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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170660042
JXWS01106105
400568
Euryarchaeota
TGC
Ala
>WENV170660074
JXWS01129990
481139
Euryarchaeota
CCC
Gly
>WENV170659858
JXWS01011008
481143
Euryarchaeota
TCC
Gly
>WENV170660045
JXWS01108645
56409
Euryarchaeota
GAG
Leu
>WENV170660087
JXWS01139147
56409
Euryarchaeota
GAG
Leu
>WENV170659967
JXWS01062105
481142
Euryarchaeota
GTG
His
>WENV170659968
JXWS01062106
481142
Euryarchaeota
GTG
His
>WENV170660000
JXWS01077927
481142
Euryarchaeota
GTG
His
>WENV170659860
JXWS01012752
156151
Euryarchaeota
TTC
Glu
>WENV170660038
JXWS01104192
156151
Euryarchaeota
TTC
Glu
>WENV170659861
JXWS01012777
283684
Euryarchaeota
TTG
Gln
>WENV170660025
JXWS01094585
481134
Euryarchaeota
>WENV170660033
JXWS01098248
303568
Euryarchaeota
TTG
Gln
>WENV170659884
JXWS01024275
178890
Euryarchaeota
GAA
Phe
>WENV170659985
JXWS01071827
178890
Euryarchaeota
GAA
Phe
>WENV170660023
JXWS01093521
122246
Euryarchaeota
GGA
Ser
>WENV170659906
JXWS01030648
283531
Euryarchaeota
GTC
Asp
>WENV170659941
JXWS01050057
400569
Euryarchaeota
>WENV170659992
JXWS01073662
158933
Euryarchaeota
CAT
Met
>WENV170659989
JXWS01073495
283681
Euryarchaeota
CCG
Arg
>WENV170659854
JXWS01010353
224534
Euryarchaeota
GTA
Tyr
>WENV170659921
JXWS01037910
224534
Euryarchaeota
GTA
Tyr
>WENV170659958
JXWS01056567
56444
Euryarchaeota
TAA
Leu
>WENV170659990
JXWS01073605
283676
Euryarchaeota
TGG
Pro
>WENV170659869
JXWS01020117
302258
Euryarchaeota
GTC
Asp
>WENV170659870
JXWS01020117
302258
Euryarchaeota
GTC
Asp
>WENV170659940
JXWS01049049
302258
Euryarchaeota
GTC
Asp
>WENV170659949
JXWS01052865
56441
Euryarchaeota
TAG
Leu
>WENV170660021
JXWS01091371
283533
Euryarchaeota
TTG
Gln
>WENV170659934
JXWS01044956
331220
Euryarchaeota
TGG
Pro
>WENV170659971
JXWS01063201
481131
Euryarchaeota
TCC
Gly
>WENV170659840
JXWS01003122
178928
Euryarchaeota
GTA
Tyr
>WENV170660001
JXWS01079525
161141
Euryarchaeota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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