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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181137148
OEGJ01000464
267632
Actinomycetota
GTT
Asn
>WENV181137961
OEGJ01055840
267632
Actinomycetota
GTT
Asn
>WENV181137405
OEGJ01003158
235615
Actinomycetota
TGC
Ala
>WENV181137188
OEGJ01000630
240126
Actinomycetota
GTG
His
>WENV181137604
OEGJ01008614
240126
Actinomycetota
GTG
His
>WENV181138055
OEGJ01088695
345178
Actinomycetota
CTG
Gln
>WENV181137011
OEGJ01000027
235606
Actinomycetota
GGT
Thr
>WENV181137644
OEGJ01011276
246840
Actinomycetota
CAC
Val
>WENV181138134
OEGJ01125000
361079
Actinomycetota
CTG
Gln
>WENV181137684
OEGJ01013701
340959
Actinomycetota
GTT
Asn
>WENV181137688
OEGJ01014348
158373
Actinomycetota
GGG
Pro
>WENV181138192
OEGJ01164502
149272
Actinomycetota
TTT
Lys
>WENV181137524
OEGJ01005865
418439
Actinomycetota
TCC
Gly
>WENV181138098
OEGJ01106539
235734
Actinomycetota
>WENV181137147
OEGJ01000464
145272
Actinomycetota
CAT
Met
>WENV181137342
OEGJ01002053
341846
Actinomycetota
TCC
Gly
>WENV181137965
OEGJ01056271
84037
Actinomycetota
CAG
Leu
>WENV181137289
OEGJ01001453
235610
Actinomycetota
TGT
Thr
>WENV181137589
OEGJ01007653
412871
Actinomycetota
GCA
Cys
>WENV181137370
OEGJ01002281
338389
Actinomycetota
CAC
Val
>WENV181137179
OEGJ01000589
338389
Actinomycetota
CAC
Val
>WENV181137783
OEGJ01024911
235663
Actinomycetota
TTT
Lys
>WENV181137139
OEGJ01000397
235663
Actinomycetota
TTT
Lys
>WENV181137773
OEGJ01023764
240122
Actinomycetota
TGT
Thr
>WENV181137404
OEGJ01003158
145052
Actinomycetota
GAT
Ile
>WENV181137459
OEGJ01004295
241627
Actinomycetota
>WENV181137012
OEGJ01000027
338474
Actinomycetota
CAT
Met
>WENV181138039
OEGJ01083830
254819
Actinomycetota
CTC
Glu
>WENV181138038
OEGJ01083830
254819
Actinomycetota
CTC
Glu
>WENV181138036
OEGJ01082647
246789
Actinomycetota
CCT
Arg
>WENV181138099
OEGJ01106539
411803
Actinomycetota
GCA
Cys
>WENV181137243
OEGJ01001005
16591
Actinomycetota
GAG
Leu
>WENV181137426
OEGJ01003539
149271
Actinomycetota
CAT
Met
>WENV181137488
OEGJ01004885
44930
Actinomycetota
GGA
Ser
>WENV181137295
OEGJ01001488
239204
Actinomycetota
CTT
Lys
>WENV181137294
OEGJ01001488
239204
Actinomycetota
CTT
Lys
>WENV181137843
OEGJ01034798
155366
Actinomycetota
GAA
Phe
>WENV181137394
OEGJ01002943
96366
Actinomycetota
TAG
Leu
>WENV181137305
OEGJ01001590
96366
Actinomycetota
TAG
Leu
>WENV181137158
OEGJ01000507
235662
Actinomycetota
TGT
Thr
>WENV181137472
OEGJ01004583
246807
Actinomycetota
TGC
Ala
>WENV181137745
OEGJ01020179
246791
Actinomycetota
TCT
Arg
>WENV181137144
OEGJ01000453
37093
Actinomycetota
GAG
Leu
>WENV181137939
OEGJ01047507
23975
Actinomycetota
GCT
Ser
>WENV181137899
OEGJ01040825
23975
Actinomycetota
GCT
Ser
>WENV181137856
OEGJ01036135
23975
Actinomycetota
GCT
Ser
>WENV181137838
OEGJ01033752
23975
Actinomycetota
GCT
Ser
>WENV181137013
OEGJ01000027
250703
Actinomycetota
CCA
Trp
>WENV181138106
OEGJ01110347
277211
Actinomycetota
TTC
Glu
>WENV181138124
OEGJ01118614
121559
Actinomycetota
>WENV181137155
OEGJ01000486
148467
Actinomycetota
CAT
Met
>WENV181137996
OEGJ01067082
246299
Actinomycetota
CTT
Lys
>WENV181137304
OEGJ01001588
411740
Actinomycetota
CCC
Gly
>WENV181137070
OEGJ01000179
411740
Actinomycetota
CCC
Gly
>WENV181137044
OEGJ01000063
148463
Actinomycetota
TAA
Leu
>WENV181137442
OEGJ01003965
363051
Actinomycetota
CTG
Gln
>WENV181137763
OEGJ01022408
246222
Actinomycetota
CCG
Arg
>WENV181138061
OEGJ01090078
411682
Actinomycetota
GCA
Cys
>WENV181137125
OEGJ01000333
411682
Actinomycetota
GCA
Cys
>WENV181137682
OEGJ01013299
260823
Actinomycetota
TGC
Ala
>WENV181138231
OEGJ01182965
37359
Actinomycetota
>WENV181137798
OEGJ01027650
45767
Actinomycetota
GGA
Ser
>WENV181137859
OEGJ01036572
152190
Actinomycetota
GAT
Ile
>WENV181137681
OEGJ01013299
152190
Actinomycetota
GAT
Ile
>WENV181138247
OEGJ01186384
280137
Actinomycetota
CTT
Lys
>WENV181137791
OEGJ01026147
280137
Actinomycetota
CTT
Lys
>WENV181137784
OEGJ01025066
240123
Actinomycetota
TAC
Val
>WENV181138172
OEGJ01144605
345027
Actinomycetota
GTT
Asn
>WENV181137938
OEGJ01047369
48036
Actinomycetota
CGA
Ser
>WENV181138135
OEGJ01125000
240121
Actinomycetota
CTC
Glu
>WENV181137591
OEGJ01007719
287977
Actinomycetota
GTG
His
>WENV181138232
OEGJ01184192
149269
Actinomycetota
TGG
Pro
>WENV181137117
OEGJ01000300
58781
Actinomycetota
CAG
Leu
>WENV181137758
OEGJ01021515
340958
Actinomycetota
TTG
Gln
>WENV181137151
OEGJ01000470
235613
Actinomycetota
GAA
Phe
>WENV181137358
OEGJ01002219
145085
Actinomycetota
CAA
Leu
>WENV181137757
OEGJ01021506
246806
Actinomycetota
TGT
Thr
>WENV181137532
OEGJ01006275
293092
Actinomycetota
CTC
Glu
>WENV181137421
OEGJ01003479
59716
Actinomycetota
CAG
Leu
>WENV181138009
OEGJ01072674
153915
Actinomycetota
ACG
Arg
>WENV181137240
OEGJ01000968
241612
Actinomycetota
CTT
Lys
>WENV181137697
OEGJ01015391
432565
Actinomycetota
TCC
Gly
>WENV181138046
OEGJ01085723
246365
Actinomycetota
ACG
Arg
>WENV181137049
OEGJ01000081
280065
Actinomycetota
CGT
Thr
>WENV181137071
OEGJ01000191
243424
Actinomycetota
TAC
Val
>WENV181137402
OEGJ01003098
254820
Actinomycetota
TAC
Val
>WENV181137206
OEGJ01000744
235603
Actinomycetota
CCG
Arg
>WENV181138194
OEGJ01166495
37358
Actinomycetota
TGA
Ser
>WENV181137781
OEGJ01024407
24777
Actinomycetota
GCT
Ser
>WENV181137375
OEGJ01002350
240124
Actinomycetota
CGT
Thr
>WENV181137999
OEGJ01068744
3306
Actinomycetota
TAT
Ile
>WENV181137471
OEGJ01004576
235604
Actinomycetota
CCT
Arg
>WENV181137025
OEGJ01000037
300845
Actinomycetota
CCT
Arg
>WENV181137448
OEGJ01004103
235768
Actinomycetota
CGT
Thr
>WENV181138206
OEGJ01172803
388111
Actinomycetota
>WENV181138180
OEGJ01150748
155332
Actinomycetota
TAA
Leu
>WENV181137955
OEGJ01054462
345416
Actinomycetota
CTG
Gln
>WENV181137518
OEGJ01005569
154637
Actinomycetota
CAA
Leu
>WENV181137384
OEGJ01002503
285954
Actinomycetota
>WENV181137509
OEGJ01005335
235614
Actinomycetota
TAC
Val
>WENV181138136
OEGJ01125648
246800
Actinomycetota
CAT
Met
>WENV181137554
OEGJ01006573
412870
Actinomycetota
TCC
Gly
>WENV181137468
OEGJ01004508
16836
Actinomycetota
CGA
Ser
>WENV181137962
OEGJ01055840
155350
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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