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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV012970
AACY020355094
235752
Betaproteobacteria
TTT
Lys
>WENV056514
AACY023258616
283660
Betaproteobacteria
TTC
Glu
>WENV058014
AACY023314691
237516
Betaproteobacteria
GCC
Gly
>WENV058658
AACY023337742
237516
Betaproteobacteria
GCC
Gly
>WENV035288
AACY021684010
239252
Betaproteobacteria
TTT
Lys
>WENV042843
AACY022269985
239252
Betaproteobacteria
TTT
Lys
>WENV057227
AACY023288995
239252
Betaproteobacteria
TTT
Lys
>WENV057830
AACY023308063
239252
Betaproteobacteria
TTT
Lys
>WENV053357
AACY023091451
72340
Betaproteobacteria
TAG
Leu
>WENV057743
AACY023305096
72340
Betaproteobacteria
TAG
Leu
>WENV061300
AACY023428695
72340
Betaproteobacteria
TAG
Leu
>WENV016919
AACY020472296
96224
Betaproteobacteria
GTA
Tyr
>WENV013188
AACY020362127
145694
Betaproteobacteria
ACG
Arg
>WENV013189
AACY020362127
145694
Betaproteobacteria
ACG
Arg
>WENV051720
AACY022975464
145694
Betaproteobacteria
ACG
Arg
>WENV057501
AACY023296874
145694
Betaproteobacteria
ACG
Arg
>WENV058166
AACY023319864
145694
Betaproteobacteria
ACG
Arg
>WENV025301
AACY020876727
236112
Betaproteobacteria
GAA
Phe
>WENV043862
AACY022365590
236112
Betaproteobacteria
GAA
Phe
>WENV045520
AACY022524586
236112
Betaproteobacteria
GAA
Phe
>WENV060349
AACY023395571
236112
Betaproteobacteria
GAA
Phe
>WENV057456
AACY023295302
23830
Betaproteobacteria
CGA
Ser
>WENV055505
AACY023229945
238654
Betaproteobacteria
TGT
Thr
>WENV035073
AACY021667930
260088
Betaproteobacteria
CGT
Thr
>WENV012901
AACY020352825
59091
Betaproteobacteria
TAG
Leu
>WENV058417
AACY023328575
96225
Betaproteobacteria
CAA
Leu
>WENV058477
AACY023330398
96225
Betaproteobacteria
CAA
Leu
>WENV000556
AACY020016789
239248
Betaproteobacteria
TGT
Thr
>WENV001869
AACY020053243
239248
Betaproteobacteria
TGT
Thr
>WENV016243
AACY020458977
239248
Betaproteobacteria
TGT
Thr
>WENV024651
AACY020825939
239248
Betaproteobacteria
TGT
Thr
>WENV026100
AACY020940355
239248
Betaproteobacteria
TGT
Thr
>WENV030984
AACY021328401
239248
Betaproteobacteria
TGT
Thr
>WENV055042
AACY023208761
239248
Betaproteobacteria
TGT
Thr
>WENV055577
AACY023232014
239248
Betaproteobacteria
TGT
Thr
>WENV058487
AACY023330785
239248
Betaproteobacteria
TGT
Thr
>WENV058989
AACY023349758
239248
Betaproteobacteria
TGT
Thr
>WENV061552
AACY023434587
239248
Betaproteobacteria
TGT
Thr
>WENV012866
AACY020351632
147079
Betaproteobacteria
TTG
Gln
>WENV047205
AACY022646333
147079
Betaproteobacteria
TTG
Gln
>WENV033588
AACY021542140
173491
Betaproteobacteria
TCT
Arg
>WENV042148
AACY022215032
412591
Betaproteobacteria
GCA
Cys
>WENV057970
AACY023313154
412591
Betaproteobacteria
GCA
Cys
>WENV074961
AACY024006380
412591
Betaproteobacteria
GCA
Cys
>WENV057409
AACY023293864
67484
Betaproteobacteria
GTA
Tyr
>WENV012828
AACY020350292
68998
Betaproteobacteria
CAG
Leu
>WENV029380
AACY021194085
85133
Betaproteobacteria
GTA
Tyr
>WENV026740
AACY020989498
61237
Betaproteobacteria
TAG
Leu
>WENV057632
AACY023300813
61237
Betaproteobacteria
TAG
Leu
>WENV057669
AACY023302479
249068
Betaproteobacteria
CGC
Ala
>WENV058235
AACY023322059
249068
Betaproteobacteria
CGC
Ala
>WENV058461
AACY023330062
59503
Betaproteobacteria
CAG
Leu
>WENV058614
AACY023335614
59503
Betaproteobacteria
CAG
Leu
>WENV012767
AACY020348518
237351
Betaproteobacteria
TGT
Thr
>WENV013115
AACY020359431
16499
Betaproteobacteria
GGA
Ser
>WENV016795
AACY020470209
147332
Betaproteobacteria
CAT
Met
>WENV012704
AACY020346355
23691
Betaproteobacteria
CGA
Ser
>WENV057185
AACY023287659
3296
Betaproteobacteria
GCT
Ser
>WENV058497
AACY023331042
3296
Betaproteobacteria
GCT
Ser
>WENV058604
AACY023335191
3296
Betaproteobacteria
GCT
Ser
>WENV057509
AACY023297084
148500
Betaproteobacteria
TGG
Pro
>WENV057825
AACY023307996
148500
Betaproteobacteria
TGG
Pro
>WENV061969
AACY023445243
256728
Betaproteobacteria
GTT
Asn
>WENV016756
AACY020469254
147851
Betaproteobacteria
TTG
Gln
>WENV058858
AACY023344693
199861
Betaproteobacteria
CAT
Met
>WENV058506
AACY023331432
199861
Betaproteobacteria
CAT
Met
>WENV016890
AACY020471659
23831
Betaproteobacteria
TGA
Ser
>WENV045261
AACY022500419
23831
Betaproteobacteria
TGA
Ser
>WENV057840
AACY023308391
23831
Betaproteobacteria
TGA
Ser
>WENV058373
AACY023326812
23831
Betaproteobacteria
TGA
Ser
>WENV058510
AACY023331552
23831
Betaproteobacteria
TGA
Ser
>WENV058712
AACY023339291
23831
Betaproteobacteria
TGA
Ser
>WENV058940
AACY023347737
23831
Betaproteobacteria
TGA
Ser
>WENV074509
AACY023980128
23831
Betaproteobacteria
TGA
Ser
>WENV058188
AACY023320520
16529
Betaproteobacteria
GGA
Ser
>WENV051798
AACY022981988
48899
Betaproteobacteria
TGA
Ser
>WENV057510
AACY023297084
185931
Betaproteobacteria
TCT
Arg
>WENV032366
AACY021440295
239247
Betaproteobacteria
CCA
Trp
>WENV057390
AACY023293392
239247
Betaproteobacteria
CCA
Trp
>WENV058792
AACY023341912
239247
Betaproteobacteria
CCA
Trp
>WENV020247
AACY020551317
237352
Betaproteobacteria
CGT
Thr
>WENV052055
AACY023001651
237352
Betaproteobacteria
CGT
Thr
>WENV056168
AACY023249847
426829
Betaproteobacteria
TCC
Gly
>WENV061679
AACY023437260
426829
Betaproteobacteria
TCC
Gly
>WENV057316
AACY023291268
4627
Betaproteobacteria
GCT
Ser
>WENV022191
AACY020630375
240604
Betaproteobacteria
TAC
Val
>WENV044783
AACY022452556
240604
Betaproteobacteria
TAC
Val
>WENV072642
AACY023892007
240604
Betaproteobacteria
TAC
Val
>WENV012769
AACY020348588
96027
Betaproteobacteria
TAA
Leu
>WENV028679
AACY021138598
86049
Betaproteobacteria
GTA
Tyr
>WENV057471
AACY023295671
86049
Betaproteobacteria
GTA
Tyr
>WENV012745
AACY020347917
147321
Betaproteobacteria
TCT
Arg
>WENV016783
AACY020469821
37309
Betaproteobacteria
TAA
Leu
>WENV012924
AACY020353234
348115
Betaproteobacteria
CCT
Arg
>WENV001928
AACY020054199
412590
Betaproteobacteria
TCC
Gly
>WENV016920
AACY020472296
412590
Betaproteobacteria
TCC
Gly
>WENV013190
AACY020362130
30465
Betaproteobacteria
TGA
Ser
>WENV057991
AACY023313913
382684
Betaproteobacteria
CCT
Arg
>WENV058098
AACY023317464
382684
Betaproteobacteria
CCT
Arg
>WENV027198
AACY021026437
239253
Betaproteobacteria
CCG
Arg
>WENV058183
AACY023320348
239253
Betaproteobacteria
CCG
Arg
>WENV058958
AACY023348675
239253
Betaproteobacteria
CCG
Arg
>WENV057962
AACY023312897
239254
Betaproteobacteria
GTG
His
>WENV058178
AACY023320204
239254
Betaproteobacteria
GTG
His
>WENV057269
AACY023289898
16843
Betaproteobacteria
GGA
Ser
>WENV058102
AACY023317666
16843
Betaproteobacteria
GGA
Ser
>WENV057085
AACY023283772
72012
Betaproteobacteria
CAG
Leu
>WENV046954
AACY022630898
182616
Betaproteobacteria
CAT
Met
>WENV026988
AACY021010455
160841
Betaproteobacteria
TTG
Gln
>WENV030893
AACY021320202
160841
Betaproteobacteria
TTG
Gln
>WENV031138
AACY021343299
160841
Betaproteobacteria
TTG
Gln
>WENV031568
AACY021378046
160841
Betaproteobacteria
TTG
Gln
>WENV006639
AACY020177457
304536
Betaproteobacteria
TGT
Thr
>WENV006795
AACY020179772
304536
Betaproteobacteria
TGT
Thr
>WENV047215
AACY022647211
304536
Betaproteobacteria
TGT
Thr
>WENV058925
AACY023347323
304536
Betaproteobacteria
TGT
Thr
>WENV074553
AACY023982648
304536
Betaproteobacteria
TGT
Thr
>WENV057499
AACY023296740
144934
Betaproteobacteria
TTG
Gln
>WENV030079
AACY021254033
433086
Betaproteobacteria
GCA
Cys
>WENV064036
AACY023526572
236872
Betaproteobacteria
CCA
Trp
>WENV072872
AACY023900885
238002
Betaproteobacteria
GCC
Gly
>WENV001930
AACY020054368
283971
Betaproteobacteria
TAC
Val
>WENV012666
AACY020344738
23608
Betaproteobacteria
CGA
Ser
>WENV058926
AACY023347323
95620
Betaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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