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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
105 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183606997
OODO01000689
24650
Bacillota
TAA
Leu
>WENV183607220
OODO01002203
196621
Bacillota
GTC
Asp
>WENV183607603
OODO01019257
155958
Bacillota
GAT
Ile
>WENV183606914
OODO01000353
144612
Bacillota
TCT
Arg
>WENV183607044
OODO01000887
144612
Bacillota
TCT
Arg
>WENV183607069
OODO01000947
144612
Bacillota
TCT
Arg
>WENV183607228
OODO01002271
144612
Bacillota
TCT
Arg
>WENV183607241
OODO01002511
144612
Bacillota
TCT
Arg
>WENV183607329
OODO01004154
144612
Bacillota
TCT
Arg
>WENV183606790
OODO01000103
267649
Bacillota
TAC
Val
>WENV183606726
OODO01000022
235287
Bacillota
TTT
Lys
>WENV183607135
OODO01001327
235098
Bacillota
GAC
Val
>WENV183607048
OODO01000914
235098
Bacillota
GAC
Val
>WENV183606823
OODO01000153
338152
Bacillota
TTC
Glu
>WENV183607205
OODO01002110
148239
Bacillota
TCT
Arg
>WENV183607133
OODO01001327
44854
Bacillota
TGA
Ser
>WENV183607008
OODO01000739
44854
Bacillota
TGA
Ser
>WENV183607681
OODO01033373
235154
Bacillota
GTT
Asn
>WENV183606860
OODO01000224
37071
Bacillota
TGA
Ser
>WENV183607410
OODO01006574
302150
Bacillota
TAC
Val
>WENV183607354
OODO01004566
59312
Bacillota
CAG
Leu
>WENV183607380
OODO01005337
338147
Bacillota
CTC
Glu
>WENV183607143
OODO01001389
338147
Bacillota
CTC
Glu
>WENV183607026
OODO01000777
338147
Bacillota
CTC
Glu
>WENV183606964
OODO01000542
338147
Bacillota
CTC
Glu
>WENV183606936
OODO01000418
338147
Bacillota
CTC
Glu
>WENV183607626
OODO01023010
235150
Bacillota
TGC
Ala
>WENV183607392
OODO01005889
235294
Bacillota
TGC
Ala
>WENV183606723
OODO01000022
338208
Bacillota
>WENV183606722
OODO01000022
116350
Bacillota
TAG
Leu
>WENV183606957
OODO01000516
429429
Bacillota
CCA
Trp
>WENV183607353
OODO01004566
44859
Bacillota
AAG
Leu
>WENV183607345
OODO01004437
11034
Bacillota
GGA
Ser
>WENV183607142
OODO01001388
11034
Bacillota
GGA
Ser
>WENV183606725
OODO01000022
235290
Bacillota
TTG
Gln
>WENV183607445
OODO01007630
114284
Bacillota
CAA
Leu
>WENV183606879
OODO01000260
274189
Bacillota
TGT
Thr
>WENV183607137
OODO01001341
235079
Bacillota
GAA
Phe
>WENV183607703
OODO01037632
162028
Bacillota
ACG
Arg
>WENV183607402
OODO01006185
338149
Bacillota
CTC
Glu
>WENV183607350
OODO01004526
338149
Bacillota
CTC
Glu
>WENV183606760
OODO01000055
271471
Bacillota
GCC
Gly
>WENV183607031
OODO01000809
245298
Bacillota
CGG
Pro
>WENV183606720
OODO01000022
380750
Bacillota
TGT
Thr
>WENV183607144
OODO01001391
37269
Bacillota
TGA
Ser
>WENV183606822
OODO01000153
287000
Bacillota
GTT
Asn
>WENV183607538
OODO01012672
162445
Bacillota
CAT
Met
>WENV183607772
OODO01060826
344320
Bacillota
GTT
Asn
>WENV183607731
OODO01047874
153911
Bacillota
GAT
Ile
>WENV183607127
OODO01001271
100326
Bacillota
GTA
Tyr
>WENV183607206
OODO01002110
144610
Bacillota
GTG
His
>WENV183606728
OODO01000022
240017
Bacillota
GCC
Gly
>WENV183607388
OODO01005731
411547
Bacillota
CTG
Gln
>WENV183607117
OODO01001236
411547
Bacillota
CTG
Gln
>WENV183607030
OODO01000809
411547
Bacillota
CTG
Gln
>WENV183606975
OODO01000579
411547
Bacillota
CTG
Gln
>WENV183607134
OODO01001327
4624
Bacillota
GCT
Ser
>WENV183607009
OODO01000739
4624
Bacillota
GCT
Ser
>WENV183607222
OODO01002203
235095
Bacillota
GGT
Thr
>WENV183607221
OODO01002203
235095
Bacillota
GGT
Thr
>WENV183607233
OODO01002355
411549
Bacillota
TTG
Gln
>WENV183607174
OODO01001762
411549
Bacillota
TTG
Gln
>WENV183606981
OODO01000602
411549
Bacillota
TTG
Gln
>WENV183606835
OODO01000173
235142
Bacillota
CTT
Lys
>WENV183607553
OODO01013706
148188
Bacillota
CCG
Arg
>WENV183607348
OODO01004507
148188
Bacillota
CCG
Arg
>WENV183607325
OODO01003996
148188
Bacillota
CCG
Arg
>WENV183607081
OODO01001033
148188
Bacillota
CCG
Arg
>WENV183607260
OODO01002683
298639
Bacillota
GTT
Asn
>WENV183607569
OODO01015580
80612
Bacillota
GTA
Tyr
>WENV183607708
OODO01037632
236012
Bacillota
GTC
Asp
>WENV183606950
OODO01000479
256380
Bacillota
>WENV183607694
OODO01035984
342833
Bacillota
GTT
Asn
>WENV183607298
OODO01003458
411739
Bacillota
TCC
Gly
>WENV183607239
OODO01002484
235124
Bacillota
TGG
Pro
>WENV183607149
OODO01001448
235124
Bacillota
TGG
Pro
>WENV183607052
OODO01000932
235124
Bacillota
TGG
Pro
>WENV183607302
OODO01003458
237963
Bacillota
TTT
Lys
>WENV183607668
OODO01030499
201667
Bacillota
TCT
Arg
>WENV183607352
OODO01004530
338129
Bacillota
TGT
Thr
>WENV183607276
OODO01003058
338129
Bacillota
TGT
Thr
>WENV183607218
OODO01002198
338129
Bacillota
TGT
Thr
>WENV183607300
OODO01003458
279635
Bacillota
GTG
His
>WENV183607347
OODO01004475
144583
Bacillota
ACG
Arg
>WENV183607219
OODO01002203
235171
Bacillota
CCA
Trp
>WENV183607032
OODO01000811
238974
Bacillota
GAA
Phe
>WENV183607403
OODO01006185
144621
Bacillota
GTT
Asn
>WENV183607351
OODO01004526
144621
Bacillota
GTT
Asn
>WENV183607327
OODO01004095
144621
Bacillota
GTT
Asn
>WENV183607323
OODO01003986
144621
Bacillota
GTT
Asn
>WENV183607224
OODO01002235
144621
Bacillota
GTT
Asn
>WENV183606842
OODO01000187
235113
Bacillota
GAA
Phe
>WENV183607611
OODO01020320
243098
Bacillota
GGT
Thr
>WENV183607463
OODO01008393
58712
Bacillota
CAG
Leu
>WENV183606724
OODO01000022
144762
Bacillota
TCT
Arg
>WENV183607334
OODO01004201
245296
Bacillota
CCC
Gly
>WENV183607305
OODO01003520
245296
Bacillota
CCC
Gly
>WENV183607156
OODO01001590
245296
Bacillota
CCC
Gly
>WENV183606887
OODO01000270
272992
Bacillota
CTT
Lys
>WENV183607279
OODO01003097
144594
Bacillota
CAC
Val
>WENV183606963
OODO01000542
95563
Bacillota
GTA
Tyr
>WENV183606944
OODO01000453
114075
Bacillota
TAG
Leu
>WENV183607530
OODO01011937
338128
Bacillota
TTC
Glu
>WENV183607336
OODO01004241
338128
Bacillota
TTC
Glu
>WENV183607309
OODO01003548
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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