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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183596195
OODE01000003
37269
Bacillota
TGA
Ser
>WENV183596193
OODE01000003
287000
Bacillota
GTT
Asn
>WENV183596196
OODE01000004
152492
Bacillota
GGG
Pro
>WENV183596221
OODE01000016
147684
Bacillota
ACG
Arg
>WENV183596292
OODE01000076
144672
Bacillota
TCT
Arg
>WENV183596311
OODE01000101
338131
Bacillota
GCC
Gly
>WENV183596340
OODE01000137
344240
Bacillota
GCC
Gly
>WENV183596361
OODE01000168
235127
Bacillota
TTT
Lys
>WENV183596358
OODE01000168
147674
Bacillota
TCT
Arg
>WENV183596413
OODE01000279
243098
Bacillota
GGT
Thr
>WENV183596426
OODE01000294
340802
Bacillota
TTG
Gln
>WENV183596425
OODE01000294
156937
Bacillota
GTG
His
>WENV183596449
OODE01000326
152492
Bacillota
GGG
Pro
>WENV183596454
OODE01000338
18852
Bacillota
GCT
Ser
>WENV183596456
OODE01000344
185292
Bacillota
ACG
Arg
>WENV183596468
OODE01000388
149041
Bacillota
GTC
Asp
>WENV183596466
OODE01000388
239832
Bacillota
TGT
Thr
>WENV183596486
OODE01000426
196632
Bacillota
GTC
Asp
>WENV183596487
OODE01000426
245344
Bacillota
GAA
Phe
>WENV183596495
OODE01000454
267649
Bacillota
TAC
Val
>WENV183596497
OODE01000454
267649
Bacillota
TAC
Val
>WENV183596506
OODE01000474
24650
Bacillota
TAA
Leu
>WENV183596511
OODE01000513
419639
Bacillota
GCA
Cys
>WENV183596562
OODE01000826
238945
Bacillota
GCC
Gly
>WENV183596592
OODE01001062
147684
Bacillota
ACG
Arg
>WENV183596619
OODE01001209
37269
Bacillota
TGA
Ser
>WENV183596638
OODE01001364
238974
Bacillota
GAA
Phe
>WENV183596643
OODE01001402
238945
Bacillota
GCC
Gly
>WENV183596668
OODE01001631
235154
Bacillota
GTT
Asn
>WENV183596670
OODE01001631
429443
Bacillota
GCA
Cys
>WENV183596709
OODE01002129
338149
Bacillota
CTC
Glu
>WENV183596710
OODE01002129
144621
Bacillota
GTT
Asn
>WENV183596718
OODE01002340
144672
Bacillota
TCT
Arg
>WENV183596729
OODE01002446
162445
Bacillota
CAT
Met
>WENV183596736
OODE01002499
272992
Bacillota
CTT
Lys
>WENV183596760
OODE01003063
267556
Bacillota
TAC
Val
>WENV183596763
OODE01003163
18852
Bacillota
GCT
Ser
>WENV183596769
OODE01003268
144594
Bacillota
CAC
Val
>WENV183596774
OODE01003383
429429
Bacillota
CCA
Trp
>WENV183596802
OODE01003544
148188
Bacillota
CCG
Arg
>WENV183596803
OODE01003550
44854
Bacillota
TGA
Ser
>WENV183596804
OODE01003550
4624
Bacillota
GCT
Ser
>WENV183596808
OODE01003826
412387
Bacillota
GCA
Cys
>WENV183596811
OODE01003881
277200
Bacillota
GGC
Ala
>WENV183596841
OODE01004496
272488
Bacillota
GAA
Phe
>WENV183596843
OODE01004533
338129
Bacillota
TGT
Thr
>WENV183596848
OODE01004592
267649
Bacillota
TAC
Val
>WENV183596856
OODE01004687
411547
Bacillota
CTG
Gln
>WENV183596863
OODE01004950
144612
Bacillota
TCT
Arg
>WENV183596885
OODE01005663
256380
Bacillota
>WENV183596948
OODE01009510
235171
Bacillota
CCA
Trp
>WENV183596957
OODE01010202
411584
Bacillota
TCC
Gly
>WENV183596968
OODE01011288
411549
Bacillota
TTG
Gln
>WENV183596971
OODE01011301
338143
Bacillota
CTC
Glu
>WENV183596973
OODE01011321
144583
Bacillota
ACG
Arg
>WENV183596993
OODE01013322
338129
Bacillota
TGT
Thr
>WENV183597001
OODE01015322
11034
Bacillota
GGA
Ser
>WENV183597004
OODE01016472
44859
Bacillota
AAG
Leu
>WENV183597018
OODE01018111
235079
Bacillota
GAA
Phe
>WENV183597024
OODE01019575
235150
Bacillota
TGC
Ala
>WENV183597027
OODE01021336
245296
Bacillota
CCC
Gly
>WENV183597029
OODE01021466
344183
Bacillota
CTG
Gln
>WENV183597035
OODE01021893
341763
Bacillota
CTC
Glu
>WENV183597037
OODE01022535
338129
Bacillota
TGT
Thr
>WENV183597040
OODE01023161
235124
Bacillota
TGG
Pro
>WENV183597051
OODE01024530
144763
Bacillota
TGG
Pro
>WENV183597049
OODE01024530
144766
Bacillota
CAT
Met
>WENV183597052
OODE01024530
144767
Bacillota
GTG
His
>WENV183597056
OODE01026261
338147
Bacillota
CTC
Glu
>WENV183597059
OODE01026686
338128
Bacillota
TTC
Glu
>WENV183597066
OODE01027527
154063
Bacillota
CGG
Pro
>WENV183597087
OODE01031868
356488
Bacillota
TGT
Thr
>WENV183597090
OODE01031868
338208
Bacillota
>WENV183597089
OODE01031868
116350
Bacillota
TAG
Leu
>WENV183597092
OODE01031868
235290
Bacillota
TTG
Gln
>WENV183597086
OODE01031868
235289
Bacillota
GTT
Asn
>WENV183597091
OODE01031868
144762
Bacillota
TCT
Arg
>WENV183597094
OODE01032333
338550
Bacillota
>WENV183597107
OODE01037888
246023
Bacillota
TGC
Ala
>WENV183597122
OODE01045526
144577
Bacillota
GAT
Ile
>WENV183597121
OODE01045526
235087
Bacillota
TGC
Ala
>WENV183597124
OODE01046016
413152
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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