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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170826977
MDSY01120612
238010
Alphaproteobacteria
TTT
Lys
>WENV170821646
MDSY01025573
148401
Alphaproteobacteria
TGG
Pro
>WENV170824972
MDSY01085444
148401
Alphaproteobacteria
TGG
Pro
>WENV170823950
MDSY01067274
149985
Alphaproteobacteria
ACG
Arg
>WENV170823688
MDSY01062066
147089
Alphaproteobacteria
ACG
Arg
>WENV170825893
MDSY01101837
235509
Alphaproteobacteria
CCA
Trp
>WENV170825273
MDSY01089964
241021
Alphaproteobacteria
GGC
Ala
>WENV170825670
MDSY01097711
241021
Alphaproteobacteria
GGC
Ala
>WENV170827958
MDSY01139540
113700
Alphaproteobacteria
>WENV170827343
MDSY01127332
113700
Alphaproteobacteria
>WENV170823706
MDSY01062300
113700
Alphaproteobacteria
>WENV170821626
MDSY01025090
113700
Alphaproteobacteria
>WENV170827844
MDSY01137530
144964
Alphaproteobacteria
TGG
Pro
>WENV170826806
MDSY01117124
95611
Alphaproteobacteria
TAG
Leu
>WENV170827903
MDSY01138690
338286
Alphaproteobacteria
TTG
Gln
>WENV170827110
MDSY01123134
237197
Alphaproteobacteria
CCA
Trp
>WENV170823004
MDSY01049898
237197
Alphaproteobacteria
CCA
Trp
>WENV170827050
MDSY01121993
338282
Alphaproteobacteria
GTT
Asn
>WENV170823109
MDSY01051641
338282
Alphaproteobacteria
GTT
Asn
>WENV170820710
MDSY01009108
338282
Alphaproteobacteria
GTT
Asn
>WENV170826395
MDSY01109886
339723
Alphaproteobacteria
>WENV170828941
MDSY01158316
147083
Alphaproteobacteria
GGG
Pro
>WENV170824207
MDSY01071689
147083
Alphaproteobacteria
GGG
Pro
>WENV170824115
MDSY01069873
147083
Alphaproteobacteria
GGG
Pro
>WENV170822393
MDSY01039480
147083
Alphaproteobacteria
GGG
Pro
>WENV170828101
MDSY01142841
23620
Alphaproteobacteria
GCT
Ser
>WENV170821109
MDSY01016631
127451
Alphaproteobacteria
GGG
Pro
>WENV170822702
MDSY01044709
339846
Alphaproteobacteria
GAC
Val
>WENV170827843
MDSY01137530
339454
Alphaproteobacteria
>WENV170827842
MDSY01137530
339454
Alphaproteobacteria
>WENV170820483
MDSY01005450
147879
Alphaproteobacteria
TGG
Pro
>WENV170820795
MDSY01011000
148300
Alphaproteobacteria
CCA
Trp
>WENV170821740
MDSY01027236
339490
Alphaproteobacteria
GAC
Val
>WENV170826580
MDSY01113071
147334
Alphaproteobacteria
CAT
Met
>WENV170820364
MDSY01003443
147334
Alphaproteobacteria
CAT
Met
>WENV170825685
MDSY01097886
150172
Alphaproteobacteria
ACG
Arg
>WENV170823076
MDSY01051249
412279
Alphaproteobacteria
CCC
Gly
>WENV170828015
MDSY01141014
96640
Alphaproteobacteria
CAA
Leu
>WENV170824183
MDSY01071257
339750
Alphaproteobacteria
GGT
Thr
>WENV170824173
MDSY01071053
339750
Alphaproteobacteria
GGT
Thr
>WENV170822304
MDSY01037852
341307
Alphaproteobacteria
GTT
Asn
>WENV170822017
MDSY01032557
23672
Alphaproteobacteria
GCT
Ser
>WENV170827342
MDSY01127332
340106
Alphaproteobacteria
GCC
Gly
>WENV170825907
MDSY01102053
340106
Alphaproteobacteria
GCC
Gly
>WENV170821625
MDSY01025090
340106
Alphaproteobacteria
GCC
Gly
>WENV170821478
MDSY01022775
148083
Alphaproteobacteria
ACG
Arg
>WENV170826267
MDSY01108101
341164
Alphaproteobacteria
GCC
Gly
>WENV170824103
MDSY01069666
341164
Alphaproteobacteria
GCC
Gly
>WENV170820522
MDSY01006148
341164
Alphaproteobacteria
GCC
Gly
>WENV170827602
MDSY01132618
59164
Alphaproteobacteria
GAG
Leu
>WENV170824929
MDSY01084663
59164
Alphaproteobacteria
GAG
Leu
>WENV170820719
MDSY01009297
147877
Alphaproteobacteria
GTG
His
>WENV170821392
MDSY01021554
23648
Alphaproteobacteria
CGA
Ser
>WENV170828324
MDSY01147354
148425
Alphaproteobacteria
ACG
Arg
>WENV170820199
MDSY01000213
148425
Alphaproteobacteria
ACG
Arg
>WENV170828513
MDSY01151275
338760
Alphaproteobacteria
GAA
Phe
>WENV170827778
MDSY01136054
147283
Alphaproteobacteria
GTG
His
>WENV170824307
MDSY01073513
147283
Alphaproteobacteria
GTG
His
>WENV170823927
MDSY01066865
147283
Alphaproteobacteria
GTG
His
>WENV170825952
MDSY01102566
147087
Alphaproteobacteria
GTG
His
>WENV170825957
MDSY01102655
150194
Alphaproteobacteria
TCT
Arg
>WENV170824916
MDSY01084371
338287
Alphaproteobacteria
GGT
Thr
>WENV170821287
MDSY01019542
338287
Alphaproteobacteria
GGT
Thr
>WENV170820889
MDSY01013435
338287
Alphaproteobacteria
GGT
Thr
>WENV170827563
MDSY01131684
235430
Alphaproteobacteria
TTT
Lys
>WENV170826406
MDSY01110293
412424
Alphaproteobacteria
TCC
Gly
>WENV170823440
MDSY01057698
412424
Alphaproteobacteria
TCC
Gly
>WENV170821487
MDSY01022991
412424
Alphaproteobacteria
TCC
Gly
>WENV170827712
MDSY01134833
150356
Alphaproteobacteria
GTC
Asp
>WENV170825981
MDSY01103388
147289
Alphaproteobacteria
GTC
Asp
>WENV170821499
MDSY01023056
147289
Alphaproteobacteria
GTC
Asp
>WENV170821498
MDSY01023056
147289
Alphaproteobacteria
GTC
Asp
>WENV170820677
MDSY01008731
237155
Alphaproteobacteria
>WENV170821917
MDSY01030742
146848
Alphaproteobacteria
GTG
His
>WENV170825795
MDSY01100021
236256
Alphaproteobacteria
TAC
Val
>WENV170824137
MDSY01070216
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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