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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170647591
JQIA01039130
106074
Gammaproteobacteria
GAG
Leu
>WENV170646754
JQIA01002728
185151
Gammaproteobacteria
TCT
Arg
>WENV170647273
JQIA01018193
238370
Gammaproteobacteria
TTT
Lys
>WENV170647204
JQIA01015955
375100
Gammaproteobacteria
TTG
Gln
>WENV170646895
JQIA01005150
149066
Gammaproteobacteria
CAT
Met
>WENV170647148
JQIA01013583
238499
Gammaproteobacteria
TAC
Val
>WENV170647582
JQIA01038304
281920
Gammaproteobacteria
CCA
Trp
>WENV170646846
JQIA01004382
283668
Gammaproteobacteria
TTT
Lys
>WENV170647007
JQIA01007750
237225
Gammaproteobacteria
GCC
Gly
>WENV170646658
JQIA01001022
147053
Gammaproteobacteria
GTT
Asn
>WENV170646561
JQIA01000043
190137
Gammaproteobacteria
CAT
Met
>WENV170646649
JQIA01000753
235452
Gammaproteobacteria
GAA
Phe
>WENV170647477
JQIA01030244
159514
Gammaproteobacteria
TGG
Pro
>WENV170647138
JQIA01012884
237221
Gammaproteobacteria
GGC
Ala
>WENV170646998
JQIA01007644
237221
Gammaproteobacteria
GGC
Ala
>WENV170647040
JQIA01008631
241230
Gammaproteobacteria
GAA
Phe
>WENV170647037
JQIA01008551
95590
Gammaproteobacteria
>WENV170647018
JQIA01008233
270849
Gammaproteobacteria
TTC
Glu
>WENV170646716
JQIA01001986
270849
Gammaproteobacteria
TTC
Glu
>WENV170647107
JQIA01011183
95750
Gammaproteobacteria
TAG
Leu
>WENV170646602
JQIA01000190
95750
Gammaproteobacteria
TAG
Leu
>WENV170647015
JQIA01008110
146641
Gammaproteobacteria
ACG
Arg
>WENV170647389
JQIA01024626
421020
Gammaproteobacteria
GCA
Cys
>WENV170646692
JQIA01001590
243902
Gammaproteobacteria
GTT
Asn
>WENV170646708
JQIA01001874
294663
Gammaproteobacteria
TTC
Glu
>WENV170647318
JQIA01020467
237412
Gammaproteobacteria
TAC
Val
>WENV170647056
JQIA01008951
237412
Gammaproteobacteria
TAC
Val
>WENV170647192
JQIA01015403
163554
Gammaproteobacteria
ACG
Arg
>WENV170646665
JQIA01001215
95613
Gammaproteobacteria
CAA
Leu
>WENV170646787
JQIA01003155
428943
Gammaproteobacteria
>WENV170647285
JQIA01018723
154796
Gammaproteobacteria
TCT
Arg
>WENV170647084
JQIA01010051
268904
Gammaproteobacteria
GTG
His
>WENV170646731
JQIA01002383
237223
Gammaproteobacteria
TTT
Lys
>WENV170647331
JQIA01021374
237421
Gammaproteobacteria
TGT
Thr
>WENV170646759
JQIA01002743
240536
Gammaproteobacteria
TTT
Lys
>WENV170647415
JQIA01025656
157977
Gammaproteobacteria
TGG
Pro
>WENV170647325
JQIA01020751
10850
Gammaproteobacteria
TGA
Ser
>WENV170646605
JQIA01000244
24067
Gammaproteobacteria
GGA
Ser
>WENV170647455
JQIA01028072
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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