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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180238832
OBDA01042396
24650
Bacillota
TAA
Leu
>WENV180238807
OBDA01035234
144612
Bacillota
TCT
Arg
>WENV180238653
OBDA01011044
235134
Bacillota
GAA
Phe
>WENV180238828
OBDA01041917
338152
Bacillota
TTC
Glu
>WENV180238873
OBDA01059368
44854
Bacillota
TGA
Ser
>WENV180238755
OBDA01026373
235154
Bacillota
GTT
Asn
>WENV180238443
OBDA01000557
37071
Bacillota
TGA
Ser
>WENV180238399
OBDA01000120
59312
Bacillota
CAG
Leu
>WENV180238587
OBDA01006090
238910
Bacillota
CTT
Lys
>WENV180238465
OBDA01001103
338147
Bacillota
CTC
Glu
>WENV180238410
OBDA01000192
338147
Bacillota
CTC
Glu
>WENV180239015
OBDA01162534
235137
Bacillota
TGC
Ala
>WENV180238983
OBDA01125276
235114
Bacillota
TTT
Lys
>WENV180238674
OBDA01013704
182792
Bacillota
GTC
Asp
>WENV180238398
OBDA01000120
44859
Bacillota
AAG
Leu
>WENV180238895
OBDA01068028
11034
Bacillota
GGA
Ser
>WENV180238426
OBDA01000316
274189
Bacillota
TGT
Thr
>WENV180239043
OBDA01185018
235079
Bacillota
GAA
Phe
>WENV180238493
OBDA01001819
173314
Bacillota
GAT
Ile
>WENV180239054
OBDA01185410
338149
Bacillota
CTC
Glu
>WENV180238867
OBDA01056828
245298
Bacillota
CGG
Pro
>WENV180238774
OBDA01029155
37269
Bacillota
TGA
Ser
>WENV180238944
OBDA01089714
169968
Bacillota
CAT
Met
>WENV180238835
OBDA01044748
162445
Bacillota
CAT
Met
>WENV180238973
OBDA01120476
152492
Bacillota
GGG
Pro
>WENV180238767
OBDA01027980
152492
Bacillota
GGG
Pro
>WENV180238805
OBDA01034916
235078
Bacillota
TAC
Val
>WENV180238846
OBDA01049918
144610
Bacillota
GTG
His
>WENV180238654
OBDA01011044
240017
Bacillota
GCC
Gly
>WENV180238740
OBDA01024941
411547
Bacillota
CTG
Gln
>WENV180238874
OBDA01059368
4624
Bacillota
GCT
Ser
>WENV180238651
OBDA01011044
263765
Bacillota
TAC
Val
>WENV180238675
OBDA01013704
235095
Bacillota
GGT
Thr
>WENV180238400
OBDA01000123
235142
Bacillota
CTT
Lys
>WENV180238613
OBDA01008365
245386
Bacillota
CCA
Trp
>WENV180238850
OBDA01050680
148188
Bacillota
CCG
Arg
>WENV180238589
OBDA01006158
80612
Bacillota
GTA
Tyr
>WENV180238444
OBDA01000566
163943
Bacillota
GTC
Asp
>WENV180239007
OBDA01150503
241432
Bacillota
TGT
Thr
>WENV180238522
OBDA01002895
144583
Bacillota
ACG
Arg
>WENV180239036
OBDA01183013
144672
Bacillota
TCT
Arg
>WENV180238742
OBDA01025226
144652
Bacillota
GTC
Asp
>WENV180238887
OBDA01066132
247734
Bacillota
TGC
Ala
>WENV180238673
OBDA01013704
235171
Bacillota
CCA
Trp
>WENV180238972
OBDA01119430
144621
Bacillota
GTT
Asn
>WENV180238570
OBDA01004939
235113
Bacillota
GAA
Phe
>WENV180238506
OBDA01002098
58712
Bacillota
CAG
Leu
>WENV180238904
OBDA01071822
272992
Bacillota
CTT
Lys
>WENV180238845
OBDA01049918
157635
Bacillota
TCT
Arg
>WENV180238899
OBDA01069889
144594
Bacillota
CAC
Val
>WENV180238416
OBDA01000231
95563
Bacillota
GTA
Tyr
>WENV180239047
OBDA01185069
272488
Bacillota
GAA
Phe
>WENV180238947
OBDA01092778
238945
Bacillota
GCC
Gly
>WENV180238492
OBDA01001819
273862
Bacillota
TGC
Ala
>WENV180238909
OBDA01072877
338128
Bacillota
TTC
Glu
>WENV180238461
OBDA01000981
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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