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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180990371
ODVN01001123
243647
Bacillota
TTT
Lys
>WENV180991102
ODVN01018629
243647
Bacillota
TTT
Lys
>WENV180991255
ODVN01032902
243647
Bacillota
TTT
Lys
>WENV180991458
ODVN01094192
243647
Bacillota
TTT
Lys
>WENV180990450
ODVN01001410
178679
Bacillota
CAT
Met
>WENV180990391
ODVN01001203
16842
Bacillota
CGA
Ser
>WENV180990078
ODVN01000351
37213
Bacillota
TGA
Ser
>WENV180989693
ODVN01000019
267649
Bacillota
TAC
Val
>WENV180990572
ODVN01002316
267649
Bacillota
TAC
Val
>WENV180991358
ODVN01053669
155040
Bacillota
GAT
Ile
>WENV180991337
ODVN01049036
359540
Bacillota
GTT
Asn
>WENV180991456
ODVN01094027
359540
Bacillota
GTT
Asn
>WENV180991348
ODVN01051008
359540
Bacillota
GTT
Asn
>WENV180991376
ODVN01061378
307003
Bacillota
TGC
Ala
>WENV180991483
ODVN01099888
235150
Bacillota
TGC
Ala
>WENV180991141
ODVN01021337
114359
Bacillota
TAG
Leu
>WENV180991308
ODVN01041615
235137
Bacillota
TGC
Ala
>WENV180991204
ODVN01025848
235137
Bacillota
TGC
Ala
>WENV180991196
ODVN01025236
308424
Bacillota
TTT
Lys
>WENV180990481
ODVN01001595
16834
Bacillota
GCT
Ser
>WENV180990378
ODVN01001158
16834
Bacillota
GCT
Ser
>WENV180990370
ODVN01001123
243646
Bacillota
GTT
Asn
>WENV180990981
ODVN01010882
114002
Bacillota
CAA
Leu
>WENV180990622
ODVN01002896
37437
Bacillota
TAA
Leu
>WENV180990621
ODVN01002886
37437
Bacillota
TAA
Leu
>WENV180990619
ODVN01002858
37437
Bacillota
TAA
Leu
>WENV180991270
ODVN01035689
162028
Bacillota
ACG
Arg
>WENV180991194
ODVN01025236
113951
Bacillota
GTA
Tyr
>WENV180990456
ODVN01001410
113951
Bacillota
GTA
Tyr
>WENV180991420
ODVN01081189
243612
Bacillota
TAC
Val
>WENV180991440
ODVN01090997
144766
Bacillota
CAT
Met
>WENV180991139
ODVN01021337
380750
Bacillota
TGT
Thr
>WENV180991044
ODVN01013684
155089
Bacillota
CAT
Met
>WENV180991215
ODVN01026949
338676
Bacillota
CCG
Arg
>WENV180991431
ODVN01088511
81373
Bacillota
GTA
Tyr
>WENV180991247
ODVN01030886
147135
Bacillota
ACG
Arg
>WENV180991401
ODVN01071920
144599
Bacillota
GTC
Asp
>WENV180990454
ODVN01001410
242848
Bacillota
GAA
Phe
>WENV180990294
ODVN01000799
242848
Bacillota
GAA
Phe
>WENV180991320
ODVN01044169
380077
Bacillota
GCC
Gly
>WENV180990681
ODVN01003330
342895
Bacillota
CAT
Met
>WENV180990174
ODVN01000553
342895
Bacillota
CAT
Met
>WENV180990115
ODVN01000432
342895
Bacillota
CAT
Met
>WENV180991120
ODVN01020460
18852
Bacillota
GCT
Ser
>WENV180991323
ODVN01044852
194150
Bacillota
TGG
Pro
>WENV180990581
ODVN01002450
185292
Bacillota
ACG
Arg
>WENV180990440
ODVN01001375
235701
Bacillota
TTT
Lys
>WENV180991468
ODVN01099319
154711
Bacillota
TGG
Pro
>WENV180990218
ODVN01000607
154711
Bacillota
TGG
Pro
>WENV180991140
ODVN01021337
101142
Bacillota
GTA
Tyr
>WENV180990538
ODVN01002086
237846
Bacillota
GCC
Gly
>WENV180991461
ODVN01097156
235197
Bacillota
GTC
Asp
>WENV180990138
ODVN01000462
235197
Bacillota
GTC
Asp
>WENV180991100
ODVN01018629
368876
Bacillota
GCC
Gly
>WENV180990612
ODVN01002748
368876
Bacillota
GCC
Gly
>WENV180990369
ODVN01001123
368876
Bacillota
GCC
Gly
>WENV180990140
ODVN01000462
368876
Bacillota
GCC
Gly
>WENV180991354
ODVN01052377
84171
Bacillota
GAG
Leu
>WENV180990202
ODVN01000600
298620
Bacillota
CAT
Met
>WENV180991484
ODVN01099891
388132
Bacillota
TTC
Glu
>WENV180991463
ODVN01098938
235288
Bacillota
TAC
Val
>WENV180991137
ODVN01021337
235288
Bacillota
TAC
Val
>WENV180991287
ODVN01036927
163753
Bacillota
TGG
Pro
>WENV180991374
ODVN01059854
241526
Bacillota
CTT
Lys
>WENV180990207
ODVN01000607
157838
Bacillota
GTC
Asp
>WENV180990036
ODVN01000295
157838
Bacillota
GTC
Asp
>WENV180990438
ODVN01001375
243613
Bacillota
GTG
His
>WENV180990823
ODVN01005646
144672
Bacillota
TCT
Arg
>WENV180991406
ODVN01073838
235292
Bacillota
CCA
Trp
>WENV180991277
ODVN01036379
152491
Bacillota
CAT
Met
>WENV180991457
ODVN01094057
199895
Bacillota
GTC
Asp
>WENV180991138
ODVN01021337
199895
Bacillota
GTC
Asp
>WENV180990113
ODVN01000409
144762
Bacillota
TCT
Arg
>WENV180990893
ODVN01007842
194064
Bacillota
GAT
Ile
>WENV180991273
ODVN01036379
273029
Bacillota
TGT
Thr
>WENV180989649
ODVN01000007
273029
Bacillota
TGT
Thr
>WENV180991276
ODVN01036379
281472
Bacillota
GGT
Thr
>WENV180991325
ODVN01044852
178024
Bacillota
TCT
Arg
>WENV180991063
ODVN01014874
413657
Bacillota
CCC
Gly
>WENV180990975
ODVN01010409
272488
Bacillota
GAA
Phe
>WENV180991355
ODVN01052377
81598
Bacillota
CAG
Leu
>WENV180991228
ODVN01029085
384950
Bacillota
GCC
Gly
>WENV180991182
ODVN01024549
287034
Bacillota
GTT
Asn
>WENV180991101
ODVN01018629
287034
Bacillota
GTT
Asn
>WENV180990613
ODVN01002748
287034
Bacillota
GTT
Asn
>WENV180990439
ODVN01001375
343027
Bacillota
TTG
Gln
>WENV180990528
ODVN01002011
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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