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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
221 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180513670
OCHB01000011
24650
Bacillota
TAA
Leu
>WENV180514647
OCHB01003764
24650
Bacillota
TAA
Leu
>WENV180514363
OCHB01000944
196621
Bacillota
GTC
Asp
>WENV180514373
OCHB01000956
196621
Bacillota
GTC
Asp
>WENV180514494
OCHB01001429
196621
Bacillota
GTC
Asp
>WENV180514715
OCHB01005821
196621
Bacillota
GTC
Asp
>WENV180514729
OCHB01006206
196621
Bacillota
GTC
Asp
>WENV180514966
OCHB01039509
196621
Bacillota
GTC
Asp
>WENV180514782
OCHB01011453
202812
Bacillota
CAT
Met
>WENV180514287
OCHB01000686
144612
Bacillota
TCT
Arg
>WENV180514295
OCHB01000711
144612
Bacillota
TCT
Arg
>WENV180514831
OCHB01016037
144612
Bacillota
TCT
Arg
>WENV180514030
OCHB01000269
235134
Bacillota
GAA
Phe
>WENV180514881
OCHB01021378
235134
Bacillota
GAA
Phe
>WENV180514602
OCHB01002600
235098
Bacillota
GAC
Val
>WENV180514684
OCHB01004677
235098
Bacillota
GAC
Val
>WENV180514686
OCHB01004714
235098
Bacillota
GAC
Val
>WENV180514734
OCHB01006591
235098
Bacillota
GAC
Val
>WENV180515154
OCHB01131220
235098
Bacillota
GAC
Val
>WENV180514947
OCHB01033965
338152
Bacillota
TTC
Glu
>WENV180513960
OCHB01000193
338152
Bacillota
TTC
Glu
>WENV180513897
OCHB01000130
148239
Bacillota
TCT
Arg
>WENV180514522
OCHB01001579
44854
Bacillota
TGA
Ser
>WENV180514407
OCHB01001061
44854
Bacillota
TGA
Ser
>WENV180514100
OCHB01000370
44854
Bacillota
TGA
Ser
>WENV180514020
OCHB01000262
44854
Bacillota
TGA
Ser
>WENV180514974
OCHB01040894
235154
Bacillota
GTT
Asn
>WENV180515104
OCHB01085495
144577
Bacillota
GAT
Ile
>WENV180513957
OCHB01000192
37071
Bacillota
TGA
Ser
>WENV180514964
OCHB01039509
304022
Bacillota
GCC
Gly
>WENV180514773
OCHB01010644
304022
Bacillota
GCC
Gly
>WENV180514545
OCHB01001673
304022
Bacillota
GCC
Gly
>WENV180514365
OCHB01000944
304022
Bacillota
GCC
Gly
>WENV180514361
OCHB01000944
304022
Bacillota
GCC
Gly
>WENV180515019
OCHB01059138
246023
Bacillota
TGC
Ala
>WENV180514441
OCHB01001152
59312
Bacillota
CAG
Leu
>WENV180513936
OCHB01000165
59312
Bacillota
CAG
Leu
>WENV180514421
OCHB01001086
238910
Bacillota
CTT
Lys
>WENV180514465
OCHB01001323
338147
Bacillota
CTC
Glu
>WENV180514454
OCHB01001243
338147
Bacillota
CTC
Glu
>WENV180514008
OCHB01000248
338147
Bacillota
CTC
Glu
>WENV180514007
OCHB01000248
338147
Bacillota
CTC
Glu
>WENV180514006
OCHB01000248
338147
Bacillota
CTC
Glu
>WENV180513932
OCHB01000162
338147
Bacillota
CTC
Glu
>WENV180514959
OCHB01037449
235150
Bacillota
TGC
Ala
>WENV180513993
OCHB01000238
155273
Bacillota
CAT
Met
>WENV180515050
OCHB01068946
114359
Bacillota
TAG
Leu
>WENV180515005
OCHB01050817
235137
Bacillota
TGC
Ala
>WENV180515089
OCHB01080205
235294
Bacillota
TGC
Ala
>WENV180514609
OCHB01002641
340802
Bacillota
TTG
Gln
>WENV180514103
OCHB01000372
293599
Bacillota
CTT
Lys
>WENV180515051
OCHB01069185
338143
Bacillota
CTC
Glu
>WENV180514233
OCHB01000611
235114
Bacillota
TTT
Lys
>WENV180514118
OCHB01000405
235114
Bacillota
TTT
Lys
>WENV180515152
OCHB01131190
144668
Bacillota
GTC
Asp
>WENV180514968
OCHB01040362
144668
Bacillota
GTC
Asp
>WENV180514507
OCHB01001497
429429
Bacillota
CCA
Trp
>WENV180514442
OCHB01001169
429429
Bacillota
CCA
Trp
>WENV180514395
OCHB01001019
429429
Bacillota
CCA
Trp
>WENV180514351
OCHB01000891
429429
Bacillota
CCA
Trp
>WENV180514179
OCHB01000506
429429
Bacillota
CCA
Trp
>WENV180515158
OCHB01133187
41154
Bacillota
TAA
Leu
>WENV180514705
OCHB01005387
44859
Bacillota
AAG
Leu
>WENV180514610
OCHB01002648
11034
Bacillota
GGA
Ser
>WENV180514382
OCHB01000985
11034
Bacillota
GGA
Ser
>WENV180514381
OCHB01000985
11034
Bacillota
GGA
Ser
>WENV180514358
OCHB01000928
11034
Bacillota
GGA
Ser
>WENV180514965
OCHB01039509
235117
Bacillota
TAC
Val
>WENV180514362
OCHB01000944
235117
Bacillota
TAC
Val
>WENV180514608
OCHB01002641
156937
Bacillota
GTG
His
>WENV180514478
OCHB01001392
274189
Bacillota
TGT
Thr
>WENV180514660
OCHB01003863
235079
Bacillota
GAA
Phe
>WENV180514618
OCHB01002832
235079
Bacillota
GAA
Phe
>WENV180514617
OCHB01002811
235079
Bacillota
GAA
Phe
>WENV180514566
OCHB01001905
235079
Bacillota
GAA
Phe
>WENV180514544
OCHB01001673
235079
Bacillota
GAA
Phe
>WENV180514364
OCHB01000944
235079
Bacillota
GAA
Phe
>WENV180515103
OCHB01085495
235087
Bacillota
TGC
Ala
>WENV180514631
OCHB01003292
173314
Bacillota
GAT
Ile
>WENV180514537
OCHB01001629
338149
Bacillota
CTC
Glu
>WENV180514526
OCHB01001591
338149
Bacillota
CTC
Glu
>WENV180514297
OCHB01000724
338149
Bacillota
CTC
Glu
>WENV180514151
OCHB01000448
338149
Bacillota
CTC
Glu
>WENV180514018
OCHB01000262
338149
Bacillota
CTC
Glu
>WENV180514488
OCHB01001415
271471
Bacillota
GCC
Gly
>WENV180515136
OCHB01114768
144766
Bacillota
CAT
Met
>WENV180514889
OCHB01022196
245298
Bacillota
CGG
Pro
>WENV180514636
OCHB01003510
245298
Bacillota
CGG
Pro
>WENV180514516
OCHB01001557
245298
Bacillota
CGG
Pro
>WENV180514229
OCHB01000603
245298
Bacillota
CGG
Pro
>WENV180514818
OCHB01014935
37269
Bacillota
TGA
Ser
>WENV180514659
OCHB01003813
37269
Bacillota
TGA
Ser
>WENV180514431
OCHB01001102
37269
Bacillota
TGA
Ser
>WENV180514203
OCHB01000560
37269
Bacillota
TGA
Ser
>WENV180514900
OCHB01023239
287000
Bacillota
GTT
Asn
>WENV180514753
OCHB01008501
287000
Bacillota
GTT
Asn
>WENV180514972
OCHB01040362
169968
Bacillota
CAT
Met
>WENV180514894
OCHB01022346
169968
Bacillota
CAT
Met
>WENV180514871
OCHB01020658
413152
Bacillota
TCC
Gly
>WENV180514393
OCHB01001017
173810
Bacillota
CAT
Met
>WENV180514944
OCHB01033525
162445
Bacillota
CAT
Met
>WENV180515018
OCHB01059138
201704
Bacillota
GAT
Ile
>WENV180514561
OCHB01001855
152492
Bacillota
GGG
Pro
>WENV180515062
OCHB01070951
144599
Bacillota
GTC
Asp
>WENV180514035
OCHB01000273
100326
Bacillota
GTA
Tyr
>WENV180513870
OCHB01000104
100326
Bacillota
GTA
Tyr
>WENV180515059
OCHB01070816
144610
Bacillota
GTG
His
>WENV180513898
OCHB01000130
144610
Bacillota
GTG
His
>WENV180514882
OCHB01021378
240017
Bacillota
GCC
Gly
>WENV180514031
OCHB01000269
240017
Bacillota
GCC
Gly
>WENV180513744
OCHB01000046
240017
Bacillota
GCC
Gly
>WENV180514888
OCHB01022196
411547
Bacillota
CTG
Gln
>WENV180514785
OCHB01011509
411547
Bacillota
CTG
Gln
>WENV180514635
OCHB01003510
411547
Bacillota
CTG
Gln
>WENV180514625
OCHB01003197
411547
Bacillota
CTG
Gln
>WENV180514616
OCHB01002803
411547
Bacillota
CTG
Gln
>WENV180514515
OCHB01001557
411547
Bacillota
CTG
Gln
>WENV180514405
OCHB01001046
411547
Bacillota
CTG
Gln
>WENV180514228
OCHB01000603
411547
Bacillota
CTG
Gln
>WENV180514614
OCHB01002724
147684
Bacillota
ACG
Arg
>WENV180514523
OCHB01001579
4624
Bacillota
GCT
Ser
>WENV180514408
OCHB01001061
4624
Bacillota
GCT
Ser
>WENV180514101
OCHB01000370
4624
Bacillota
GCT
Ser
>WENV180514021
OCHB01000262
4624
Bacillota
GCT
Ser
>WENV180514879
OCHB01021378
263765
Bacillota
TAC
Val
>WENV180514485
OCHB01001415
263765
Bacillota
TAC
Val
>WENV180514208
OCHB01000574
263765
Bacillota
TAC
Val
>WENV180514028
OCHB01000269
263765
Bacillota
TAC
Val
>WENV180513743
OCHB01000046
263765
Bacillota
TAC
Val
>WENV180515014
OCHB01053869
412387
Bacillota
GCA
Cys
>WENV180514730
OCHB01006206
235095
Bacillota
GGT
Thr
>WENV180514716
OCHB01005821
235095
Bacillota
GGT
Thr
>WENV180514495
OCHB01001429
235095
Bacillota
GGT
Thr
>WENV180514492
OCHB01001429
235095
Bacillota
GGT
Thr
>WENV180514374
OCHB01000956
235095
Bacillota
GGT
Thr
>WENV180514370
OCHB01000956
235095
Bacillota
GGT
Thr
>WENV180514343
OCHB01000838
235095
Bacillota
GGT
Thr
>WENV180515165
OCHB01133709
239832
Bacillota
TGT
Thr
>WENV180514948
OCHB01034420
198159
Bacillota
CAT
Met
>WENV180514607
OCHB01002641
152151
Bacillota
TCT
Arg
>WENV180514897
OCHB01022673
411549
Bacillota
TTG
Gln
>WENV180514416
OCHB01001074
411549
Bacillota
TTG
Gln
>WENV180514227
OCHB01000603
411549
Bacillota
TTG
Gln
>WENV180514290
OCHB01000703
235142
Bacillota
CTT
Lys
>WENV180514015
OCHB01000256
235142
Bacillota
CTT
Lys
>WENV180514424
OCHB01001086
245386
Bacillota
CCA
Trp
>WENV180515092
OCHB01081940
148188
Bacillota
CCG
Arg
>WENV180514665
OCHB01004164
148188
Bacillota
CCG
Arg
>WENV180514439
OCHB01001137
148188
Bacillota
CCG
Arg
>WENV180515160
OCHB01133205
80612
Bacillota
GTA
Tyr
>WENV180514324
OCHB01000804
80612
Bacillota
GTA
Tyr
>WENV180514844
OCHB01018576
235127
Bacillota
TTT
Lys
>WENV180514501
OCHB01001452
235127
Bacillota
TTT
Lys
>WENV180514498
OCHB01001452
147674
Bacillota
TCT
Arg
>WENV180515168
OCHB01133804
241432
Bacillota
TGT
Thr
>WENV180514670
OCHB01004316
235124
Bacillota
TGG
Pro
>WENV180514661
OCHB01003869
235124
Bacillota
TGG
Pro
>WENV180514587
OCHB01002251
235124
Bacillota
TGG
Pro
>WENV180514434
OCHB01001110
235124
Bacillota
TGG
Pro
>WENV180515008
OCHB01051714
345314
Bacillota
TTG
Gln
>WENV180515123
OCHB01096559
201667
Bacillota
TCT
Arg
>WENV180514578
OCHB01002067
338129
Bacillota
TGT
Thr
>WENV180514534
OCHB01001614
338129
Bacillota
TGT
Thr
>WENV180514460
OCHB01001292
338129
Bacillota
TGT
Thr
>WENV180515124
OCHB01096559
279635
Bacillota
GTG
His
>WENV180515156
OCHB01131710
144583
Bacillota
ACG
Arg
>WENV180514582
OCHB01002204
144583
Bacillota
ACG
Arg
>WENV180514336
OCHB01000831
144583
Bacillota
ACG
Arg
>WENV180514330
OCHB01000824
144583
Bacillota
ACG
Arg
>WENV180514997
OCHB01049629
144652
Bacillota
GTC
Asp
>WENV180514989
OCHB01046782
144652
Bacillota
GTC
Asp
>WENV180514032
OCHB01000273
144652
Bacillota
GTC
Asp
>WENV180514677
OCHB01004559
247734
Bacillota
TGC
Ala
>WENV180514267
OCHB01000657
247734
Bacillota
TGC
Ala
>WENV180514827
OCHB01015769
419877
Bacillota
TCC
Gly
>WENV180514728
OCHB01006206
235171
Bacillota
CCA
Trp
>WENV180514493
OCHB01001429
235171
Bacillota
CCA
Trp
>WENV180514372
OCHB01000956
235171
Bacillota
CCA
Trp
>WENV180514927
OCHB01029329
144621
Bacillota
GTT
Asn
>WENV180514548
OCHB01001683
144621
Bacillota
GTT
Asn
>WENV180514538
OCHB01001629
144621
Bacillota
GTT
Asn
>WENV180514527
OCHB01001591
144621
Bacillota
GTT
Asn
>WENV180514453
OCHB01001242
144621
Bacillota
GTT
Asn
>WENV180514354
OCHB01000908
144621
Bacillota
GTT
Asn
>WENV180514298
OCHB01000724
144621
Bacillota
GTT
Asn
>WENV180514235
OCHB01000613
144621
Bacillota
GTT
Asn
>WENV180514019
OCHB01000262
144621
Bacillota
GTT
Asn
>WENV180514232
OCHB01000611
235113
Bacillota
GAA
Phe
>WENV180513958
OCHB01000192
235113
Bacillota
GAA
Phe
>WENV180514833
OCHB01016037
58712
Bacillota
CAG
Leu
>WENV180514676
OCHB01004539
58712
Bacillota
CAG
Leu
>WENV180514649
OCHB01003784
58712
Bacillota
CAG
Leu
>WENV180514634
OCHB01003502
58712
Bacillota
CAG
Leu
>WENV180514585
OCHB01002224
58712
Bacillota
CAG
Leu
>WENV180514551
OCHB01001723
58712
Bacillota
CAG
Leu
>WENV180514549
OCHB01001704
58712
Bacillota
CAG
Leu
>WENV180514325
OCHB01000804
58712
Bacillota
CAG
Leu
>WENV180514854
OCHB01018949
144762
Bacillota
TCT
Arg
>WENV180514546
OCHB01001673
245296
Bacillota
CCC
Gly
>WENV180514517
OCHB01001561
245296
Bacillota
CCC
Gly
>WENV180514279
OCHB01000666
245296
Bacillota
CCC
Gly
>WENV180515114
OCHB01090135
272992
Bacillota
CTT
Lys
>WENV180514907
OCHB01023832
272992
Bacillota
CTT
Lys
>WENV180514875
OCHB01020907
272992
Bacillota
CTT
Lys
>WENV180514152
OCHB01000448
272992
Bacillota
CTT
Lys
>WENV180514673
OCHB01004387
144594
Bacillota
CAC
Val
>WENV180514600
OCHB01002568
144594
Bacillota
CAC
Val
>WENV180514567
OCHB01001910
144594
Bacillota
CAC
Val
>WENV180514514
OCHB01001553
144594
Bacillota
CAC
Val
>WENV180514326
OCHB01000806
95563
Bacillota
GTA
Tyr
>WENV180514230
OCHB01000611
95563
Bacillota
GTA
Tyr
>WENV180514584
OCHB01002219
414486
Bacillota
CCC
Gly
>WENV180514344
OCHB01000841
272488
Bacillota
GAA
Phe
>WENV180514110
OCHB01000391
272488
Bacillota
GAA
Phe
>WENV180514904
OCHB01023807
114075
Bacillota
TAG
Leu
>WENV180514850
OCHB01018949
338207
Bacillota
TTC
Glu
>WENV180514623
OCHB01003078
338128
Bacillota
TTC
Glu
>WENV180514543
OCHB01001656
338128
Bacillota
TTC
Glu
>WENV180514529
OCHB01001595
338128
Bacillota
TTC
Glu
>WENV180514341
OCHB01000836
338128
Bacillota
TTC
Glu
>WENV180514013
OCHB01000255
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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