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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180236374
OBCV01005973
144612
Bacillota
TCT
Arg
>WENV180236430
OBCV01008822
267649
Bacillota
TAC
Val
>WENV180236558
OBCV01032999
267649
Bacillota
TAC
Val
>WENV180236708
OBCV01125577
156189
Bacillota
GAT
Ile
>WENV180236314
OBCV01002933
235098
Bacillota
GAC
Val
>WENV180236679
OBCV01090391
338152
Bacillota
TTC
Glu
>WENV180236688
OBCV01099717
148239
Bacillota
TCT
Arg
>WENV180236360
OBCV01005493
44854
Bacillota
TGA
Ser
>WENV180236524
OBCV01025476
235154
Bacillota
GTT
Asn
>WENV180236229
OBCV01000633
59312
Bacillota
CAG
Leu
>WENV180236219
OBCV01000531
238910
Bacillota
CTT
Lys
>WENV180236717
OBCV01127030
338147
Bacillota
CTC
Glu
>WENV180236485
OBCV01017897
338147
Bacillota
CTC
Glu
>WENV180236408
OBCV01007410
235150
Bacillota
TGC
Ala
>WENV180236478
OBCV01015911
235114
Bacillota
TTT
Lys
>WENV180236372
OBCV01005811
235114
Bacillota
TTT
Lys
>WENV180236493
OBCV01019571
182792
Bacillota
GTC
Asp
>WENV180236308
OBCV01002849
182792
Bacillota
GTC
Asp
>WENV180236706
OBCV01117563
44859
Bacillota
AAG
Leu
>WENV180236454
OBCV01011051
268272
Bacillota
TGC
Ala
>WENV180236435
OBCV01009066
11034
Bacillota
GGA
Ser
>WENV180236669
OBCV01081295
156937
Bacillota
GTG
His
>WENV180236185
OBCV01000251
274189
Bacillota
TGT
Thr
>WENV180236495
OBCV01019937
235079
Bacillota
GAA
Phe
>WENV180236309
OBCV01002849
235079
Bacillota
GAA
Phe
>WENV180236289
OBCV01002268
173314
Bacillota
GAT
Ile
>WENV180236590
OBCV01040160
149041
Bacillota
GTC
Asp
>WENV180236241
OBCV01000890
338149
Bacillota
CTC
Glu
>WENV180236234
OBCV01000736
271471
Bacillota
GCC
Gly
>WENV180236225
OBCV01000567
271471
Bacillota
GCC
Gly
>WENV180236347
OBCV01004461
169968
Bacillota
CAT
Met
>WENV180236629
OBCV01054686
162445
Bacillota
CAT
Met
>WENV180236681
OBCV01093265
152492
Bacillota
GGG
Pro
>WENV180236586
OBCV01039503
144599
Bacillota
GTC
Asp
>WENV180236604
OBCV01047202
235078
Bacillota
TAC
Val
>WENV180236452
OBCV01011038
235078
Bacillota
TAC
Val
>WENV180236411
OBCV01007625
100326
Bacillota
GTA
Tyr
>WENV180236711
OBCV01125676
144610
Bacillota
GTG
His
>WENV180236453
OBCV01011038
240017
Bacillota
GCC
Gly
>WENV180236251
OBCV01001140
411547
Bacillota
CTG
Gln
>WENV180236361
OBCV01005493
4624
Bacillota
GCT
Ser
>WENV180236232
OBCV01000736
263765
Bacillota
TAC
Val
>WENV180236702
OBCV01112110
18852
Bacillota
GCT
Ser
>WENV180236462
OBCV01013409
235095
Bacillota
GGT
Thr
>WENV180236598
OBCV01042902
239832
Bacillota
TGT
Thr
>WENV180236439
OBCV01009441
411549
Bacillota
TTG
Gln
>WENV180236222
OBCV01000531
245386
Bacillota
CCA
Trp
>WENV180236460
OBCV01013272
148188
Bacillota
CCG
Arg
>WENV180236525
OBCV01026440
235127
Bacillota
TTT
Lys
>WENV180236245
OBCV01001071
235124
Bacillota
TGG
Pro
>WENV180236370
OBCV01005765
338129
Bacillota
TGT
Thr
>WENV180236526
OBCV01026546
144583
Bacillota
ACG
Arg
>WENV180236512
OBCV01024252
144652
Bacillota
GTC
Asp
>WENV180236339
OBCV01004117
247734
Bacillota
TGC
Ala
>WENV180236492
OBCV01019571
235171
Bacillota
CCA
Trp
>WENV180236385
OBCV01006212
144621
Bacillota
GTT
Asn
>WENV180236371
OBCV01005811
235113
Bacillota
GAA
Phe
>WENV180236296
OBCV01002447
58712
Bacillota
CAG
Leu
>WENV180236416
OBCV01007822
245296
Bacillota
CCC
Gly
>WENV180236242
OBCV01000890
272992
Bacillota
CTT
Lys
>WENV180236601
OBCV01044557
344240
Bacillota
GCC
Gly
>WENV180236293
OBCV01002306
144594
Bacillota
CAC
Val
>WENV180236298
OBCV01002583
414486
Bacillota
CCC
Gly
>WENV180236348
OBCV01004461
272488
Bacillota
GAA
Phe
>WENV180236319
OBCV01003154
272488
Bacillota
GAA
Phe
>WENV180236404
OBCV01007181
238945
Bacillota
GCC
Gly
>WENV180236367
OBCV01005635
238945
Bacillota
GCC
Gly
>WENV180236260
OBCV01001316
238945
Bacillota
GCC
Gly
>WENV180236310
OBCV01002849
249259
Bacillota
GCC
Gly
>WENV180236640
OBCV01061958
273862
Bacillota
TGC
Ala
>WENV180236288
OBCV01002268
273862
Bacillota
TGC
Ala
>WENV180236304
OBCV01002712
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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