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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180463360
OBYC01000668
196621
Bacillota
GTC
Asp
>WENV180463366
OBYC01000682
196621
Bacillota
GTC
Asp
>WENV180463563
OBYC01002679
196621
Bacillota
GTC
Asp
>WENV180463108
OBYC01000210
309417
Bacillota
GGC
Ala
>WENV180463357
OBYC01000656
309417
Bacillota
GGC
Ala
>WENV180463786
OBYC01035126
339904
Bacillota
GCC
Gly
>WENV180463441
OBYC01001009
144612
Bacillota
TCT
Arg
>WENV180463010
OBYC01000094
267649
Bacillota
TAC
Val
>WENV180463170
OBYC01000317
267649
Bacillota
TAC
Val
>WENV180463534
OBYC01002144
267649
Bacillota
TAC
Val
>WENV180463594
OBYC01003721
267649
Bacillota
TAC
Val
>WENV180463805
OBYC01044257
235134
Bacillota
GAA
Phe
>WENV180463741
OBYC01025408
235098
Bacillota
GAC
Val
>WENV180463472
OBYC01001197
235098
Bacillota
GAC
Val
>WENV180462991
OBYC01000082
338152
Bacillota
TTC
Glu
>WENV180463688
OBYC01012465
338544
Bacillota
TGT
Thr
>WENV180463427
OBYC01000946
148239
Bacillota
TCT
Arg
>WENV180463235
OBYC01000396
44854
Bacillota
TGA
Ser
>WENV180463697
OBYC01015256
235154
Bacillota
GTT
Asn
>WENV180463578
OBYC01003089
37071
Bacillota
TGA
Ser
>WENV180463367
OBYC01000682
304022
Bacillota
GCC
Gly
>WENV180463365
OBYC01000682
304022
Bacillota
GCC
Gly
>WENV180463362
OBYC01000668
304022
Bacillota
GCC
Gly
>WENV180463358
OBYC01000668
304022
Bacillota
GCC
Gly
>WENV180463422
OBYC01000946
302150
Bacillota
TAC
Val
>WENV180463213
OBYC01000378
302150
Bacillota
TAC
Val
>WENV180463681
OBYC01011369
246023
Bacillota
TGC
Ala
>WENV180463619
OBYC01005371
307003
Bacillota
TGC
Ala
>WENV180463611
OBYC01004739
338147
Bacillota
CTC
Glu
>WENV180463592
OBYC01003575
338147
Bacillota
CTC
Glu
>WENV180463843
OBYC01068586
235150
Bacillota
TGC
Ala
>WENV180463685
OBYC01011784
235137
Bacillota
TGC
Ala
>WENV180463662
OBYC01009341
340802
Bacillota
TTG
Gln
>WENV180463240
OBYC01000401
340802
Bacillota
TTG
Gln
>WENV180462952
OBYC01000041
340802
Bacillota
TTG
Gln
>WENV180463785
OBYC01035126
235903
Bacillota
TTT
Lys
>WENV180463673
OBYC01010261
341763
Bacillota
CTC
Glu
>WENV180463829
OBYC01067388
144668
Bacillota
GTC
Asp
>WENV180463078
OBYC01000152
429429
Bacillota
CCA
Trp
>WENV180463033
OBYC01000112
429429
Bacillota
CCA
Trp
>WENV180463495
OBYC01001405
429429
Bacillota
CCA
Trp
>WENV180463560
OBYC01002621
313454
Bacillota
GAA
Phe
>WENV180463316
OBYC01000563
313454
Bacillota
GAA
Phe
>WENV180463036
OBYC01000115
313454
Bacillota
GAA
Phe
>WENV180463207
OBYC01000370
41154
Bacillota
TAA
Leu
>WENV180463536
OBYC01002162
44859
Bacillota
AAG
Leu
>WENV180463668
OBYC01009716
11034
Bacillota
GGA
Ser
>WENV180463359
OBYC01000668
235117
Bacillota
TAC
Val
>WENV180463740
OBYC01025291
247057
Bacillota
TGC
Ala
>WENV180463239
OBYC01000401
156937
Bacillota
GTG
His
>WENV180463364
OBYC01000682
235079
Bacillota
GAA
Phe
>WENV180463361
OBYC01000668
235079
Bacillota
GAA
Phe
>WENV180463348
OBYC01000621
149041
Bacillota
GTC
Asp
>WENV180463088
OBYC01000174
149041
Bacillota
GTC
Asp
>WENV180463465
OBYC01001125
338149
Bacillota
CTC
Glu
>WENV180463201
OBYC01000363
338149
Bacillota
CTC
Glu
>WENV180463446
OBYC01001039
245298
Bacillota
CGG
Pro
>WENV180463326
OBYC01000577
37269
Bacillota
TGA
Ser
>WENV180462992
OBYC01000082
287000
Bacillota
GTT
Asn
>WENV180462990
OBYC01000082
287000
Bacillota
GTT
Asn
>WENV180463315
OBYC01000563
169968
Bacillota
CAT
Met
>WENV180463018
OBYC01000098
169968
Bacillota
CAT
Met
>WENV180463122
OBYC01000225
173810
Bacillota
CAT
Met
>WENV180463181
OBYC01000330
162445
Bacillota
CAT
Met
>WENV180463179
OBYC01000330
162445
Bacillota
CAT
Met
>WENV180463680
OBYC01011369
201704
Bacillota
GAT
Ile
>WENV180463124
OBYC01000228
152492
Bacillota
GGG
Pro
>WENV180463082
OBYC01000161
152492
Bacillota
GGG
Pro
>WENV180463421
OBYC01000946
144599
Bacillota
GTC
Asp
>WENV180463212
OBYC01000378
144599
Bacillota
GTC
Asp
>WENV180463268
OBYC01000446
100326
Bacillota
GTA
Tyr
>WENV180463215
OBYC01000378
100326
Bacillota
GTA
Tyr
>WENV180463428
OBYC01000946
144610
Bacillota
GTG
His
>WENV180462951
OBYC01000041
144610
Bacillota
GTG
His
>WENV180463784
OBYC01035126
338548
Bacillota
TTG
Gln
>WENV180463806
OBYC01044257
240017
Bacillota
GCC
Gly
>WENV180463505
OBYC01001509
411547
Bacillota
CTG
Gln
>WENV180463445
OBYC01001039
411547
Bacillota
CTG
Gln
>WENV180463396
OBYC01000789
411547
Bacillota
CTG
Gln
>WENV180463155
OBYC01000290
147684
Bacillota
ACG
Arg
>WENV180463100
OBYC01000197
147684
Bacillota
ACG
Arg
>WENV180463236
OBYC01000396
4624
Bacillota
GCT
Ser
>WENV180463835
OBYC01067774
263765
Bacillota
TAC
Val
>WENV180463834
OBYC01067646
313164
Bacillota
TTT
Lys
>WENV180463663
OBYC01009341
313164
Bacillota
TTT
Lys
>WENV180463261
OBYC01000439
313164
Bacillota
TTT
Lys
>WENV180463564
OBYC01002679
235095
Bacillota
GGT
Thr
>WENV180463554
OBYC01002570
235095
Bacillota
GGT
Thr
>WENV180463378
OBYC01000712
235095
Bacillota
GGT
Thr
>WENV180463374
OBYC01000712
235095
Bacillota
GGT
Thr
>WENV180463346
OBYC01000621
239832
Bacillota
TGT
Thr
>WENV180463090
OBYC01000174
239832
Bacillota
TGT
Thr
>WENV180463238
OBYC01000401
152151
Bacillota
TCT
Arg
>WENV180463483
OBYC01001342
411549
Bacillota
TTG
Gln
>WENV180463447
OBYC01001046
235142
Bacillota
CTT
Lys
>WENV180463515
OBYC01001799
148188
Bacillota
CCG
Arg
>WENV180463444
OBYC01001020
148188
Bacillota
CCG
Arg
>WENV180463747
OBYC01026640
298639
Bacillota
GTT
Asn
>WENV180463369
OBYC01000682
80612
Bacillota
GTA
Tyr
>WENV180463146
OBYC01000272
80612
Bacillota
GTA
Tyr
>WENV180463299
OBYC01000504
256380
Bacillota
>WENV180463639
OBYC01007370
241432
Bacillota
TGT
Thr
>WENV180463413
OBYC01000918
235124
Bacillota
TGG
Pro
>WENV180463765
OBYC01028850
201667
Bacillota
TCT
Arg
>WENV180463385
OBYC01000737
338129
Bacillota
TGT
Thr
>WENV180463707
OBYC01016138
436750
Bacillota
TCC
Gly
>WENV180463627
OBYC01006053
144583
Bacillota
ACG
Arg
>WENV180463660
OBYC01009341
144672
Bacillota
TCT
Arg
>WENV180463152
OBYC01000290
144652
Bacillota
GTC
Asp
>WENV180463811
OBYC01046557
247734
Bacillota
TGC
Ala
>WENV180463376
OBYC01000712
235171
Bacillota
CCA
Trp
>WENV180463549
OBYC01002471
238974
Bacillota
GAA
Phe
>WENV180463270
OBYC01000446
238974
Bacillota
GAA
Phe
>WENV180463217
OBYC01000378
238974
Bacillota
GAA
Phe
>WENV180463529
OBYC01002067
144621
Bacillota
GTT
Asn
>WENV180463466
OBYC01001125
144621
Bacillota
GTT
Asn
>WENV180463202
OBYC01000363
144621
Bacillota
GTT
Asn
>WENV180463107
OBYC01000210
144621
Bacillota
GTT
Asn
>WENV180463841
OBYC01068350
58712
Bacillota
CAG
Leu
>WENV180463379
OBYC01000713
58712
Bacillota
CAG
Leu
>WENV180463571
OBYC01002912
21693
Bacillota
GCT
Ser
>WENV180463607
OBYC01004445
245296
Bacillota
CCC
Gly
>WENV180463842
OBYC01068539
272992
Bacillota
CTT
Lys
>WENV180462950
OBYC01000041
157635
Bacillota
TCT
Arg
>WENV180463721
OBYC01019807
299139
Bacillota
TGC
Ala
>WENV180463480
OBYC01001323
144594
Bacillota
CAC
Val
>WENV180463403
OBYC01000843
144594
Bacillota
CAC
Val
>WENV180463490
OBYC01001390
414486
Bacillota
CCC
Gly
>WENV180463291
OBYC01000482
272488
Bacillota
GAA
Phe
>WENV180463019
OBYC01000098
272488
Bacillota
GAA
Phe
>WENV180463431
OBYC01000946
114075
Bacillota
TAG
Leu
>WENV180463713
OBYC01016980
119513
Bacillota
CAA
Leu
>WENV180463838
OBYC01068066
249259
Bacillota
GCC
Gly
>WENV180463706
OBYC01016138
338207
Bacillota
TTC
Glu
>WENV180463405
OBYC01000875
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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