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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170680602
LFEF01002442
280873
Alphaproteobacteria
CCA
Trp
>WENV170680892
LFEF01031075
283023
Alphaproteobacteria
CGC
Ala
>WENV170680912
LFEF01033705
399001
Alphaproteobacteria
GAC
Val
>WENV170680819
LFEF01024589
293747
Alphaproteobacteria
CTT
Lys
>WENV170680958
LFEF01038893
299458
Alphaproteobacteria
TTT
Lys
>WENV170680761
LFEF01019472
176225
Alphaproteobacteria
TGG
Pro
>WENV170680732
LFEF01015738
290029
Alphaproteobacteria
TGT
Thr
>WENV170680600
LFEF01002442
117818
Alphaproteobacteria
GTA
Tyr
>WENV170680634
LFEF01005855
406803
Alphaproteobacteria
TTG
Gln
>WENV170681029
LFEF01044793
117815
Alphaproteobacteria
CAG
Leu
>WENV170680772
LFEF01020125
180177
Alphaproteobacteria
CCT
Arg
>WENV170680923
LFEF01034723
176240
Alphaproteobacteria
CAT
Met
>WENV170680630
LFEF01005648
176230
Alphaproteobacteria
CGG
Pro
>WENV170680622
LFEF01004026
400695
Alphaproteobacteria
TTC
Glu
>WENV170680887
LFEF01030099
30596
Alphaproteobacteria
GGA
Ser
>WENV170681031
LFEF01044822
179148
Alphaproteobacteria
GAT
Ile
>WENV170680799
LFEF01023257
298628
Alphaproteobacteria
CCA
Trp
>WENV170680777
LFEF01021149
20388
Alphaproteobacteria
GCT
Ser
>WENV170681011
LFEF01043119
13411
Alphaproteobacteria
GCT
Ser
>WENV170680584
LFEF01000152
192328
Alphaproteobacteria
ACG
Arg
>WENV170680952
LFEF01037958
480418
Alphaproteobacteria
GCA
Cys
>WENV170680754
LFEF01018267
176233
Alphaproteobacteria
>WENV170681030
LFEF01044822
281659
Alphaproteobacteria
TGC
Ala
>WENV170680942
LFEF01036808
29571
Alphaproteobacteria
CGA
Ser
>WENV170680775
LFEF01020937
29671
Alphaproteobacteria
TGA
Ser
>WENV170681026
LFEF01044631
156091
Alphaproteobacteria
GGG
Pro
>WENV170680678
LFEF01009444
400214
Alphaproteobacteria
>WENV170680701
LFEF01012010
118387
Alphaproteobacteria
CAA
Leu
>WENV170680714
LFEF01013432
178327
Alphaproteobacteria
GTG
His
>WENV170680955
LFEF01038172
178331
Alphaproteobacteria
CCG
Arg
>WENV170680828
LFEF01025247
283066
Alphaproteobacteria
CAT
Met
>WENV170680885
LFEF01029879
485713
Alphaproteobacteria
CTG
Gln
>WENV170680694
LFEF01011152
400249
Alphaproteobacteria
GCC
Gly
>WENV170681004
LFEF01041994
400190
Alphaproteobacteria
>WENV170680906
LFEF01033077
176234
Alphaproteobacteria
CCT
Arg
>WENV170681024
LFEF01044376
184444
Alphaproteobacteria
GTG
His
>WENV170680963
LFEF01039109
400250
Alphaproteobacteria
GAC
Val
>WENV170680889
LFEF01030368
118316
Alphaproteobacteria
CAA
Leu
>WENV170680749
LFEF01017797
400069
Alphaproteobacteria
CAC
Val
>WENV170680671
LFEF01008706
482561
Alphaproteobacteria
TCC
Gly
>WENV170681008
LFEF01042667
398980
Alphaproteobacteria
GAC
Val
>WENV170680626
LFEF01004837
177988
Alphaproteobacteria
ACG
Arg
>WENV170680764
LFEF01019484
282658
Alphaproteobacteria
CGT
Thr
>WENV170680964
LFEF01039200
290520
Alphaproteobacteria
TAC
Val
>WENV170680743
LFEF01016369
76550
Alphaproteobacteria
CAG
Leu
>WENV170680956
LFEF01038491
398994
Alphaproteobacteria
GTT
Asn
>WENV170680993
LFEF01040366
480392
Alphaproteobacteria
GCA
Cys
>WENV170680910
LFEF01033660
400274
Alphaproteobacteria
TTT
Lys
>WENV170680641
LFEF01006335
398986
Alphaproteobacteria
TAC
Val
>WENV170680778
LFEF01021149
290521
Alphaproteobacteria
GAA
Phe
>WENV170680989
LFEF01039879
178328
Alphaproteobacteria
TGG
Pro
>WENV170680689
LFEF01010618
480946
Alphaproteobacteria
TTG
Gln
>WENV170680829
LFEF01025447
13311
Alphaproteobacteria
GCT
Ser
>WENV170680890
LFEF01030955
296763
Alphaproteobacteria
CCA
Trp
>WENV170680704
LFEF01012466
289046
Alphaproteobacteria
TGC
Ala
>WENV170681007
LFEF01042533
398996
Alphaproteobacteria
GCC
Gly
>WENV170680619
LFEF01003806
29598
Alphaproteobacteria
GGA
Ser
>WENV170680718
LFEF01014120
290044
Alphaproteobacteria
CTT
Lys
>WENV170680763
LFEF01019472
399044
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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