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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656116
JTFO01000231
180463
Betaproteobacteria
CAG
Leu
>WENV170656141
JTFO01000850
454464
Betaproteobacteria
TAC
Val
>WENV170656152
JTFO01001352
273687
Betaproteobacteria
CAT
Met
>WENV170656163
JTFO01002258
655110
Betaproteobacteria
CCT
Arg
>WENV170656171
JTFO01002756
454798
Betaproteobacteria
GTT
Asn
>WENV170656172
JTFO01002756
454799
Betaproteobacteria
CGT
Thr
>WENV170656179
JTFO01003215
298558
Betaproteobacteria
TGG
Pro
>WENV170656192
JTFO01003564
655109
Betaproteobacteria
CAC
Val
>WENV170656195
JTFO01003719
30508
Betaproteobacteria
GGA
Ser
>WENV170656196
JTFO01003742
655109
Betaproteobacteria
CAC
Val
>WENV170656204
JTFO01004298
655110
Betaproteobacteria
CCT
Arg
>WENV170656212
JTFO01004831
273691
Betaproteobacteria
ACG
Arg
>WENV170656213
JTFO01004831
273691
Betaproteobacteria
ACG
Arg
>WENV170656256
JTFO01007297
454801
Betaproteobacteria
TGT
Thr
>WENV170656268
JTFO01007483
780207
Betaproteobacteria
GCA
Cys
>WENV170656271
JTFO01007814
30508
Betaproteobacteria
GGA
Ser
>WENV170656289
JTFO01008958
780208
Betaproteobacteria
CCC
Gly
>WENV170656304
JTFO01009360
454799
Betaproteobacteria
CGT
Thr
>WENV170656349
JTFO01010865
282382
Betaproteobacteria
GAC
Val
>WENV170656370
JTFO01011515
780208
Betaproteobacteria
CCC
Gly
>WENV170656371
JTFO01011532
273689
Betaproteobacteria
TCT
Arg
>WENV170656389
JTFO01012307
273688
Betaproteobacteria
GAT
Ile
>WENV170656401
JTFO01012934
180463
Betaproteobacteria
CAG
Leu
>WENV170656402
JTFO01012934
180463
Betaproteobacteria
CAG
Leu
>WENV170656410
JTFO01013302
454800
Betaproteobacteria
CTT
Lys
>WENV170656440
JTFO01015581
454800
Betaproteobacteria
CTT
Lys
>WENV170656446
JTFO01016716
180273
Betaproteobacteria
TAG
Leu
>WENV170656462
JTFO01017615
273687
Betaproteobacteria
CAT
Met
>WENV170656463
JTFO01017726
12363
Betaproteobacteria
GCT
Ser
>WENV170656468
JTFO01018088
180273
Betaproteobacteria
TAG
Leu
>WENV170656495
JTFO01019457
458878
Betaproteobacteria
TTC
Glu
>WENV170656519
JTFO01021013
780210
Betaproteobacteria
TCC
Gly
>WENV170656521
JTFO01021014
112785
Betaproteobacteria
GTA
Tyr
>WENV170656522
JTFO01021014
780210
Betaproteobacteria
TCC
Gly
>WENV170656536
JTFO01022261
454117
Betaproteobacteria
GTT
Asn
>WENV170656538
JTFO01022620
273686
Betaproteobacteria
TTG
Gln
>WENV170656539
JTFO01022819
454798
Betaproteobacteria
GTT
Asn
>WENV170656567
JTFO01025676
273686
Betaproteobacteria
TTG
Gln
>WENV170656584
JTFO01026573
458878
Betaproteobacteria
TTC
Glu
>WENV170656663
JTFO01031331
30508
Betaproteobacteria
GGA
Ser
>WENV170656678
JTFO01032945
46024
Betaproteobacteria
TGA
Ser
>WENV170656679
JTFO01032945
154011
Betaproteobacteria
TAA
Leu
>WENV170656721
JTFO01038075
454801
Betaproteobacteria
TGT
Thr
>WENV170656799
JTFO01045660
273689
Betaproteobacteria
TCT
Arg
>WENV170656839
JTFO01050939
454798
Betaproteobacteria
GTT
Asn
>WENV170656843
JTFO01051362
180462
Betaproteobacteria
CAG
Leu
>WENV170656845
JTFO01051714
454799
Betaproteobacteria
CGT
Thr
>WENV170656850
JTFO01052153
46023
Betaproteobacteria
CGA
Ser
>WENV170656858
JTFO01052553
780207
Betaproteobacteria
GCA
Cys
>WENV170656859
JTFO01052554
780207
Betaproteobacteria
GCA
Cys
>WENV170656875
JTFO01053607
655108
Betaproteobacteria
CCG
Arg
>WENV170656876
JTFO01053780
12363
Betaproteobacteria
GCT
Ser
>WENV170656885
JTFO01055141
180463
Betaproteobacteria
CAG
Leu
>WENV170656888
JTFO01055448
454800
Betaproteobacteria
CTT
Lys
>WENV170656891
JTFO01055715
454803
Betaproteobacteria
TTT
Lys
>WENV170656899
JTFO01057151
46024
Betaproteobacteria
TGA
Ser
>WENV170656901
JTFO01058241
454801
Betaproteobacteria
TGT
Thr
>WENV170656953
JTFO01064344
454798
Betaproteobacteria
GTT
Asn
>WENV170656954
JTFO01064344
454798
Betaproteobacteria
GTT
Asn
>WENV170656959
JTFO01064797
454801
Betaproteobacteria
TGT
Thr
>WENV170657037
JTFO01071227
454798
Betaproteobacteria
GTT
Asn
>WENV170657069
JTFO01076173
273687
Betaproteobacteria
CAT
Met
>WENV170657091
JTFO01082444
454464
Betaproteobacteria
TAC
Val
>WENV170657093
JTFO01083073
112785
Betaproteobacteria
GTA
Tyr
>WENV170657094
JTFO01083073
780210
Betaproteobacteria
TCC
Gly
>WENV170657115
JTFO01087642
655110
Betaproteobacteria
CCT
Arg
>WENV170657116
JTFO01088038
454464
Betaproteobacteria
TAC
Val
>WENV170657128
JTFO01089357
180461
Betaproteobacteria
GAG
Leu
>WENV170657130
JTFO01089630
46024
Betaproteobacteria
TGA
Ser
>WENV170657134
JTFO01089981
780208
Betaproteobacteria
CCC
Gly
>WENV170657137
JTFO01090374
454798
Betaproteobacteria
GTT
Asn
>WENV170657144
JTFO01091445
655108
Betaproteobacteria
CCG
Arg
>WENV170657153
JTFO01092386
458878
Betaproteobacteria
TTC
Glu
>WENV170657154
JTFO01092539
454802
Betaproteobacteria
CCA
Trp
>WENV170657174
JTFO01096247
780210
Betaproteobacteria
TCC
Gly
>WENV170657187
JTFO01098431
273691
Betaproteobacteria
ACG
Arg
>WENV170657243
JTFO01109310
273689
Betaproteobacteria
TCT
Arg
>WENV170657248
JTFO01110541
454802
Betaproteobacteria
CCA
Trp
>WENV170657256
JTFO01112421
780207
Betaproteobacteria
GCA
Cys
>WENV170657263
JTFO01114016
655108
Betaproteobacteria
CCG
Arg
>WENV170657279
JTFO01116665
780210
Betaproteobacteria
TCC
Gly
>WENV170657299
JTFO01120884
273686
Betaproteobacteria
TTG
Gln
>WENV170657305
JTFO01121566
780210
Betaproteobacteria
TCC
Gly
>WENV170657318
JTFO01124083
454802
Betaproteobacteria
CCA
Trp
>WENV170657322
JTFO01124917
458878
Betaproteobacteria
TTC
Glu
>WENV170657325
JTFO01126213
273689
Betaproteobacteria
TCT
Arg
>WENV170657327
JTFO01126639
454799
Betaproteobacteria
CGT
Thr
>WENV170657332
JTFO01126868
780210
Betaproteobacteria
TCC
Gly
>WENV170657335
JTFO01127630
273693
Betaproteobacteria
GAC
Val
>WENV170657349
JTFO01132326
454798
Betaproteobacteria
GTT
Asn
>WENV170657359
JTFO01135043
298558
Betaproteobacteria
TGG
Pro
>WENV170657402
JTFO01142771
454800
Betaproteobacteria
CTT
Lys
>WENV170657410
JTFO01143755
30508
Betaproteobacteria
GGA
Ser
>WENV170657435
JTFO01150605
454803
Betaproteobacteria
TTT
Lys
>WENV170657437
JTFO01151897
46023
Betaproteobacteria
CGA
Ser
>WENV170657459
JTFO01158034
454802
Betaproteobacteria
CCA
Trp
>WENV170657467
JTFO01160436
454802
Betaproteobacteria
CCA
Trp
>WENV170657474
JTFO01162442
454802
Betaproteobacteria
CCA
Trp
>WENV170657483
JTFO01166009
112785
Betaproteobacteria
GTA
Tyr
>WENV170657484
JTFO01166009
780210
Betaproteobacteria
TCC
Gly
>WENV170657488
JTFO01167996
780210
Betaproteobacteria
TCC
Gly
>WENV170657490
JTFO01168016
180462
Betaproteobacteria
CAG
Leu
>WENV170657499
JTFO01170458
780210
Betaproteobacteria
TCC
Gly
>WENV170657510
JTFO01172085
46024
Betaproteobacteria
TGA
Ser
>WENV170657521
JTFO01178083
180463
Betaproteobacteria
CAG
Leu
>WENV170657525
JTFO01179389
655108
Betaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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