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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170707238
LNAP01015834
300982
Betaproteobacteria
TTT
Lys
>WENV170707365
LNAP01018726
300982
Betaproteobacteria
TTT
Lys
>WENV170708078
LNAP01048597
300982
Betaproteobacteria
TTT
Lys
>WENV170708195
LNAP01057425
178431
Betaproteobacteria
GAT
Ile
>WENV170708426
LNAP01080416
178431
Betaproteobacteria
GAT
Ile
>WENV170708433
LNAP01081327
178431
Betaproteobacteria
GAT
Ile
>WENV170708468
LNAP01085326
178431
Betaproteobacteria
GAT
Ile
>WENV170708474
LNAP01085586
178431
Betaproteobacteria
GAT
Ile
>WENV170708084
LNAP01048981
212101
Betaproteobacteria
GAT
Ile
>WENV170706224
LNAP01001749
283192
Betaproteobacteria
TGT
Thr
>WENV170706703
LNAP01005745
283192
Betaproteobacteria
TGT
Thr
>WENV170707316
LNAP01017257
283192
Betaproteobacteria
TGT
Thr
>WENV170707996
LNAP01043246
283192
Betaproteobacteria
TGT
Thr
>WENV170706297
LNAP01001906
305239
Betaproteobacteria
TTT
Lys
>WENV170708555
LNAP01095484
305239
Betaproteobacteria
TTT
Lys
>WENV170707877
LNAP01037585
29649
Betaproteobacteria
CGA
Ser
>WENV170707960
LNAP01041811
29649
Betaproteobacteria
CGA
Ser
>WENV170708579
LNAP01098942
29649
Betaproteobacteria
CGA
Ser
>WENV170706346
LNAP01002279
284821
Betaproteobacteria
TTT
Lys
>WENV170706627
LNAP01004846
284821
Betaproteobacteria
TTT
Lys
>WENV170706834
LNAP01007403
284821
Betaproteobacteria
TTT
Lys
>WENV170707028
LNAP01011136
284821
Betaproteobacteria
TTT
Lys
>WENV170707111
LNAP01012882
284821
Betaproteobacteria
TTT
Lys
>WENV170707278
LNAP01016620
284821
Betaproteobacteria
TTT
Lys
>WENV170707396
LNAP01019356
284821
Betaproteobacteria
TTT
Lys
>WENV170707576
LNAP01025926
284821
Betaproteobacteria
TTT
Lys
>WENV170707793
LNAP01034304
284821
Betaproteobacteria
TTT
Lys
>WENV170708010
LNAP01043960
284821
Betaproteobacteria
TTT
Lys
>WENV170707945
LNAP01041156
127222
Betaproteobacteria
CAG
Leu
>WENV170707946
LNAP01041156
127222
Betaproteobacteria
CAG
Leu
>WENV170706421
LNAP01003073
73476
Betaproteobacteria
GTA
Tyr
>WENV170706419
LNAP01003043
284666
Betaproteobacteria
TAC
Val
>WENV170706505
LNAP01003684
284666
Betaproteobacteria
TAC
Val
>WENV170706927
LNAP01009090
284666
Betaproteobacteria
TAC
Val
>WENV170706994
LNAP01010562
400814
Betaproteobacteria
CAC
Val
>WENV170707694
LNAP01029815
401210
Betaproteobacteria
CCT
Arg
>WENV170707790
LNAP01034252
117923
Betaproteobacteria
CAG
Leu
>WENV170708211
LNAP01059084
117923
Betaproteobacteria
CAG
Leu
>WENV170706154
LNAP01001399
176193
Betaproteobacteria
TTG
Gln
>WENV170706930
LNAP01009134
281431
Betaproteobacteria
GTT
Asn
>WENV170707158
LNAP01013977
281431
Betaproteobacteria
GTT
Asn
>WENV170708132
LNAP01051781
281431
Betaproteobacteria
GTT
Asn
>WENV170708400
LNAP01078190
281431
Betaproteobacteria
GTT
Asn
>WENV170708665
LNAP01101418
281431
Betaproteobacteria
GTT
Asn
>WENV170705687
LNAP01000128
180112
Betaproteobacteria
TGG
Pro
>WENV170705815
LNAP01000379
283985
Betaproteobacteria
CTT
Lys
>WENV170706807
LNAP01007000
283985
Betaproteobacteria
CTT
Lys
>WENV170707164
LNAP01014082
283985
Betaproteobacteria
CTT
Lys
>WENV170708387
LNAP01076737
283985
Betaproteobacteria
CTT
Lys
>WENV170706898
LNAP01008542
283006
Betaproteobacteria
GCC
Gly
>WENV170707225
LNAP01015566
283006
Betaproteobacteria
GCC
Gly
>WENV170707558
LNAP01025364
283006
Betaproteobacteria
GCC
Gly
>WENV170708438
LNAP01082209
283006
Betaproteobacteria
GCC
Gly
>WENV170706420
LNAP01003066
56355
Betaproteobacteria
TGA
Ser
>WENV170706526
LNAP01003917
56355
Betaproteobacteria
TGA
Ser
>WENV170707037
LNAP01011257
56355
Betaproteobacteria
TGA
Ser
>WENV170708415
LNAP01079571
56355
Betaproteobacteria
TGA
Ser
>WENV170708462
LNAP01084187
117806
Betaproteobacteria
GTA
Tyr
>WENV170707957
LNAP01041664
480973
Betaproteobacteria
GCA
Cys
>WENV170705833
LNAP01000436
179863
Betaproteobacteria
TGG
Pro
>WENV170707068
LNAP01012147
179863
Betaproteobacteria
TGG
Pro
>WENV170708647
LNAP01100863
179863
Betaproteobacteria
TGG
Pro
>WENV170707468
LNAP01021928
192191
Betaproteobacteria
CAT
Met
>WENV170706624
LNAP01004820
483989
Betaproteobacteria
>WENV170707547
LNAP01025060
483989
Betaproteobacteria
>WENV170707669
LNAP01028943
483989
Betaproteobacteria
>WENV170708068
LNAP01047709
483989
Betaproteobacteria
>WENV170708319
LNAP01069416
483989
Betaproteobacteria
>WENV170705767
LNAP01000241
178430
Betaproteobacteria
TTG
Gln
>WENV170706381
LNAP01002658
178430
Betaproteobacteria
TTG
Gln
>WENV170706672
LNAP01005379
178430
Betaproteobacteria
TTG
Gln
>WENV170708289
LNAP01066107
178430
Betaproteobacteria
TTG
Gln
>WENV170707093
LNAP01012444
282942
Betaproteobacteria
CCG
Arg
>WENV170706501
LNAP01003633
20385
Betaproteobacteria
GGA
Ser
>WENV170708460
LNAP01084001
20385
Betaproteobacteria
GGA
Ser
>WENV170705660
LNAP01000084
118059
Betaproteobacteria
TAG
Leu
>WENV170706215
LNAP01001711
118059
Betaproteobacteria
TAG
Leu
>WENV170706258
LNAP01001801
118059
Betaproteobacteria
TAG
Leu
>WENV170706629
LNAP01004871
118059
Betaproteobacteria
TAG
Leu
>WENV170706987
LNAP01010420
118059
Betaproteobacteria
TAG
Leu
>WENV170707613
LNAP01027325
118059
Betaproteobacteria
TAG
Leu
>WENV170707831
LNAP01035763
118059
Betaproteobacteria
TAG
Leu
>WENV170708220
LNAP01060132
118059
Betaproteobacteria
TAG
Leu
>WENV170706351
LNAP01002327
400347
Betaproteobacteria
CAC
Val
>WENV170707660
LNAP01028784
400347
Betaproteobacteria
CAC
Val
>WENV170708322
LNAP01069778
400347
Betaproteobacteria
CAC
Val
>WENV170706959
LNAP01009774
73415
Betaproteobacteria
GTA
Tyr
>WENV170706632
LNAP01004930
282941
Betaproteobacteria
TGT
Thr
>WENV170706809
LNAP01007064
282941
Betaproteobacteria
TGT
Thr
>WENV170708035
LNAP01045339
282941
Betaproteobacteria
TGT
Thr
>WENV170706397
LNAP01002822
481266
Betaproteobacteria
GCA
Cys
>WENV170707359
LNAP01018606
120253
Betaproteobacteria
CAG
Leu
>WENV170707190
LNAP01014957
120253
Betaproteobacteria
CAG
Leu
>WENV170707589
LNAP01026284
400288
Betaproteobacteria
CCT
Arg
>WENV170708384
LNAP01076034
400288
Betaproteobacteria
CCT
Arg
>WENV170708538
LNAP01093431
400288
Betaproteobacteria
CCT
Arg
>WENV170706902
LNAP01008675
400244
Betaproteobacteria
CCT
Arg
>WENV170707896
LNAP01038287
400244
Betaproteobacteria
CCT
Arg
>WENV170708461
LNAP01084187
292271
Betaproteobacteria
TGT
Thr
>WENV170705925
LNAP01000645
292271
Betaproteobacteria
TGT
Thr
>WENV170705834
LNAP01000436
292271
Betaproteobacteria
TGT
Thr
>WENV170707222
LNAP01015508
177009
Betaproteobacteria
GGG
Pro
>WENV170706934
LNAP01009204
118799
Betaproteobacteria
GAG
Leu
>WENV170707213
LNAP01015242
342564
Betaproteobacteria
CGC
Ala
>WENV170706377
LNAP01002625
224943
Betaproteobacteria
TTG
Gln
>WENV170706495
LNAP01003579
224943
Betaproteobacteria
TTG
Gln
>WENV170707113
LNAP01012902
118157
Betaproteobacteria
GAG
Leu
>WENV170705784
LNAP01000292
195882
Betaproteobacteria
TTG
Gln
>WENV170707579
LNAP01026199
187036
Betaproteobacteria
CAT
Met
>WENV170707927
LNAP01040184
187036
Betaproteobacteria
CAT
Met
>WENV170708283
LNAP01065316
187036
Betaproteobacteria
CAT
Met
>WENV170708463
LNAP01084187
283554
Betaproteobacteria
TCC
Gly
>WENV170707184
LNAP01014542
307931
Betaproteobacteria
TTC
Glu
>WENV170706973
LNAP01010123
60914
Betaproteobacteria
TGA
Ser
>WENV170707041
LNAP01011321
60914
Betaproteobacteria
TGA
Ser
>WENV170708013
LNAP01044055
60914
Betaproteobacteria
TGA
Ser
>WENV170708524
LNAP01091038
414048
Betaproteobacteria
GGT
Thr
>WENV170705844
LNAP01000471
283445
Betaproteobacteria
GTT
Asn
>WENV170706046
LNAP01000973
283445
Betaproteobacteria
GTT
Asn
>WENV170707033
LNAP01011242
283445
Betaproteobacteria
GTT
Asn
>WENV170707106
LNAP01012782
283445
Betaproteobacteria
GTT
Asn
>WENV170707239
LNAP01015859
283445
Betaproteobacteria
GTT
Asn
>WENV170707621
LNAP01027646
283445
Betaproteobacteria
GTT
Asn
>WENV170707639
LNAP01028091
283445
Betaproteobacteria
GTT
Asn
>WENV170708272
LNAP01064788
283445
Betaproteobacteria
GTT
Asn
>WENV170706884
LNAP01008260
282943
Betaproteobacteria
CTT
Lys
>WENV170708620
LNAP01099765
282943
Betaproteobacteria
CTT
Lys
>WENV170706795
LNAP01006792
178289
Betaproteobacteria
TTG
Gln
>WENV170707716
LNAP01030945
340615
Betaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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