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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183747828
PPFU01000096
338622
Alphaproteobacteria
GTT
Asn
>WENV183747837
PPFU01000429
369678
Alphaproteobacteria
GGT
Thr
>WENV183747842
PPFU01000519
377852
Alphaproteobacteria
TGT
Thr
>WENV183747843
PPFU01000578
369678
Alphaproteobacteria
GGT
Thr
>WENV183747859
PPFU01001018
60367
Alphaproteobacteria
CAG
Leu
>WENV183747919
PPFU01002953
236004
Alphaproteobacteria
TTT
Lys
>WENV183747953
PPFU01003831
159427
Alphaproteobacteria
GTG
His
>WENV183748011
PPFU01007012
238010
Alphaproteobacteria
TTT
Lys
>WENV183748052
PPFU01008791
426627
Alphaproteobacteria
TCC
Gly
>WENV183748145
PPFU01015271
339606
Alphaproteobacteria
>WENV183748158
PPFU01016094
16408
Alphaproteobacteria
GGA
Ser
>WENV183748171
PPFU01016719
23743
Alphaproteobacteria
GCT
Ser
>WENV183748176
PPFU01016954
340106
Alphaproteobacteria
GCC
Gly
>WENV183748190
PPFU01017682
284043
Alphaproteobacteria
CGT
Thr
>WENV183748219
PPFU01020376
174413
Alphaproteobacteria
CAT
Met
>WENV183748233
PPFU01020914
148083
Alphaproteobacteria
ACG
Arg
>WENV183748253
PPFU01022455
338282
Alphaproteobacteria
GTT
Asn
>WENV183748309
PPFU01027680
113767
Alphaproteobacteria
>WENV183748345
PPFU01029761
80917
Alphaproteobacteria
CAG
Leu
>WENV183748384
PPFU01034101
147286
Alphaproteobacteria
CGG
Pro
>WENV183748440
PPFU01039496
307050
Alphaproteobacteria
GGC
Ala
>WENV183748448
PPFU01040779
147334
Alphaproteobacteria
CAT
Met
>WENV183748478
PPFU01042863
146875
Alphaproteobacteria
GTG
His
>WENV183748501
PPFU01046224
144891
Alphaproteobacteria
CAT
Met
>WENV183748567
PPFU01053472
23648
Alphaproteobacteria
CGA
Ser
>WENV183748596
PPFU01057931
237196
Alphaproteobacteria
CGT
Thr
>WENV183748644
PPFU01063469
303842
Alphaproteobacteria
TAC
Val
>WENV183748656
PPFU01065146
147083
Alphaproteobacteria
GGG
Pro
>WENV183748732
PPFU01073712
382584
Alphaproteobacteria
CAC
Val
>WENV183748779
PPFU01079777
383873
Alphaproteobacteria
>WENV183748913
PPFU01096766
59164
Alphaproteobacteria
GAG
Leu
>WENV183749107
PPFU01120416
412917
Alphaproteobacteria
TCC
Gly
>WENV183749120
PPFU01122172
147087
Alphaproteobacteria
GTG
His
>WENV183749205
PPFU01134529
174413
Alphaproteobacteria
CAT
Met
>WENV183749249
PPFU01141936
377327
Alphaproteobacteria
GCC
Gly
>WENV183749263
PPFU01144170
338282
Alphaproteobacteria
GTT
Asn
>WENV183749274
PPFU01145454
191695
Alphaproteobacteria
CCT
Arg
>WENV183749279
PPFU01146319
412281
Alphaproteobacteria
CTG
Gln
>WENV183749321
PPFU01149965
23627
Alphaproteobacteria
GGA
Ser
>WENV183749348
PPFU01154066
426627
Alphaproteobacteria
TCC
Gly
>WENV183749353
PPFU01155756
96061
Alphaproteobacteria
CAA
Leu
>WENV183749400
PPFU01164873
145688
Alphaproteobacteria
TCT
Arg
>WENV183749482
PPFU01175148
147877
Alphaproteobacteria
GTG
His
>WENV183749492
PPFU01176797
95928
Alphaproteobacteria
TAG
Leu
>WENV183749493
PPFU01176869
413198
Alphaproteobacteria
TCC
Gly
>WENV183749501
PPFU01177161
154579
Alphaproteobacteria
GTG
His
>WENV183749517
PPFU01178528
412798
Alphaproteobacteria
CTG
Gln
>WENV183749565
PPFU01185893
383873
Alphaproteobacteria
>WENV183749595
PPFU01190125
235427
Alphaproteobacteria
CCA
Trp
>WENV183749597
PPFU01190201
284043
Alphaproteobacteria
CGT
Thr
>WENV183749602
PPFU01190446
95928
Alphaproteobacteria
TAG
Leu
>WENV183749622
PPFU01192224
23468
Alphaproteobacteria
GCT
Ser
>WENV183749654
PPFU01196893
385404
Alphaproteobacteria
CTC
Glu
>WENV183749743
PPFU01207084
339724
Alphaproteobacteria
TTG
Gln
>WENV183749753
PPFU01209249
243803
Alphaproteobacteria
CAT
Met
>WENV183749850
PPFU01221394
29895
Alphaproteobacteria
TGA
Ser
>WENV183749918
PPFU01231719
249907
Alphaproteobacteria
CGC
Ala
>WENV183749921
PPFU01232547
339723
Alphaproteobacteria
>WENV183749928
PPFU01233424
145208
Alphaproteobacteria
CAT
Met
>WENV183749943
PPFU01236455
208397
Alphaproteobacteria
GAT
Ile
>WENV183749962
PPFU01238209
377327
Alphaproteobacteria
GCC
Gly
>WENV183749964
PPFU01238352
151733
Alphaproteobacteria
GGG
Pro
>WENV183750050
PPFU01251986
147287
Alphaproteobacteria
TGG
Pro
>WENV183750119
PPFU01259659
185767
Alphaproteobacteria
CCG
Arg
>WENV183750155
PPFU01264431
369678
Alphaproteobacteria
GGT
Thr
>WENV183750176
PPFU01266721
254524
Alphaproteobacteria
TAC
Val
>WENV183750190
PPFU01269390
113767
Alphaproteobacteria
>WENV183750193
PPFU01270110
237493
Alphaproteobacteria
CCA
Trp
>WENV183750206
PPFU01271915
237489
Alphaproteobacteria
CAT
Met
>WENV183750252
PPFU01276448
95928
Alphaproteobacteria
TAG
Leu
>WENV183750300
PPFU01283028
342876
Alphaproteobacteria
GAC
Val
>WENV183750339
PPFU01289125
30581
Alphaproteobacteria
GGA
Ser
>WENV183750365
PPFU01293080
412281
Alphaproteobacteria
CTG
Gln
>WENV183750400
PPFU01297002
366499
Alphaproteobacteria
GGT
Thr
>WENV183750431
PPFU01302865
412281
Alphaproteobacteria
CTG
Gln
>WENV183750478
PPFU01310041
155663
Alphaproteobacteria
CCG
Arg
>WENV183750494
PPFU01312118
339725
Alphaproteobacteria
GAA
Phe
>WENV183750516
PPFU01315269
338760
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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