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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180454168
OBXM01007192
243647
Bacillota
TTT
Lys
>WENV180454136
OBXM01006581
202812
Bacillota
CAT
Met
>WENV180453722
OBXM01000570
37213
Bacillota
TGA
Ser
>WENV180453962
OBXM01002621
144612
Bacillota
TCT
Arg
>WENV180453371
OBXM01000061
154063
Bacillota
CGG
Pro
>WENV180453393
OBXM01000073
154063
Bacillota
CGG
Pro
>WENV180453884
OBXM01001527
154063
Bacillota
CGG
Pro
>WENV180454017
OBXM01003731
154063
Bacillota
CGG
Pro
>WENV180453399
OBXM01000081
267649
Bacillota
TAC
Val
>WENV180454349
OBXM01026798
267649
Bacillota
TAC
Val
>WENV180454407
OBXM01041797
339890
Bacillota
TTG
Gln
>WENV180454212
OBXM01009683
338152
Bacillota
TTC
Glu
>WENV180453344
OBXM01000042
242961
Bacillota
GGT
Thr
>WENV180454250
OBXM01012459
23769
Bacillota
TAA
Leu
>WENV180454102
OBXM01005228
23769
Bacillota
TAA
Leu
>WENV180453406
OBXM01000088
193699
Bacillota
CAT
Met
>WENV180454434
OBXM01049538
235154
Bacillota
GTT
Asn
>WENV180454021
OBXM01003734
241441
Bacillota
GCC
Gly
>WENV180454318
OBXM01020533
10912
Bacillota
GGA
Ser
>WENV180454372
OBXM01031199
429443
Bacillota
GCA
Cys
>WENV180454111
OBXM01005804
246023
Bacillota
TGC
Ala
>WENV180454352
OBXM01027235
307003
Bacillota
TGC
Ala
>WENV180454281
OBXM01016742
106079
Bacillota
TAG
Leu
>WENV180454222
OBXM01010611
59312
Bacillota
CAG
Leu
>WENV180454279
OBXM01016742
314571
Bacillota
TAC
Val
>WENV180454360
OBXM01030478
235137
Bacillota
TGC
Ala
>WENV180454341
OBXM01025398
235137
Bacillota
TGC
Ala
>WENV180454331
OBXM01022547
235137
Bacillota
TGC
Ala
>WENV180454169
OBXM01007192
391536
Bacillota
TTC
Glu
>WENV180454098
OBXM01005093
235294
Bacillota
TGC
Ala
>WENV180453600
OBXM01000308
340802
Bacillota
TTG
Gln
>WENV180454368
OBXM01030912
338143
Bacillota
CTC
Glu
>WENV180453957
OBXM01002557
338143
Bacillota
CTC
Glu
>WENV180453878
OBXM01001478
338143
Bacillota
CTC
Glu
>WENV180453877
OBXM01001478
338143
Bacillota
CTC
Glu
>WENV180453455
OBXM01000122
338143
Bacillota
CTC
Glu
>WENV180453454
OBXM01000122
338143
Bacillota
CTC
Glu
>WENV180454256
OBXM01013112
341763
Bacillota
CTC
Glu
>WENV180453686
OBXM01000447
144668
Bacillota
GTC
Asp
>WENV180453879
OBXM01001481
429429
Bacillota
CCA
Trp
>WENV180454006
OBXM01003392
313454
Bacillota
GAA
Phe
>WENV180453869
OBXM01001400
313454
Bacillota
GAA
Phe
>WENV180453778
OBXM01000741
313454
Bacillota
GAA
Phe
>WENV180453709
OBXM01000510
313454
Bacillota
GAA
Phe
>WENV180453702
OBXM01000500
313454
Bacillota
GAA
Phe
>WENV180453677
OBXM01000425
313454
Bacillota
GAA
Phe
>WENV180453666
OBXM01000402
313454
Bacillota
GAA
Phe
>WENV180454047
OBXM01004437
41154
Bacillota
TAA
Leu
>WENV180453687
OBXM01000447
41154
Bacillota
TAA
Leu
>WENV180453550
OBXM01000219
41154
Bacillota
TAA
Leu
>WENV180454357
OBXM01029167
16834
Bacillota
GCT
Ser
>WENV180454395
OBXM01036338
247057
Bacillota
TGC
Ala
>WENV180453397
OBXM01000077
16778
Bacillota
CGA
Ser
>WENV180454430
OBXM01048961
235079
Bacillota
GAA
Phe
>WENV180453905
OBXM01001745
235079
Bacillota
GAA
Phe
>WENV180454285
OBXM01016742
162028
Bacillota
ACG
Arg
>WENV180454170
OBXM01007192
243612
Bacillota
TAC
Val
>WENV180454378
OBXM01031698
149041
Bacillota
GTC
Asp
>WENV180454194
OBXM01008038
316443
Bacillota
GTC
Asp
>WENV180454231
OBXM01010755
144766
Bacillota
CAT
Met
>WENV180454354
OBXM01027831
37269
Bacillota
TGA
Ser
>WENV180453461
OBXM01000131
37269
Bacillota
TGA
Ser
>WENV180453742
OBXM01000669
155089
Bacillota
CAT
Met
>WENV180454147
OBXM01006819
287000
Bacillota
GTT
Asn
>WENV180453447
OBXM01000119
169968
Bacillota
CAT
Met
>WENV180454086
OBXM01004928
413152
Bacillota
TCC
Gly
>WENV180454110
OBXM01005804
201704
Bacillota
GAT
Ile
>WENV180454325
OBXM01021116
147135
Bacillota
ACG
Arg
>WENV180453547
OBXM01000217
147684
Bacillota
ACG
Arg
>WENV180454400
OBXM01039260
342895
Bacillota
CAT
Met
>WENV180453479
OBXM01000150
10680
Bacillota
GGA
Ser
>WENV180454213
OBXM01009683
412387
Bacillota
GCA
Cys
>WENV180453797
OBXM01000869
412387
Bacillota
GCA
Cys
>WENV180454030
OBXM01003934
313164
Bacillota
TTT
Lys
>WENV180453667
OBXM01000402
313164
Bacillota
TTT
Lys
>WENV180453601
OBXM01000308
313164
Bacillota
TTT
Lys
>WENV180453309
OBXM01000017
313164
Bacillota
TTT
Lys
>WENV180453307
OBXM01000017
313164
Bacillota
TTT
Lys
>WENV180454196
OBXM01008038
109476
Bacillota
TAG
Leu
>WENV180453718
OBXM01000532
18852
Bacillota
GCT
Ser
>WENV180454409
OBXM01042151
314670
Bacillota
GAA
Phe
>WENV180453831
OBXM01001118
239832
Bacillota
TGT
Thr
>WENV180453942
OBXM01002210
59296
Bacillota
AAG
Leu
>WENV180453936
OBXM01002098
59296
Bacillota
AAG
Leu
>WENV180454003
OBXM01003351
146785
Bacillota
>WENV180454218
OBXM01010231
235197
Bacillota
GTC
Asp
>WENV180453388
OBXM01000067
342664
Bacillota
>WENV180454171
OBXM01007192
368876
Bacillota
GCC
Gly
>WENV180453464
OBXM01000135
96872
Bacillota
>WENV180454412
OBXM01042469
147674
Bacillota
TCT
Arg
>WENV180454027
OBXM01003934
147674
Bacillota
TCT
Arg
>WENV180454233
OBXM01010755
163753
Bacillota
TGG
Pro
>WENV180454413
OBXM01043641
118077
Bacillota
>WENV180454299
OBXM01018345
436750
Bacillota
TCC
Gly
>WENV180454225
OBXM01010755
436750
Bacillota
TCC
Gly
>WENV180454166
OBXM01007192
243613
Bacillota
GTG
His
>WENV180453611
OBXM01000328
144672
Bacillota
TCT
Arg
>WENV180453576
OBXM01000258
144672
Bacillota
TCT
Arg
>WENV180453507
OBXM01000170
144672
Bacillota
TCT
Arg
>WENV180453544
OBXM01000217
144652
Bacillota
GTC
Asp
>WENV180454339
OBXM01025098
247734
Bacillota
TGC
Ala
>WENV180454428
OBXM01048794
419877
Bacillota
TCC
Gly
>WENV180453707
OBXM01000510
419877
Bacillota
TCC
Gly
>WENV180454316
OBXM01020454
152491
Bacillota
CAT
Met
>WENV180453674
OBXM01000419
21693
Bacillota
GCT
Ser
>WENV180454226
OBXM01010755
144762
Bacillota
TCT
Arg
>WENV180454315
OBXM01020454
281472
Bacillota
GGT
Thr
>WENV180453484
OBXM01000157
272488
Bacillota
GAA
Phe
>WENV180453448
OBXM01000119
272488
Bacillota
GAA
Phe
>WENV180453835
OBXM01001120
119513
Bacillota
CAA
Leu
>WENV180454134
OBXM01006332
157105
Bacillota
GAT
Ile
>WENV180454167
OBXM01007192
343027
Bacillota
TTG
Gln
>WENV180454433
OBXM01049475
338131
Bacillota
GCC
Gly
>WENV180453986
OBXM01002954
338131
Bacillota
GCC
Gly
>WENV180453668
OBXM01000407
338131
Bacillota
GCC
Gly
>WENV180453645
OBXM01000373
338131
Bacillota
GCC
Gly
>WENV180453285
OBXM01000006
338131
Bacillota
GCC
Gly
>WENV180454298
OBXM01018345
338207
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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