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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181225456
OFDI01002186
45772
Euryarchaeota
GAG
Leu
>WENV181225370
OFDI01000401
45249
Euryarchaeota
TAG
Leu
>WENV181225299
OFDI01000033
45250
Euryarchaeota
GAG
Leu
>WENV181225390
OFDI01000654
238515
Euryarchaeota
TGC
Ala
>WENV181225448
OFDI01001819
37543
Euryarchaeota
GGA
Ser
>WENV181225360
OFDI01000393
127158
Euryarchaeota
GAT
Ile
>WENV181225402
OFDI01000929
151983
Euryarchaeota
GAC
Val
>WENV181225381
OFDI01000569
127155
Euryarchaeota
TCT
Arg
>WENV181225539
OFDI01006638
127815
Euryarchaeota
GTC
Asp
>WENV181225449
OFDI01001826
243045
Euryarchaeota
TGC
Ala
>WENV181225325
OFDI01000118
147790
Euryarchaeota
GGC
Ala
>WENV181225459
OFDI01002213
151982
Euryarchaeota
GGC
Ala
>WENV181225372
OFDI01000429
147780
Euryarchaeota
TGT
Thr
>WENV181225424
OFDI01001296
151978
Euryarchaeota
GGG
Pro
>WENV181225578
OFDI01010221
243046
Euryarchaeota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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