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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180043582
LQAI01001310
256453
Thermodesulfobacteriota
TGC
Ala
>WENV180043579
LQAI01001073
129717
Thermodesulfobacteriota
TTC
Glu
>WENV180043519
LQAI01000219
12283
Thermodesulfobacteriota
TGA
Ser
>WENV180043505
LQAI01000132
256456
Thermodesulfobacteriota
CAT
Met
>WENV180043676
LQAI01006630
154121
Thermodesulfobacteriota
GTC
Asp
>WENV180043584
LQAI01001364
165016
Thermodesulfobacteriota
CGG
Pro
>WENV180043547
LQAI01000563
269764
Thermodesulfobacteriota
GGC
Ala
>WENV180043631
LQAI01003616
269764
Thermodesulfobacteriota
GGC
Ala
>WENV180043599
LQAI01001838
256451
Thermodesulfobacteriota
CTT
Lys
>WENV180043600
LQAI01001838
256451
Thermodesulfobacteriota
CTT
Lys
>WENV180043580
LQAI01001159
351789
Thermodesulfobacteriota
GAC
Val
>WENV180043782
LQAI01019457
256448
Thermodesulfobacteriota
GTT
Asn
>WENV180043783
LQAI01019457
256448
Thermodesulfobacteriota
GTT
Asn
>WENV180043538
LQAI01000466
174404
Thermodesulfobacteriota
CCA
Trp
>WENV180043546
LQAI01000561
256449
Thermodesulfobacteriota
GTG
His
>WENV180043630
LQAI01003041
256452
Thermodesulfobacteriota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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