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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
162 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183605574
OODM01008669
24650
Bacillota
TAA
Leu
>WENV183605075
OODM01000274
196621
Bacillota
GTC
Asp
>WENV183605149
OODM01000454
196621
Bacillota
GTC
Asp
>WENV183605312
OODM01001128
196621
Bacillota
GTC
Asp
>WENV183605428
OODM01002822
196621
Bacillota
GTC
Asp
>WENV183605694
OODM01031520
361659
Bacillota
GCC
Gly
>WENV183605045
OODM01000238
144612
Bacillota
TCT
Arg
>WENV183605304
OODM01001074
144612
Bacillota
TCT
Arg
>WENV183604963
OODM01000126
267649
Bacillota
TAC
Val
>WENV183605436
OODM01003041
267649
Bacillota
TAC
Val
>WENV183605536
OODM01006202
267649
Bacillota
TAC
Val
>WENV183605248
OODM01000837
235098
Bacillota
GAC
Val
>WENV183605269
OODM01000873
235098
Bacillota
GAC
Val
>WENV183605359
OODM01001811
235098
Bacillota
GAC
Val
>WENV183605388
OODM01002086
235098
Bacillota
GAC
Val
>WENV183605443
OODM01003289
235098
Bacillota
GAC
Val
>WENV183605680
OODM01031198
338152
Bacillota
TTC
Glu
>WENV183605550
OODM01006808
338152
Bacillota
TTC
Glu
>WENV183605213
OODM01000621
340263
Bacillota
TTC
Glu
>WENV183605048
OODM01000241
340263
Bacillota
TTC
Glu
>WENV183605326
OODM01001331
148239
Bacillota
TCT
Arg
>WENV183605087
OODM01000288
44854
Bacillota
TGA
Ser
>WENV183605554
OODM01007009
235154
Bacillota
GTT
Asn
>WENV183605518
OODM01005210
235154
Bacillota
GTT
Asn
>WENV183605329
OODM01001399
241441
Bacillota
GCC
Gly
>WENV183605131
OODM01000420
241441
Bacillota
GCC
Gly
>WENV183605206
OODM01000621
148348
Bacillota
GTC
Asp
>WENV183605050
OODM01000241
148348
Bacillota
GTC
Asp
>WENV183605520
OODM01005210
429443
Bacillota
GCA
Cys
>WENV183605495
OODM01004498
246023
Bacillota
TGC
Ala
>WENV183604834
OODM01000025
59312
Bacillota
CAG
Leu
>WENV183605236
OODM01000763
239080
Bacillota
CTG
Gln
>WENV183605671
OODM01027262
97943
Bacillota
GTA
Tyr
>WENV183605649
OODM01022391
235150
Bacillota
TGC
Ala
>WENV183605639
OODM01020375
235150
Bacillota
TGC
Ala
>WENV183605636
OODM01019416
235150
Bacillota
TGC
Ala
>WENV183605533
OODM01006056
235150
Bacillota
TGC
Ala
>WENV183605693
OODM01031520
114359
Bacillota
TAG
Leu
>WENV183605567
OODM01008209
235137
Bacillota
TGC
Ala
>WENV183605530
OODM01006010
235294
Bacillota
TGC
Ala
>WENV183605688
OODM01031326
340802
Bacillota
TTG
Gln
>WENV183605590
OODM01009931
341763
Bacillota
CTC
Glu
>WENV183605683
OODM01031198
144668
Bacillota
GTC
Asp
>WENV183605572
OODM01008669
144668
Bacillota
GTC
Asp
>WENV183605457
OODM01003444
429429
Bacillota
CCA
Trp
>WENV183605396
OODM01002170
429429
Bacillota
CCA
Trp
>WENV183604827
OODM01000021
429429
Bacillota
CCA
Trp
>WENV183605667
OODM01027262
186380
Bacillota
GTC
Asp
>WENV183605023
OODM01000203
11034
Bacillota
GGA
Ser
>WENV183604984
OODM01000144
11034
Bacillota
GGA
Ser
>WENV183605207
OODM01000621
239076
Bacillota
GAA
Phe
>WENV183605051
OODM01000241
239076
Bacillota
GAA
Phe
>WENV183605674
OODM01027878
247057
Bacillota
TGC
Ala
>WENV183604863
OODM01000046
235697
Bacillota
GTT
Asn
>WENV183605542
OODM01006405
235079
Bacillota
GAA
Phe
>WENV183605310
OODM01001128
235079
Bacillota
GAA
Phe
>WENV183605287
OODM01000998
235079
Bacillota
GAA
Phe
>WENV183605080
OODM01000281
235079
Bacillota
GAA
Phe
>WENV183604862
OODM01000046
296878
Bacillota
GTT
Asn
>WENV183605483
OODM01004233
295714
Bacillota
GCC
Gly
>WENV183605424
OODM01002637
295714
Bacillota
GCC
Gly
>WENV183605400
OODM01002170
295714
Bacillota
GCC
Gly
>WENV183605398
OODM01002170
295714
Bacillota
GCC
Gly
>WENV183605214
OODM01000634
340265
Bacillota
GCC
Gly
>WENV183605187
OODM01000542
340265
Bacillota
GCC
Gly
>WENV183605186
OODM01000542
340265
Bacillota
GCC
Gly
>WENV183605577
OODM01008696
149041
Bacillota
GTC
Asp
>WENV183605467
OODM01003603
338149
Bacillota
CTC
Glu
>WENV183605459
OODM01003470
338149
Bacillota
CTC
Glu
>WENV183605004
OODM01000167
338149
Bacillota
CTC
Glu
>WENV183604913
OODM01000086
338149
Bacillota
CTC
Glu
>WENV183605055
OODM01000242
245298
Bacillota
CGG
Pro
>WENV183604942
OODM01000109
245298
Bacillota
CGG
Pro
>WENV183605267
OODM01000868
37269
Bacillota
TGA
Ser
>WENV183605246
OODM01000834
37269
Bacillota
TGA
Ser
>WENV183605336
OODM01001488
413152
Bacillota
TCC
Gly
>WENV183605193
OODM01000558
162445
Bacillota
CAT
Met
>WENV183605494
OODM01004498
201704
Bacillota
GAT
Ile
>WENV183605194
OODM01000572
152492
Bacillota
GGG
Pro
>WENV183605659
OODM01024637
144599
Bacillota
GTC
Asp
>WENV183604872
OODM01000052
100326
Bacillota
GTA
Tyr
>WENV183605687
OODM01031326
144610
Bacillota
GTG
His
>WENV183605350
OODM01001591
144610
Bacillota
GTG
His
>WENV183604900
OODM01000076
144610
Bacillota
GTG
His
>WENV183605472
OODM01003757
411547
Bacillota
CTG
Gln
>WENV183605283
OODM01000957
411547
Bacillota
CTG
Gln
>WENV183605104
OODM01000326
411547
Bacillota
CTG
Gln
>WENV183605054
OODM01000242
411547
Bacillota
CTG
Gln
>WENV183604941
OODM01000109
411547
Bacillota
CTG
Gln
>WENV183605334
OODM01001474
147684
Bacillota
ACG
Arg
>WENV183605088
OODM01000288
4624
Bacillota
GCT
Ser
>WENV183605669
OODM01027262
263765
Bacillota
TAC
Val
>WENV183605549
OODM01006645
412387
Bacillota
GCA
Cys
>WENV183605429
OODM01002822
235095
Bacillota
GGT
Thr
>WENV183605190
OODM01000552
235095
Bacillota
GGT
Thr
>WENV183605150
OODM01000454
235095
Bacillota
GGT
Thr
>WENV183605076
OODM01000274
235095
Bacillota
GGT
Thr
>WENV183605072
OODM01000274
235095
Bacillota
GGT
Thr
>WENV183605638
OODM01020046
198159
Bacillota
CAT
Met
>WENV183605137
OODM01000423
419639
Bacillota
GCA
Cys
>WENV183605052
OODM01000241
239079
Bacillota
TAC
Val
>WENV183605049
OODM01000241
239079
Bacillota
TAC
Val
>WENV183605510
OODM01004827
411549
Bacillota
TTG
Gln
>WENV183605167
OODM01000496
411549
Bacillota
TTG
Gln
>WENV183604940
OODM01000109
411549
Bacillota
TTG
Gln
>WENV183605599
OODM01011968
148188
Bacillota
CCG
Arg
>WENV183605410
OODM01002349
148188
Bacillota
CCG
Arg
>WENV183604973
OODM01000132
148188
Bacillota
CCG
Arg
>WENV183605469
OODM01003613
80612
Bacillota
GTA
Tyr
>WENV183605315
OODM01001128
80612
Bacillota
GTA
Tyr
>WENV183605375
OODM01001961
235127
Bacillota
TTT
Lys
>WENV183605372
OODM01001961
147674
Bacillota
TCT
Arg
>WENV183605631
OODM01019254
241432
Bacillota
TGT
Thr
>WENV183605695
OODM01031520
411739
Bacillota
TCC
Gly
>WENV183605344
OODM01001544
235124
Bacillota
TGG
Pro
>WENV183605022
OODM01000202
235124
Bacillota
TGG
Pro
>WENV183604847
OODM01000035
235124
Bacillota
TGG
Pro
>WENV183605692
OODM01031520
237963
Bacillota
TTT
Lys
>WENV183604921
OODM01000095
338129
Bacillota
TGT
Thr
>WENV183604846
OODM01000034
338129
Bacillota
TGT
Thr
>WENV183605690
OODM01031520
279635
Bacillota
GTG
His
>WENV183605361
OODM01001840
144583
Bacillota
ACG
Arg
>WENV183605234
OODM01000749
144583
Bacillota
ACG
Arg
>WENV183605074
OODM01000274
235171
Bacillota
CCA
Trp
>WENV183605568
OODM01008263
238974
Bacillota
GAA
Phe
>WENV183605225
OODM01000709
238974
Bacillota
GAA
Phe
>WENV183605159
OODM01000483
238974
Bacillota
GAA
Phe
>WENV183605460
OODM01003470
144621
Bacillota
GTT
Asn
>WENV183605421
OODM01002627
144621
Bacillota
GTT
Asn
>WENV183605227
OODM01000728
144621
Bacillota
GTT
Asn
>WENV183605093
OODM01000309
144621
Bacillota
GTT
Asn
>WENV183605005
OODM01000167
144621
Bacillota
GTT
Asn
>WENV183604914
OODM01000086
144621
Bacillota
GTT
Asn
>WENV183605394
OODM01002162
277200
Bacillota
GGC
Ala
>WENV183605668
OODM01027262
353527
Bacillota
TTC
Glu
>WENV183605610
OODM01013124
243098
Bacillota
GGT
Thr
>WENV183605019
OODM01000197
58712
Bacillota
CAG
Leu
>WENV183604983
OODM01000143
58712
Bacillota
CAG
Leu
>WENV183604943
OODM01000109
58712
Bacillota
CAG
Leu
>WENV183604877
OODM01000054
58712
Bacillota
CAG
Leu
>WENV183605222
OODM01000681
58712
Bacillota
CAG
Leu
>WENV183605387
OODM01002070
245296
Bacillota
CCC
Gly
>WENV183605126
OODM01000411
245296
Bacillota
CCC
Gly
>WENV183604897
OODM01000070
245296
Bacillota
CCC
Gly
>WENV183605468
OODM01003603
272992
Bacillota
CTT
Lys
>WENV183605245
OODM01000819
272992
Bacillota
CTT
Lys
>WENV183605047
OODM01000241
239078
Bacillota
TTT
Lys
>WENV183605136
OODM01000423
344240
Bacillota
GCC
Gly
>WENV183605120
OODM01000387
344240
Bacillota
GCC
Gly
>WENV183605031
OODM01000215
344240
Bacillota
GCC
Gly
>WENV183605232
OODM01000736
196632
Bacillota
GTC
Asp
>WENV183605134
OODM01000423
196632
Bacillota
GTC
Asp
>WENV183605119
OODM01000387
196632
Bacillota
GTC
Asp
>WENV183605244
OODM01000816
144594
Bacillota
CAC
Val
>WENV183605191
OODM01000552
144594
Bacillota
CAC
Val
>WENV183605174
OODM01000516
414486
Bacillota
CCC
Gly
>WENV183604903
OODM01000076
114075
Bacillota
TAG
Leu
>WENV183605430
OODM01002865
292012
Bacillota
TGC
Ala
>WENV183605064
OODM01000257
338128
Bacillota
TTC
Glu
>WENV183604975
OODM01000132
338128
Bacillota
TTC
Glu
>WENV183605233
OODM01000736
245344
Bacillota
GAA
Phe
>WENV183605135
OODM01000423
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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