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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
127 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180461920
OBYB01000010
100326
Bacillota
GTA
Tyr
>WENV180461922
OBYB01000010
238974
Bacillota
GAA
Phe
>WENV180461926
OBYB01000010
37269
Bacillota
TGA
Ser
>WENV180461949
OBYB01000030
256380
Bacillota
>WENV180461964
OBYB01000039
41154
Bacillota
TAA
Leu
>WENV180461965
OBYB01000039
147684
Bacillota
ACG
Arg
>WENV180461968
OBYB01000039
157635
Bacillota
TCT
Arg
>WENV180461969
OBYB01000039
144610
Bacillota
GTG
His
>WENV180461970
OBYB01000039
340802
Bacillota
TTG
Gln
>WENV180461991
OBYB01000068
272488
Bacillota
GAA
Phe
>WENV180462054
OBYB01000127
313454
Bacillota
GAA
Phe
>WENV180462064
OBYB01000134
100326
Bacillota
GTA
Tyr
>WENV180462066
OBYB01000134
238974
Bacillota
GAA
Phe
>WENV180462089
OBYB01000158
148239
Bacillota
TCT
Arg
>WENV180462090
OBYB01000158
144610
Bacillota
GTG
His
>WENV180462104
OBYB01000173
235079
Bacillota
GAA
Phe
>WENV180462105
OBYB01000173
304022
Bacillota
GCC
Gly
>WENV180462106
OBYB01000173
196621
Bacillota
GTC
Asp
>WENV180462107
OBYB01000173
304022
Bacillota
GCC
Gly
>WENV180462109
OBYB01000173
80612
Bacillota
GTA
Tyr
>WENV180462131
OBYB01000229
169968
Bacillota
CAT
Met
>WENV180462132
OBYB01000229
272488
Bacillota
GAA
Phe
>WENV180462168
OBYB01000332
37269
Bacillota
TGA
Ser
>WENV180462177
OBYB01000360
59312
Bacillota
CAG
Leu
>WENV180462180
OBYB01000378
37269
Bacillota
TGA
Ser
>WENV180462185
OBYB01000386
429429
Bacillota
CCA
Trp
>WENV180462209
OBYB01000495
37213
Bacillota
TGA
Ser
>WENV180462224
OBYB01000561
144672
Bacillota
TCT
Arg
>WENV180462226
OBYB01000561
313164
Bacillota
TTT
Lys
>WENV180462238
OBYB01000617
169968
Bacillota
CAT
Met
>WENV180462239
OBYB01000617
313454
Bacillota
GAA
Phe
>WENV180462270
OBYB01000829
148239
Bacillota
TCT
Arg
>WENV180462271
OBYB01000829
156937
Bacillota
GTG
His
>WENV180462278
OBYB01000893
144621
Bacillota
GTT
Asn
>WENV180462286
OBYB01000933
304022
Bacillota
GCC
Gly
>WENV180462287
OBYB01000933
235117
Bacillota
TAC
Val
>WENV180462288
OBYB01000933
196621
Bacillota
GTC
Asp
>WENV180462289
OBYB01000933
235079
Bacillota
GAA
Phe
>WENV180462290
OBYB01000933
304022
Bacillota
GCC
Gly
>WENV180462295
OBYB01000956
239832
Bacillota
TGT
Thr
>WENV180462297
OBYB01000956
149041
Bacillota
GTC
Asp
>WENV180462304
OBYB01000971
411547
Bacillota
CTG
Gln
>WENV180462309
OBYB01001046
235124
Bacillota
TGG
Pro
>WENV180462312
OBYB01001064
162445
Bacillota
CAT
Met
>WENV180462321
OBYB01001172
144594
Bacillota
CAC
Val
>WENV180462347
OBYB01001363
272992
Bacillota
CTT
Lys
>WENV180462358
OBYB01001488
235087
Bacillota
TGC
Ala
>WENV180462359
OBYB01001488
144577
Bacillota
GAT
Ile
>WENV180462360
OBYB01001506
152492
Bacillota
GGG
Pro
>WENV180462361
OBYB01001509
235124
Bacillota
TGG
Pro
>WENV180462363
OBYB01001555
338149
Bacillota
CTC
Glu
>WENV180462364
OBYB01001555
144621
Bacillota
GTT
Asn
>WENV180462382
OBYB01001704
411547
Bacillota
CTG
Gln
>WENV180462386
OBYB01001766
157838
Bacillota
GTC
Asp
>WENV180462390
OBYB01001837
44854
Bacillota
TGA
Ser
>WENV180462391
OBYB01001837
4624
Bacillota
GCT
Ser
>WENV180462392
OBYB01001838
144594
Bacillota
CAC
Val
>WENV180462401
OBYB01001945
411549
Bacillota
TTG
Gln
>WENV180462403
OBYB01001958
411547
Bacillota
CTG
Gln
>WENV180462404
OBYB01001958
245298
Bacillota
CGG
Pro
>WENV180462416
OBYB01002147
309417
Bacillota
GGC
Ala
>WENV180462418
OBYB01002180
58712
Bacillota
CAG
Leu
>WENV180462423
OBYB01002295
235171
Bacillota
CCA
Trp
>WENV180462424
OBYB01002295
196621
Bacillota
GTC
Asp
>WENV180462425
OBYB01002295
235095
Bacillota
GGT
Thr
>WENV180462430
OBYB01002365
245296
Bacillota
CCC
Gly
>WENV180462434
OBYB01002448
338129
Bacillota
TGT
Thr
>WENV180462443
OBYB01002576
80612
Bacillota
GTA
Tyr
>WENV180462447
OBYB01002693
307003
Bacillota
TGC
Ala
>WENV180462449
OBYB01002720
148188
Bacillota
CCG
Arg
>WENV180462463
OBYB01003114
144583
Bacillota
ACG
Arg
>WENV180462465
OBYB01003159
235079
Bacillota
GAA
Phe
>WENV180462466
OBYB01003159
304022
Bacillota
GCC
Gly
>WENV180462477
OBYB01003680
80612
Bacillota
GTA
Tyr
>WENV180462482
OBYB01003792
11034
Bacillota
GGA
Ser
>WENV180462485
OBYB01003829
235098
Bacillota
GAC
Val
>WENV180462493
OBYB01004076
58712
Bacillota
CAG
Leu
>WENV180462496
OBYB01004276
18852
Bacillota
GCT
Ser
>WENV180462499
OBYB01004417
338149
Bacillota
CTC
Glu
>WENV180462500
OBYB01004417
144621
Bacillota
GTT
Asn
>WENV180462501
OBYB01004418
44854
Bacillota
TGA
Ser
>WENV180462502
OBYB01004418
4624
Bacillota
GCT
Ser
>WENV180462511
OBYB01004794
235095
Bacillota
GGT
Thr
>WENV180462512
OBYB01004794
196621
Bacillota
GTC
Asp
>WENV180462513
OBYB01004794
235095
Bacillota
GGT
Thr
>WENV180462520
OBYB01005096
429429
Bacillota
CCA
Trp
>WENV180462544
OBYB01007108
235098
Bacillota
GAC
Val
>WENV180462546
OBYB01007135
338128
Bacillota
TTC
Glu
>WENV180462561
OBYB01008295
412387
Bacillota
GCA
Cys
>WENV180462563
OBYB01008702
272992
Bacillota
CTT
Lys
>WENV180462573
OBYB01009193
338129
Bacillota
TGT
Thr
>WENV180462574
OBYB01009193
80612
Bacillota
GTA
Tyr
>WENV180462576
OBYB01009477
58712
Bacillota
CAG
Leu
>WENV180462589
OBYB01010639
144612
Bacillota
TCT
Arg
>WENV180462600
OBYB01013256
148188
Bacillota
CCG
Arg
>WENV180462605
OBYB01013380
316443
Bacillota
GTC
Asp
>WENV180462607
OBYB01013380
109476
Bacillota
TAG
Leu
>WENV180462613
OBYB01013571
436750
Bacillota
TCC
Gly
>WENV180462618
OBYB01013571
118077
Bacillota
>WENV180462620
OBYB01013571
144762
Bacillota
TCT
Arg
>WENV180462625
OBYB01013818
58712
Bacillota
CAG
Leu
>WENV180462632
OBYB01014838
144583
Bacillota
ACG
Arg
>WENV180462634
OBYB01014981
341763
Bacillota
CTC
Glu
>WENV180462645
OBYB01016930
235150
Bacillota
TGC
Ala
>WENV180462666
OBYB01021312
287000
Bacillota
GTT
Asn
>WENV180462678
OBYB01024232
59296
Bacillota
AAG
Leu
>WENV180462687
OBYB01027031
201704
Bacillota
GAT
Ile
>WENV180462688
OBYB01027031
246023
Bacillota
TGC
Ala
>WENV180462706
OBYB01032014
339890
Bacillota
TTG
Gln
>WENV180462739
OBYB01048178
37193
Bacillota
TAA
Leu
>WENV180462740
OBYB01048178
162028
Bacillota
ACG
Arg
>WENV180462745
OBYB01049937
144621
Bacillota
GTT
Asn
>WENV180462766
OBYB01054778
338207
Bacillota
TTC
Glu
>WENV180462767
OBYB01054920
368876
Bacillota
GCC
Gly
>WENV180462768
OBYB01054920
287034
Bacillota
GTT
Asn
>WENV180462772
OBYB01056736
243647
Bacillota
TTT
Lys
>WENV180462773
OBYB01056736
391536
Bacillota
TTC
Glu
>WENV180462774
OBYB01056736
243612
Bacillota
TAC
Val
>WENV180462779
OBYB01057696
235294
Bacillota
TGC
Ala
>WENV180462807
OBYB01070912
236012
Bacillota
GTC
Asp
>WENV180462808
OBYB01072633
338143
Bacillota
CTC
Glu
>WENV180462812
OBYB01073820
144668
Bacillota
GTC
Asp
>WENV180462813
OBYB01074846
281472
Bacillota
GGT
Thr
>WENV180462820
OBYB01081405
146770
Bacillota
TTC
Glu
>WENV180462824
OBYB01088814
10680
Bacillota
GGA
Ser
>WENV180462832
OBYB01103620
235137
Bacillota
TGC
Ala
>WENV180462846
OBYB01104819
338152
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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