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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170669346
LAHS01000016
237135
Alphaproteobacteria
GTT
Asn
>WENV170669348
LAHS01000016
59064
Alphaproteobacteria
CAG
Leu
>WENV170669349
LAHS01000016
59064
Alphaproteobacteria
CAG
Leu
>WENV170669350
LAHS01000016
237153
Alphaproteobacteria
GAA
Phe
>WENV170669379
LAHS01000063
294226
Alphaproteobacteria
>WENV170669380
LAHS01000063
237132
Alphaproteobacteria
CGT
Thr
>WENV170669381
LAHS01000063
146577
Alphaproteobacteria
CCA
Trp
>WENV170669382
LAHS01000063
412075
Alphaproteobacteria
TCC
Gly
>WENV170669383
LAHS01000063
146600
Alphaproteobacteria
ACG
Arg
>WENV170669384
LAHS01000063
267306
Alphaproteobacteria
>WENV170669475
LAHS01000332
27408
Alphaproteobacteria
TGA
Ser
>WENV170669476
LAHS01000332
146583
Alphaproteobacteria
TGG
Pro
>WENV170669477
LAHS01000332
175744
Alphaproteobacteria
TCT
Arg
>WENV170669478
LAHS01000332
146580
Alphaproteobacteria
GGG
Pro
>WENV170669479
LAHS01000332
96210
Alphaproteobacteria
TAG
Leu
>WENV170669480
LAHS01000332
340314
Alphaproteobacteria
TAC
Val
>WENV170669496
LAHS01000342
412072
Alphaproteobacteria
CCC
Gly
>WENV170669497
LAHS01000342
87420
Alphaproteobacteria
GTA
Tyr
>WENV170669498
LAHS01000342
239167
Alphaproteobacteria
GTG
His
>WENV170669500
LAHS01000362
339290
Alphaproteobacteria
GGT
Thr
>WENV170669501
LAHS01000362
146578
Alphaproteobacteria
CGG
Pro
>WENV170669504
LAHS01000362
339291
Alphaproteobacteria
TGT
Thr
>WENV170669505
LAHS01000362
339292
Alphaproteobacteria
TTG
Gln
>WENV170669506
LAHS01000362
259252
Alphaproteobacteria
GGC
Ala
>WENV170669507
LAHS01000362
115236
Alphaproteobacteria
CAA
Leu
>WENV170669539
LAHS01000455
146597
Alphaproteobacteria
CAT
Met
>WENV170669540
LAHS01000455
339288
Alphaproteobacteria
GAC
Val
>WENV170669627
LAHS01000929
338631
Alphaproteobacteria
CAC
Val
>WENV170669649
LAHS01001063
82144
Alphaproteobacteria
GAG
Leu
>WENV170669650
LAHS01001063
340315
Alphaproteobacteria
CAT
Met
>WENV170669651
LAHS01001075
412073
Alphaproteobacteria
GCA
Cys
>WENV170669738
LAHS01002018
418532
Alphaproteobacteria
CTG
Gln
>WENV170670056
LAHS01022372
283763
Alphaproteobacteria
TGC
Ala
>WENV170670170
LAHS01080468
411617
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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