gammaproteobacteria
CCG
Arg
>SRA1004906
SRR006906.178157
411339
Gammaproteobacteria
CCG
Arg
>SRA1004472
SRR006906.42039
237365
Gammaproteobacteria
TCT
Arg
>SRA1004794
SRR006906.138271
237365
Gammaproteobacteria
TCT
Arg
>SRA1004838
SRR006906.158672
94792
Gammaproteobacteria
TAA
Leu
>SRA1004548
SRR006906.64823
280808
Gammaproteobacteria
>SRA1004553
SRR006906.67215
280808
Gammaproteobacteria
>SRA1004556
SRR006906.67437
280808
Gammaproteobacteria
>SRA1004560
SRR006906.68491
280808
Gammaproteobacteria
>SRA1004589
SRR006906.77610
280808
Gammaproteobacteria
>SRA1004613
SRR006906.84525
280808
Gammaproteobacteria
>SRA1004702
SRR006906.106479
280808
Gammaproteobacteria
>SRA1004880
SRR006906.169171
280808
Gammaproteobacteria
>SRA1004954
SRR006906.196522
280808
Gammaproteobacteria
>SRA1004559
SRR006906.68441
140787
Gammaproteobacteria
GAG
Leu
>SRA1004695
SRR006906.105304
140787
Gammaproteobacteria
GAG
Leu
>SRA1004570
SRR006906.71846
118205
Gammaproteobacteria
GTA
Tyr
>SRA1004889
SRR006906.173815
118205
Gammaproteobacteria
GTA
Tyr
>SRA1004660
SRR006906.96168
398932
Gammaproteobacteria
TTG
Gln
>SRA1004893
SRR006906.174778
231799
Gammaproteobacteria
CCT
Arg
>SRA1004733
SRR006906.117921
400836
Gammaproteobacteria
TTG
Gln
>SRA1004787
SRR006906.137653
400836
Gammaproteobacteria
TTG
Gln
>SRA1004960
SRR006906.199131
400836
Gammaproteobacteria
TTG
Gln
>SRA1004470
SRR006906.41424
60942
Gammaproteobacteria
GGA
Ser
>SRA1004402
SRR006906.21192
400392
Gammaproteobacteria
TTT
Lys
>SRA1004395
SRR006906.18796
113312
Gammaproteobacteria
TAA
Leu
>SRA1004633
SRR006906.89444
113312
Gammaproteobacteria
TAA
Leu
>SRA1004834
SRR006906.156697
113312
Gammaproteobacteria
TAA
Leu
>SRA1004863
SRR006906.165012
113312
Gammaproteobacteria
TAA
Leu
>SRA1004867
SRR006906.166277
113312
Gammaproteobacteria
TAA
Leu
>SRA1005006
SRR006906.220501
113312
Gammaproteobacteria
TAA
Leu
>SRA1004392
SRR006906.18750
75013
Gammaproteobacteria
CAG
Leu
>SRA1004416
SRR006906.25744
75013
Gammaproteobacteria
CAG
Leu
>SRA1004605
SRR006906.82607
75013
Gammaproteobacteria
CAG
Leu
>SRA1004620
SRR006906.87489
75013
Gammaproteobacteria
CAG
Leu
>SRA1004859
SRR006906.164724
75013
Gammaproteobacteria
CAG
Leu
>SRA1004588
SRR006906.77610
238652
Gammaproteobacteria
CAT
Met
>SRA1004701
SRR006906.106479
238652
Gammaproteobacteria
CAT
Met
>SRA1004562
SRR006906.68775
328691
Gammaproteobacteria
GGT
Thr
>SRA1004766
SRR006906.130419
328691
Gammaproteobacteria
GGT
Thr
>SRA1004684
SRR006906.102094
25129
Gammaproteobacteria
TGA
Ser
>SRA1005032
SRR006906.233229
25129
Gammaproteobacteria
TGA
Ser
>SRA1004689
SRR006906.103014
220813
Gammaproteobacteria
CCG
Arg
>SRA1004916
SRR006906.184063
220813
Gammaproteobacteria
CCG
Arg
>SRA1005061
SRR006906.248500
220813
Gammaproteobacteria
CCG
Arg
>SRA1004580
SRR006906.76299
136568
Gammaproteobacteria
GTA
Tyr
>SRA1004474
SRR006906.42613
99868
Gammaproteobacteria
TAA
Leu
>SRA1004483
SRR006906.46432
346373
Gammaproteobacteria
GAA
Phe
>SRA1004891
SRR006906.174124
346373
Gammaproteobacteria
GAA
Phe
>SRA1005016
SRR006906.224296
346373
Gammaproteobacteria
GAA
Phe
>SRA1005010
SRR006906.221565
242720
Gammaproteobacteria
GAC
Val
>SRA1004878
SRR006906.169109
283497
Gammaproteobacteria
CAT
Met
>SRA1004427
SRR006906.28483
117813
Gammaproteobacteria
CAA
Leu
>SRA1004447
SRR006906.33051
319139
Gammaproteobacteria
GCC
Gly
>SRA1004674
SRR006906.99325
319139
Gammaproteobacteria
GCC
Gly
>SRA1004661
SRR006906.96168
176035
Gammaproteobacteria
CAT
Met
>SRA1004961
SRR006906.199131
176035
Gammaproteobacteria
CAT
Met
>SRA1004576
SRR006906.75136
118372
Gammaproteobacteria
TAG
Leu
>SRA1004756
SRR006906.124788
118372
Gammaproteobacteria
TAG
Leu
>SRA1004803
SRR006906.142799
118372
Gammaproteobacteria
TAG
Leu
>SRA1004894
SRR006906.175199
118372
Gammaproteobacteria
TAG
Leu
>SRA1004868
SRR006906.166289
315831
Gammaproteobacteria
GTC
Asp
>SRA1004845
SRR006906.160875
179889
Gammaproteobacteria
CCT
Arg
>SRA1005048
SRR006906.239951
179889
Gammaproteobacteria
CCT
Arg
>SRA1004612
SRR006906.84071
176173
Gammaproteobacteria
>SRA1004913
SRR006906.183334
176173
Gammaproteobacteria
>SRA1004443
SRR006906.31469
280851
Gammaproteobacteria
TAC
Val
>SRA1004552
SRR006906.66958
280851
Gammaproteobacteria
TAC
Val
>SRA1004784
SRR006906.136526
280851
Gammaproteobacteria
TAC
Val
>SRA1004832
SRR006906.155335
280851
Gammaproteobacteria
TAC
Val
>SRA1004881
SRR006906.169449
280851
Gammaproteobacteria
TAC
Val
>SRA1004945
SRR006906.192813
280851
Gammaproteobacteria
TAC
Val
>SRA1005003
SRR006906.219801
280851
Gammaproteobacteria
TAC
Val
>SRA1005037
SRR006906.235273
280851
Gammaproteobacteria
TAC
Val
>SRA1005047
SRR006906.239545
280851
Gammaproteobacteria
TAC
Val
>SRA1004506
SRR006906.53677
176827
Gammaproteobacteria
CCG
Arg
>SRA1004724
SRR006906.114484
176827
Gammaproteobacteria
CCG
Arg
>SRA1004672
SRR006906.98997
480510
Gammaproteobacteria
>SRA1004729
SRR006906.115542
480510
Gammaproteobacteria
>SRA1004745
SRR006906.121284
480510
Gammaproteobacteria
>SRA1004879
SRR006906.169171
480510
Gammaproteobacteria
>SRA1004883
SRR006906.170449
480510
Gammaproteobacteria
>SRA1004953
SRR006906.196522
480510
Gammaproteobacteria
>SRA1004378
SRR006906.16502
176039
Gammaproteobacteria
>SRA1005008
SRR006906.221290
176039
Gammaproteobacteria
>SRA1005055
SRR006906.245119
176039
Gammaproteobacteria
>SRA1004719
SRR006906.112865
280674
Gammaproteobacteria
TAC
Val
>SRA1004377
SRR006906.16502
8505
Gammaproteobacteria
GCT
Ser
>SRA1004366
SRR006906.12110
283227
Gammaproteobacteria
TAC
Val
>SRA1004627
SRR006906.88835
283227
Gammaproteobacteria
TAC
Val
>SRA1004393
SRR006906.18750
463398
Gammaproteobacteria
TTG
Gln
>SRA1004417
SRR006906.25744
463398
Gammaproteobacteria
TTG
Gln
>SRA1004606
SRR006906.82607
463398
Gammaproteobacteria
TTG
Gln
>SRA1004621
SRR006906.87489
463398
Gammaproteobacteria
TTG
Gln
>SRA1004777
SRR006906.134883
463398
Gammaproteobacteria
TTG
Gln
>SRA1004783
SRR006906.136336
463398
Gammaproteobacteria
TTG
Gln
>SRA1004860
SRR006906.164724
463398
Gammaproteobacteria
TTG
Gln
>SRA1004955
SRR006906.197527
463398
Gammaproteobacteria
TTG
Gln
>SRA1004541
SRR006906.63547
51866
Gammaproteobacteria
CGA
Ser
>SRA1004673
SRR006906.99314
290408
Gammaproteobacteria
GCC
Gly
>SRA1004641
SRR006906.93023
179286
Gammaproteobacteria
GGG
Pro
>SRA1004707
SRR006906.108967
179286
Gammaproteobacteria
GGG
Pro
>SRA1004405
SRR006906.22014
46677
Gammaproteobacteria
GGA
Ser
>SRA1004534
SRR006906.60369
46677
Gammaproteobacteria
GGA
Ser
>SRA1004455
SRR006906.36170
176628
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK