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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
157 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180183101
OAWP01002358
196621
Bacillota
GTC
Asp
>WENV180183129
OAWP01002757
196621
Bacillota
GTC
Asp
>WENV180183362
OAWP01019681
196621
Bacillota
GTC
Asp
>WENV180183212
OAWP01004412
361659
Bacillota
GCC
Gly
>WENV180182803
OAWP01000568
309417
Bacillota
GGC
Ala
>WENV180182913
OAWP01000986
309417
Bacillota
GGC
Ala
>WENV180183312
OAWP01010240
309417
Bacillota
GGC
Ala
>WENV180182978
OAWP01001418
155113
Bacillota
CGG
Pro
>WENV180182972
OAWP01001379
144612
Bacillota
TCT
Arg
>WENV180182584
OAWP01000052
267649
Bacillota
TAC
Val
>WENV180183054
OAWP01002015
267649
Bacillota
TAC
Val
>WENV180183250
OAWP01005769
267649
Bacillota
TAC
Val
>WENV180183076
OAWP01002257
235134
Bacillota
GAA
Phe
>WENV180183285
OAWP01008022
235098
Bacillota
GAC
Val
>WENV180183163
OAWP01003215
235098
Bacillota
GAC
Val
>WENV180183104
OAWP01002372
235098
Bacillota
GAC
Val
>WENV180182751
OAWP01000388
235098
Bacillota
GAC
Val
>WENV180182776
OAWP01000481
338152
Bacillota
TTC
Glu
>WENV180183197
OAWP01004088
148239
Bacillota
TCT
Arg
>WENV180182891
OAWP01000889
148239
Bacillota
TCT
Arg
>WENV180183079
OAWP01002286
44854
Bacillota
TGA
Ser
>WENV180183006
OAWP01001763
44854
Bacillota
TGA
Ser
>WENV180183494
OAWP01051691
144577
Bacillota
GAT
Ile
>WENV180183527
OAWP01075782
304022
Bacillota
GCC
Gly
>WENV180183363
OAWP01019681
304022
Bacillota
GCC
Gly
>WENV180183136
OAWP01002804
304022
Bacillota
GCC
Gly
>WENV180183038
OAWP01001932
304022
Bacillota
GCC
Gly
>WENV180183482
OAWP01045304
429443
Bacillota
GCA
Cys
>WENV180183422
OAWP01036413
302150
Bacillota
TAC
Val
>WENV180183325
OAWP01011990
246023
Bacillota
TGC
Ala
>WENV180183345
OAWP01015537
307003
Bacillota
TGC
Ala
>WENV180183057
OAWP01002051
59312
Bacillota
CAG
Leu
>WENV180183517
OAWP01074195
338147
Bacillota
CTC
Glu
>WENV180183507
OAWP01073525
235150
Bacillota
TGC
Ala
>WENV180183323
OAWP01011510
155273
Bacillota
CAT
Met
>WENV180183211
OAWP01004412
114359
Bacillota
TAG
Leu
>WENV180183366
OAWP01021128
235137
Bacillota
TGC
Ala
>WENV180183232
OAWP01004775
235294
Bacillota
TGC
Ala
>WENV180182615
OAWP01000074
340802
Bacillota
TTG
Gln
>WENV180183462
OAWP01041592
144668
Bacillota
GTC
Asp
>WENV180183311
OAWP01010161
429429
Bacillota
CCA
Trp
>WENV180183206
OAWP01004146
429429
Bacillota
CCA
Trp
>WENV180183021
OAWP01001858
429429
Bacillota
CCA
Trp
>WENV180182923
OAWP01001052
429429
Bacillota
CCA
Trp
>WENV180182689
OAWP01000197
429429
Bacillota
CCA
Trp
>WENV180182664
OAWP01000144
429429
Bacillota
CCA
Trp
>WENV180183182
OAWP01003752
313454
Bacillota
GAA
Phe
>WENV180182946
OAWP01001180
313454
Bacillota
GAA
Phe
>WENV180182739
OAWP01000370
313454
Bacillota
GAA
Phe
>WENV180182708
OAWP01000242
313454
Bacillota
GAA
Phe
>WENV180183361
OAWP01019376
41154
Bacillota
TAA
Leu
>WENV180182999
OAWP01001664
44859
Bacillota
AAG
Leu
>WENV180183390
OAWP01026368
186380
Bacillota
GTC
Asp
>WENV180182898
OAWP01000896
11034
Bacillota
GGA
Ser
>WENV180183508
OAWP01073591
235117
Bacillota
TAC
Val
>WENV180182892
OAWP01000889
156937
Bacillota
GTG
His
>WENV180183262
OAWP01006505
338550
Bacillota
>WENV180183196
OAWP01003992
235079
Bacillota
GAA
Phe
>WENV180183173
OAWP01003508
235079
Bacillota
GAA
Phe
>WENV180183135
OAWP01002804
235079
Bacillota
GAA
Phe
>WENV180183037
OAWP01001932
235079
Bacillota
GAA
Phe
>WENV180183350
OAWP01017950
235087
Bacillota
TGC
Ala
>WENV180182869
OAWP01000789
149041
Bacillota
GTC
Asp
>WENV180183267
OAWP01007128
338149
Bacillota
CTC
Glu
>WENV180183095
OAWP01002319
338149
Bacillota
CTC
Glu
>WENV180183069
OAWP01002142
338149
Bacillota
CTC
Glu
>WENV180183177
OAWP01003623
271471
Bacillota
GCC
Gly
>WENV180183275
OAWP01007479
245298
Bacillota
CGG
Pro
>WENV180183210
OAWP01004349
245298
Bacillota
CGG
Pro
>WENV180183374
OAWP01023586
37269
Bacillota
TGA
Ser
>WENV180182801
OAWP01000565
37269
Bacillota
TGA
Ser
>WENV180182662
OAWP01000130
155089
Bacillota
CAT
Met
>WENV180182775
OAWP01000481
287000
Bacillota
GTT
Asn
>WENV180183140
OAWP01002854
413152
Bacillota
TCC
Gly
>WENV180182646
OAWP01000109
162445
Bacillota
CAT
Met
>WENV180182644
OAWP01000109
162445
Bacillota
CAT
Met
>WENV180183433
OAWP01036710
201704
Bacillota
GAT
Ile
>WENV180183297
OAWP01009156
152492
Bacillota
GGG
Pro
>WENV180183164
OAWP01003245
152492
Bacillota
GGG
Pro
>WENV180182649
OAWP01000111
152492
Bacillota
GGG
Pro
>WENV180183059
OAWP01002095
144599
Bacillota
GTC
Asp
>WENV180183047
OAWP01001994
144599
Bacillota
GTC
Asp
>WENV180182780
OAWP01000483
100326
Bacillota
GTA
Tyr
>WENV180182620
OAWP01000080
100326
Bacillota
GTA
Tyr
>WENV180183470
OAWP01043389
144610
Bacillota
GTG
His
>WENV180183198
OAWP01004088
144610
Bacillota
GTG
His
>WENV180182614
OAWP01000074
144610
Bacillota
GTG
His
>WENV180183077
OAWP01002257
240017
Bacillota
GCC
Gly
>WENV180183033
OAWP01001897
240017
Bacillota
GCC
Gly
>WENV180183274
OAWP01007479
411547
Bacillota
CTG
Gln
>WENV180183209
OAWP01004349
411547
Bacillota
CTG
Gln
>WENV180183053
OAWP01002002
411547
Bacillota
CTG
Gln
>WENV180182957
OAWP01001256
411547
Bacillota
CTG
Gln
>WENV180182819
OAWP01000607
147684
Bacillota
ACG
Arg
>WENV180183080
OAWP01002286
4624
Bacillota
GCT
Ser
>WENV180183007
OAWP01001763
4624
Bacillota
GCT
Ser
>WENV180183389
OAWP01026368
263765
Bacillota
TAC
Val
>WENV180183074
OAWP01002257
263765
Bacillota
TAC
Val
>WENV180183032
OAWP01001897
263765
Bacillota
TAC
Val
>WENV180183504
OAWP01064947
412387
Bacillota
GCA
Cys
>WENV180183183
OAWP01003752
313164
Bacillota
TTT
Lys
>WENV180183131
OAWP01002757
235095
Bacillota
GGT
Thr
>WENV180183130
OAWP01002757
235095
Bacillota
GGT
Thr
>WENV180183103
OAWP01002358
235095
Bacillota
GGT
Thr
>WENV180183102
OAWP01002358
235095
Bacillota
GGT
Thr
>WENV180182867
OAWP01000789
239832
Bacillota
TGT
Thr
>WENV180183509
OAWP01073597
198159
Bacillota
CAT
Met
>WENV180183202
OAWP01004113
411549
Bacillota
TTG
Gln
>WENV180183127
OAWP01002723
411549
Bacillota
TTG
Gln
>WENV180183411
OAWP01032663
59296
Bacillota
AAG
Leu
>WENV180183056
OAWP01002029
148188
Bacillota
CCG
Arg
>WENV180182759
OAWP01000411
148188
Bacillota
CCG
Arg
>WENV180183195
OAWP01003964
80612
Bacillota
GTA
Tyr
>WENV180182651
OAWP01000115
256380
Bacillota
>WENV180183216
OAWP01004412
411739
Bacillota
TCC
Gly
>WENV180183213
OAWP01004412
411739
Bacillota
TCC
Gly
>WENV180183476
OAWP01044881
235638
Bacillota
GAA
Phe
>WENV180183244
OAWP01005578
235124
Bacillota
TGG
Pro
>WENV180182934
OAWP01001086
235124
Bacillota
TGG
Pro
>WENV180183221
OAWP01004412
237963
Bacillota
TTT
Lys
>WENV180183217
OAWP01004412
201667
Bacillota
TCT
Arg
>WENV180183214
OAWP01004412
201667
Bacillota
TCT
Arg
>WENV180183245
OAWP01005611
338129
Bacillota
TGT
Thr
>WENV180182969
OAWP01001367
338129
Bacillota
TGT
Thr
>WENV180183219
OAWP01004412
279635
Bacillota
GTG
His
>WENV180183449
OAWP01040165
319167
Bacillota
CAT
Met
>WENV180183272
OAWP01007455
144583
Bacillota
ACG
Arg
>WENV180183230
OAWP01004756
144583
Bacillota
ACG
Arg
>WENV180182747
OAWP01000386
144652
Bacillota
GTC
Asp
>WENV180183475
OAWP01044764
247734
Bacillota
TGC
Ala
>WENV180183128
OAWP01002757
235171
Bacillota
CCA
Trp
>WENV180183100
OAWP01002358
235171
Bacillota
CCA
Trp
>WENV180182975
OAWP01001385
238974
Bacillota
GAA
Phe
>WENV180182853
OAWP01000707
238974
Bacillota
GAA
Phe
>WENV180182778
OAWP01000483
238974
Bacillota
GAA
Phe
>WENV180182647
OAWP01000110
238974
Bacillota
GAA
Phe
>WENV180183526
OAWP01075741
144621
Bacillota
GTT
Asn
>WENV180183192
OAWP01003888
144621
Bacillota
GTT
Asn
>WENV180183096
OAWP01002319
144621
Bacillota
GTT
Asn
>WENV180183388
OAWP01026368
353527
Bacillota
TTC
Glu
>WENV180183521
OAWP01075008
58712
Bacillota
CAG
Leu
>WENV180183158
OAWP01003110
58712
Bacillota
CAG
Leu
>WENV180183124
OAWP01002686
58712
Bacillota
CAG
Leu
>WENV180182974
OAWP01001379
58712
Bacillota
CAG
Leu
>WENV180183447
OAWP01039432
144762
Bacillota
TCT
Arg
>WENV180183066
OAWP01002127
245296
Bacillota
CCC
Gly
>WENV180182915
OAWP01001008
245296
Bacillota
CCC
Gly
>WENV180183268
OAWP01007128
272992
Bacillota
CTT
Lys
>WENV180183179
OAWP01003654
272992
Bacillota
CTT
Lys
>WENV180182613
OAWP01000074
157635
Bacillota
TCT
Arg
>WENV180183239
OAWP01005056
144594
Bacillota
CAC
Val
>WENV180183145
OAWP01002888
144594
Bacillota
CAC
Val
>WENV180182623
OAWP01000083
414486
Bacillota
CCC
Gly
>WENV180183201
OAWP01004088
114075
Bacillota
TAG
Leu
>WENV180183385
OAWP01025992
338207
Bacillota
TTC
Glu
>WENV180183261
OAWP01006494
338128
Bacillota
TTC
Glu
>WENV180183106
OAWP01002386
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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