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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183552961
OOBK01000095
24650
Bacillota
TAA
Leu
>WENV183553415
OOBK01004149
361659
Bacillota
GCC
Gly
>WENV183553596
OOBK01017270
237957
Bacillota
GTT
Asn
>WENV183553466
OOBK01005424
16842
Bacillota
CGA
Ser
>WENV183553112
OOBK01000582
309417
Bacillota
GGC
Ala
>WENV183553265
OOBK01001642
309417
Bacillota
GGC
Ala
>WENV183553316
OOBK01002154
309417
Bacillota
GGC
Ala
>WENV183553066
OOBK01000358
240192
Bacillota
CTG
Gln
>WENV183553268
OOBK01001681
37213
Bacillota
TGA
Ser
>WENV183553324
OOBK01002267
144612
Bacillota
TCT
Arg
>WENV183553028
OOBK01000250
144612
Bacillota
TCT
Arg
>WENV183553281
OOBK01001760
154063
Bacillota
CGG
Pro
>WENV183553365
OOBK01003151
267649
Bacillota
TAC
Val
>WENV183553238
OOBK01001432
161950
Bacillota
CGG
Pro
>WENV183553500
OOBK01007818
235287
Bacillota
TTT
Lys
>WENV183553352
OOBK01002955
235098
Bacillota
GAC
Val
>WENV183553333
OOBK01002457
235098
Bacillota
GAC
Val
>WENV183553190
OOBK01001062
235098
Bacillota
GAC
Val
>WENV183553275
OOBK01001727
338152
Bacillota
TTC
Glu
>WENV183553256
OOBK01001558
44854
Bacillota
TGA
Ser
>WENV183553078
OOBK01000387
44854
Bacillota
TGA
Ser
>WENV183553049
OOBK01000305
44854
Bacillota
TGA
Ser
>WENV183553266
OOBK01001656
235154
Bacillota
GTT
Asn
>WENV183553030
OOBK01000254
37071
Bacillota
TGA
Ser
>WENV183553329
OOBK01002354
338147
Bacillota
CTC
Glu
>WENV183553004
OOBK01000204
338147
Bacillota
CTC
Glu
>WENV183552926
OOBK01000041
338147
Bacillota
CTC
Glu
>WENV183553414
OOBK01004149
114359
Bacillota
TAG
Leu
>WENV183553405
OOBK01004149
235294
Bacillota
TGC
Ala
>WENV183553230
OOBK01001432
237265
Bacillota
TAC
Val
>WENV183553067
OOBK01000358
313331
Bacillota
CTC
Glu
>WENV183553111
OOBK01000566
302152
Bacillota
CTT
Lys
>WENV183553497
OOBK01007818
116350
Bacillota
TAG
Leu
>WENV183552981
OOBK01000144
429429
Bacillota
CCA
Trp
>WENV183553140
OOBK01000733
247786
Bacillota
CGT
Thr
>WENV183553408
OOBK01004149
379268
Bacillota
TTC
Glu
>WENV183553019
OOBK01000229
313454
Bacillota
GAA
Phe
>WENV183553580
OOBK01014091
44859
Bacillota
AAG
Leu
>WENV183553446
OOBK01004699
16834
Bacillota
GCT
Ser
>WENV183553188
OOBK01001011
11034
Bacillota
GGA
Ser
>WENV183553499
OOBK01007818
235290
Bacillota
TTG
Gln
>WENV183553024
OOBK01000239
247747
Bacillota
GGT
Thr
>WENV183553236
OOBK01001432
199192
Bacillota
ACG
Arg
>WENV183553247
OOBK01001521
149041
Bacillota
GTC
Asp
>WENV183553503
OOBK01007818
144766
Bacillota
CAT
Met
>WENV183553440
OOBK01004492
245298
Bacillota
CGG
Pro
>WENV183553197
OOBK01001121
245298
Bacillota
CGG
Pro
>WENV183553402
OOBK01004045
340131
Bacillota
GTT
Asn
>WENV183553332
OOBK01002438
147741
Bacillota
TCT
Arg
>WENV183553153
OOBK01000802
155089
Bacillota
CAT
Met
>WENV183553139
OOBK01000733
390525
Bacillota
TTC
Glu
>WENV183553143
OOBK01000733
237266
Bacillota
GTG
His
>WENV183553626
OOBK01022383
152492
Bacillota
GGG
Pro
>WENV183553677
OOBK01041571
147135
Bacillota
ACG
Arg
>WENV183553231
OOBK01001432
240190
Bacillota
TTT
Lys
>WENV183553053
OOBK01000318
144610
Bacillota
GTG
His
>WENV183553439
OOBK01004492
411547
Bacillota
CTG
Gln
>WENV183553196
OOBK01001121
411547
Bacillota
CTG
Gln
>WENV183553257
OOBK01001558
4624
Bacillota
GCT
Ser
>WENV183553079
OOBK01000387
4624
Bacillota
GCT
Ser
>WENV183553050
OOBK01000305
4624
Bacillota
GCT
Ser
>WENV183553672
OOBK01038642
412387
Bacillota
GCA
Cys
>WENV183553409
OOBK01004149
411584
Bacillota
TCC
Gly
>WENV183553410
OOBK01004149
313104
Bacillota
TAC
Val
>WENV183553348
OOBK01002792
235095
Bacillota
GGT
Thr
>WENV183553301
OOBK01001990
235095
Bacillota
GGT
Thr
>WENV183553692
OOBK01047839
194150
Bacillota
TGG
Pro
>WENV183553245
OOBK01001521
239832
Bacillota
TGT
Thr
>WENV183553689
OOBK01046108
250349
Bacillota
GAA
Phe
>WENV183553534
OOBK01009601
411549
Bacillota
TTG
Gln
>WENV183553341
OOBK01002610
411549
Bacillota
TTG
Gln
>WENV183553280
OOBK01001751
411549
Bacillota
TTG
Gln
>WENV183553101
OOBK01000520
411549
Bacillota
TTG
Gln
>WENV183553164
OOBK01000834
235142
Bacillota
CTT
Lys
>WENV183553605
OOBK01019044
59296
Bacillota
AAG
Leu
>WENV183553141
OOBK01000733
85288
Bacillota
GTA
Tyr
>WENV183553421
OOBK01004190
148188
Bacillota
CCG
Arg
>WENV183553380
OOBK01003401
148188
Bacillota
CCG
Arg
>WENV183553295
OOBK01001957
148188
Bacillota
CCG
Arg
>WENV183553123
OOBK01000642
148188
Bacillota
CCG
Arg
>WENV183553572
OOBK01013910
298639
Bacillota
GTT
Asn
>WENV183553221
OOBK01001383
80612
Bacillota
GTA
Tyr
>WENV183553192
OOBK01001087
80612
Bacillota
GTA
Tyr
>WENV183552986
OOBK01000166
256380
Bacillota
>WENV183553089
OOBK01000453
235127
Bacillota
TTT
Lys
>WENV183553688
OOBK01046108
235197
Bacillota
GTC
Asp
>WENV183553451
OOBK01004865
147674
Bacillota
TCT
Arg
>WENV183553509
OOBK01008144
241432
Bacillota
TGT
Thr
>WENV183553398
OOBK01004045
241432
Bacillota
TGT
Thr
>WENV183553416
OOBK01004149
411739
Bacillota
TCC
Gly
>WENV183553383
OOBK01003588
235124
Bacillota
TGG
Pro
>WENV183553318
OOBK01002178
235124
Bacillota
TGG
Pro
>WENV183553312
OOBK01002105
235124
Bacillota
TGG
Pro
>WENV183553505
OOBK01007818
163753
Bacillota
TGG
Pro
>WENV183553417
OOBK01004149
201667
Bacillota
TCT
Arg
>WENV183553289
OOBK01001898
338129
Bacillota
TGT
Thr
>WENV183553220
OOBK01001383
338129
Bacillota
TGT
Thr
>WENV183553419
OOBK01004149
279635
Bacillota
GTG
His
>WENV183553229
OOBK01001432
279755
Bacillota
GTC
Asp
>WENV183553183
OOBK01000968
144583
Bacillota
ACG
Arg
>WENV183553039
OOBK01000268
144583
Bacillota
ACG
Arg
>WENV183553654
OOBK01028526
247734
Bacillota
TGC
Ala
>WENV183553658
OOBK01032105
419877
Bacillota
TCC
Gly
>WENV183553116
OOBK01000610
235171
Bacillota
CCA
Trp
>WENV183553102
OOBK01000524
238974
Bacillota
GAA
Phe
>WENV183553126
OOBK01000672
144621
Bacillota
GTT
Asn
>WENV183553264
OOBK01001616
58712
Bacillota
CAG
Leu
>WENV183553149
OOBK01000780
58712
Bacillota
CAG
Leu
>WENV183553110
OOBK01000565
58712
Bacillota
CAG
Leu
>WENV183553498
OOBK01007818
144762
Bacillota
TCT
Arg
>WENV183553132
OOBK01000707
245296
Bacillota
CCC
Gly
>WENV183552912
OOBK01000026
245296
Bacillota
CCC
Gly
>WENV183553233
OOBK01001432
247849
Bacillota
TGT
Thr
>WENV183553536
OOBK01009868
273029
Bacillota
TGT
Thr
>WENV183553138
OOBK01000733
16595
Bacillota
GCT
Ser
>WENV183553675
OOBK01041571
344240
Bacillota
GCC
Gly
>WENV183553539
OOBK01009868
281472
Bacillota
GGT
Thr
>WENV183553674
OOBK01041571
196632
Bacillota
GTC
Asp
>WENV183553495
OOBK01007800
299139
Bacillota
TGC
Ala
>WENV183553299
OOBK01001980
144594
Bacillota
CAC
Val
>WENV183553200
OOBK01001138
144594
Bacillota
CAC
Val
>WENV183552879
OOBK01000006
95563
Bacillota
GTA
Tyr
>WENV183553088
OOBK01000453
272488
Bacillota
GAA
Phe
>WENV183553130
OOBK01000700
114075
Bacillota
TAG
Leu
>WENV183553142
OOBK01000733
412118
Bacillota
>WENV183553144
OOBK01000733
45160
Bacillota
CAA
Leu
>WENV183553569
OOBK01013518
338131
Bacillota
GCC
Gly
>WENV183553478
OOBK01006583
338131
Bacillota
GCC
Gly
>WENV183553071
OOBK01000369
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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