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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
170 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183737865
PJUD01041796
781234
Bacteroidota
GCA
Cys
>WENV183736933
PJUD01000106
458736
Bacteroidota
GCC
Gly
>WENV183736817
PJUD01000044
229235
Bacteroidota
CAA
Leu
>WENV183738125
PJUD01087418
659854
Bacteroidota
GGT
Thr
>WENV183736820
PJUD01000045
273592
Bacteroidota
TGT
Thr
>WENV183737376
PJUD01005215
779586
Bacteroidota
GCA
Cys
>WENV183737332
PJUD01003869
779586
Bacteroidota
GCA
Cys
>WENV183737775
PJUD01032142
274896
Bacteroidota
GTC
Asp
>WENV183736818
PJUD01000045
452637
Bacteroidota
TCC
Gly
>WENV183736819
PJUD01000045
452637
Bacteroidota
TCC
Gly
>WENV183737047
PJUD01000302
452637
Bacteroidota
TCC
Gly
>WENV183737048
PJUD01000302
452637
Bacteroidota
TCC
Gly
>WENV183738443
PJUD01205332
452637
Bacteroidota
TCC
Gly
>WENV183738444
PJUD01205332
452637
Bacteroidota
TCC
Gly
>WENV183738442
PJUD01205131
456396
Bacteroidota
CAT
Met
>WENV183738441
PJUD01205131
456396
Bacteroidota
CAT
Met
>WENV183738438
PJUD01205032
456396
Bacteroidota
CAT
Met
>WENV183736852
PJUD01000058
456396
Bacteroidota
CAT
Met
>WENV183736853
PJUD01000058
456396
Bacteroidota
CAT
Met
>WENV183736854
PJUD01000058
456396
Bacteroidota
CAT
Met
>WENV183736886
PJUD01000079
456396
Bacteroidota
CAT
Met
>WENV183736887
PJUD01000079
456396
Bacteroidota
CAT
Met
>WENV183738290
PJUD01150977
456396
Bacteroidota
CAT
Met
>WENV183738291
PJUD01150977
456396
Bacteroidota
CAT
Met
>WENV183738320
PJUD01161892
456396
Bacteroidota
CAT
Met
>WENV183738437
PJUD01205032
456396
Bacteroidota
CAT
Met
>WENV183737164
PJUD01000770
452308
Bacteroidota
GCC
Gly
>WENV183736867
PJUD01000066
243543
Bacteroidota
TAC
Val
>WENV183736865
PJUD01000066
243543
Bacteroidota
TAC
Val
>WENV183736838
PJUD01000053
243543
Bacteroidota
TAC
Val
>WENV183736837
PJUD01000053
243543
Bacteroidota
TAC
Val
>WENV183736950
PJUD01000121
463723
Bacteroidota
TTT
Lys
>WENV183736951
PJUD01000121
463723
Bacteroidota
TTT
Lys
>WENV183736953
PJUD01000121
463723
Bacteroidota
TTT
Lys
>WENV183736823
PJUD01000045
780177
Bacteroidota
CCA
Trp
>WENV183738429
PJUD01204724
293745
Bacteroidota
GAT
Ile
>WENV183738434
PJUD01204985
293745
Bacteroidota
GAT
Ile
>WENV183738439
PJUD01205052
293745
Bacteroidota
GAT
Ile
>WENV183738446
PJUD01205597
293745
Bacteroidota
GAT
Ile
>WENV183737041
PJUD01000291
653934
Bacteroidota
TTC
Glu
>WENV183737484
PJUD01010233
653934
Bacteroidota
TTC
Glu
>WENV183737485
PJUD01010233
653934
Bacteroidota
TTC
Glu
>WENV183737167
PJUD01000808
271385
Bacteroidota
CAT
Met
>WENV183737526
PJUD01013082
271385
Bacteroidota
CAT
Met
>WENV183738311
PJUD01158852
457188
Bacteroidota
GCC
Gly
>WENV183737578
PJUD01016140
241779
Bacteroidota
TAC
Val
>WENV183738254
PJUD01137945
677628
Bacteroidota
CCT
Arg
>WENV183737490
PJUD01010554
454955
Bacteroidota
TGT
Thr
>WENV183737493
PJUD01010642
454955
Bacteroidota
TGT
Thr
>WENV183738210
PJUD01121459
87416
Bacteroidota
TGA
Ser
>WENV183738051
PJUD01073355
87416
Bacteroidota
TGA
Ser
>WENV183737016
PJUD01000223
87416
Bacteroidota
TGA
Ser
>WENV183736873
PJUD01000070
87416
Bacteroidota
TGA
Ser
>WENV183736872
PJUD01000070
87416
Bacteroidota
TGA
Ser
>WENV183736848
PJUD01000057
87416
Bacteroidota
TGA
Ser
>WENV183736770
PJUD01000020
87416
Bacteroidota
TGA
Ser
>WENV183736765
PJUD01000018
87417
Bacteroidota
TAA
Leu
>WENV183737277
PJUD01002648
87417
Bacteroidota
TAA
Leu
>WENV183737464
PJUD01008961
87417
Bacteroidota
TAA
Leu
>WENV183738156
PJUD01095952
275277
Bacteroidota
TGT
Thr
>WENV183736972
PJUD01000139
277302
Bacteroidota
TCT
Arg
>WENV183738335
PJUD01165160
277302
Bacteroidota
TCT
Arg
>WENV183737057
PJUD01000316
243544
Bacteroidota
TAC
Val
>WENV183736866
PJUD01000066
243544
Bacteroidota
TAC
Val
>WENV183738445
PJUD01205365
180717
Bacteroidota
TAG
Leu
>WENV183737737
PJUD01027044
180717
Bacteroidota
TAG
Leu
>WENV183736903
PJUD01000090
180717
Bacteroidota
TAG
Leu
>WENV183736888
PJUD01000080
180717
Bacteroidota
TAG
Leu
>WENV183736815
PJUD01000042
180717
Bacteroidota
TAG
Leu
>WENV183736758
PJUD01000016
180717
Bacteroidota
TAG
Leu
>WENV183738212
PJUD01123710
780605
Bacteroidota
CCA
Trp
>WENV183738021
PJUD01068029
780605
Bacteroidota
CCA
Trp
>WENV183737013
PJUD01000216
241622
Bacteroidota
TAC
Val
>WENV183737343
PJUD01004255
241622
Bacteroidota
TAC
Val
>WENV183737344
PJUD01004255
241622
Bacteroidota
TAC
Val
>WENV183738192
PJUD01112872
241622
Bacteroidota
TAC
Val
>WENV183737663
PJUD01020517
462022
Bacteroidota
GAA
Phe
>WENV183736744
PJUD01000011
457377
Bacteroidota
CAT
Met
>WENV183736936
PJUD01000106
277303
Bacteroidota
TGT
Thr
>WENV183736937
PJUD01000106
277303
Bacteroidota
TGT
Thr
>WENV183736944
PJUD01000113
274962
Bacteroidota
GTG
His
>WENV183736945
PJUD01000113
274962
Bacteroidota
GTG
His
>WENV183736929
PJUD01000105
240996
Bacteroidota
TGG
Pro
>WENV183736930
PJUD01000105
240996
Bacteroidota
TGG
Pro
>WENV183736971
PJUD01000139
240996
Bacteroidota
TGG
Pro
>WENV183738334
PJUD01165160
240996
Bacteroidota
TGG
Pro
>WENV183738149
PJUD01092193
781146
Bacteroidota
GCA
Cys
>WENV183736836
PJUD01000053
454410
Bacteroidota
TTT
Lys
>WENV183737053
PJUD01000308
454410
Bacteroidota
TTT
Lys
>WENV183737921
PJUD01051925
454410
Bacteroidota
TTT
Lys
>WENV183736850
PJUD01000057
228614
Bacteroidota
CAA
Leu
>WENV183736766
PJUD01000018
228614
Bacteroidota
CAA
Leu
>WENV183736771
PJUD01000020
228614
Bacteroidota
CAA
Leu
>WENV183736805
PJUD01000036
228614
Bacteroidota
CAA
Leu
>WENV183736743
PJUD01000011
47148
Bacteroidota
GGA
Ser
>WENV183738337
PJUD01165829
275135
Bacteroidota
TGG
Pro
>WENV183737701
PJUD01022891
275135
Bacteroidota
TGG
Pro
>WENV183737648
PJUD01020081
275135
Bacteroidota
TGG
Pro
>WENV183737563
PJUD01015191
275135
Bacteroidota
TGG
Pro
>WENV183737550
PJUD01014638
275135
Bacteroidota
TGG
Pro
>WENV183737228
PJUD01001411
275135
Bacteroidota
TGG
Pro
>WENV183737227
PJUD01001411
275135
Bacteroidota
TGG
Pro
>WENV183737226
PJUD01001411
275135
Bacteroidota
TGG
Pro
>WENV183737171
PJUD01000880
275135
Bacteroidota
TGG
Pro
>WENV183737159
PJUD01000732
275135
Bacteroidota
TGG
Pro
>WENV183737079
PJUD01000359
275135
Bacteroidota
TGG
Pro
>WENV183737078
PJUD01000359
275135
Bacteroidota
TGG
Pro
>WENV183736762
PJUD01000017
275135
Bacteroidota
TGG
Pro
>WENV183736769
PJUD01000019
275135
Bacteroidota
TGG
Pro
>WENV183737077
PJUD01000359
275135
Bacteroidota
TGG
Pro
>WENV183737589
PJUD01017294
452303
Bacteroidota
GAA
Phe
>WENV183737588
PJUD01017294
452303
Bacteroidota
GAA
Phe
>WENV183737472
PJUD01009823
452303
Bacteroidota
GAA
Phe
>WENV183737100
PJUD01000443
452303
Bacteroidota
GAA
Phe
>WENV183737090
PJUD01000396
452303
Bacteroidota
GAA
Phe
>WENV183736760
PJUD01000016
452303
Bacteroidota
GAA
Phe
>WENV183736759
PJUD01000016
452303
Bacteroidota
GAA
Phe
>WENV183736864
PJUD01000062
273589
Bacteroidota
CAT
Met
>WENV183737773
PJUD01031866
273589
Bacteroidota
CAT
Met
>WENV183738112
PJUD01084731
273589
Bacteroidota
CAT
Met
>WENV183736962
PJUD01000134
655813
Bacteroidota
GGT
Thr
>WENV183738364
PJUD01177031
655813
Bacteroidota
GGT
Thr
>WENV183738398
PJUD01188300
655813
Bacteroidota
GGT
Thr
>WENV183736961
PJUD01000134
454407
Bacteroidota
TCC
Gly
>WENV183737020
PJUD01000243
454407
Bacteroidota
TCC
Gly
>WENV183738124
PJUD01087418
454407
Bacteroidota
TCC
Gly
>WENV183738363
PJUD01177031
454407
Bacteroidota
TCC
Gly
>WENV183736928
PJUD01000105
452740
Bacteroidota
GAA
Phe
>WENV183736927
PJUD01000105
452740
Bacteroidota
GAA
Phe
>WENV183736926
PJUD01000105
452740
Bacteroidota
GAA
Phe
>WENV183736925
PJUD01000105
452740
Bacteroidota
GAA
Phe
>WENV183736844
PJUD01000054
460269
Bacteroidota
CAT
Met
>WENV183736843
PJUD01000054
460269
Bacteroidota
CAT
Met
>WENV183736931
PJUD01000106
276305
Bacteroidota
CAT
Met
>WENV183737025
PJUD01000248
477047
Bacteroidota
TTT
Lys
>WENV183737015
PJUD01000223
477047
Bacteroidota
TTT
Lys
>WENV183736803
PJUD01000035
477047
Bacteroidota
TTT
Lys
>WENV183736847
PJUD01000057
275139
Bacteroidota
GTG
His
>WENV183736846
PJUD01000057
275139
Bacteroidota
GTG
His
>WENV183736773
PJUD01000020
275139
Bacteroidota
GTG
His
>WENV183736772
PJUD01000020
275139
Bacteroidota
GTG
His
>WENV183738224
PJUD01126120
241213
Bacteroidota
TGG
Pro
>WENV183737177
PJUD01001059
275134
Bacteroidota
CAT
Met
>WENV183737176
PJUD01001059
275134
Bacteroidota
CAT
Met
>WENV183737166
PJUD01000808
275134
Bacteroidota
CAT
Met
>WENV183736959
PJUD01000134
452312
Bacteroidota
TGT
Thr
>WENV183736802
PJUD01000034
452312
Bacteroidota
TGT
Thr
>WENV183736801
PJUD01000034
452312
Bacteroidota
TGT
Thr
>WENV183736800
PJUD01000034
452312
Bacteroidota
TGT
Thr
>WENV183738250
PJUD01136562
275945
Bacteroidota
GTT
Asn
>WENV183737497
PJUD01010936
275945
Bacteroidota
GTT
Asn
>WENV183737679
PJUD01021432
180844
Bacteroidota
TAG
Leu
>WENV183737715
PJUD01024212
275132
Bacteroidota
GTT
Asn
>WENV183737714
PJUD01024212
275132
Bacteroidota
GTT
Asn
>WENV183737005
PJUD01000207
275132
Bacteroidota
GTT
Asn
>WENV183737004
PJUD01000207
275132
Bacteroidota
GTT
Asn
>WENV183737003
PJUD01000207
275132
Bacteroidota
GTT
Asn
>WENV183736985
PJUD01000175
275132
Bacteroidota
GTT
Asn
>WENV183736983
PJUD01000175
275132
Bacteroidota
GTT
Asn
>WENV183736857
PJUD01000059
456397
Bacteroidota
CTT
Lys
>WENV183736965
PJUD01000136
456397
Bacteroidota
CTT
Lys
>WENV183737772
PJUD01031678
275676
Bacteroidota
CAT
Met
>WENV183736835
PJUD01000052
87640
Bacteroidota
TGA
Ser
>WENV183737060
PJUD01000321
87640
Bacteroidota
TGA
Ser
>WENV183737587
PJUD01017069
272325
Bacteroidota
TGC
Ala
>WENV183737387
PJUD01005881
271643
Bacteroidota
GTC
Asp
>WENV183737137
PJUD01000562
780576
Bacteroidota
CCA
Trp
>WENV183737129
PJUD01000553
780576
Bacteroidota
CCA
Trp
>WENV183737022
PJUD01000243
780576
Bacteroidota
CCA
Trp
>WENV183737771
PJUD01031667
570778
Bacteroidota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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