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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV08001570
ABNJ01014523
3345
Gammaproteobacteria
>ENV08001598
ABNJ01066172
59960
Gammaproteobacteria
CAA
Leu
>ENV08001601
ABNJ01071777
59960
Gammaproteobacteria
CAA
Leu
>ENV08001604
ABNJ01074247
59960
Gammaproteobacteria
CAA
Leu
>ENV08001622
ABNJ01122532
59960
Gammaproteobacteria
CAA
Leu
>ENV08001595
ABNJ01058967
59960
Gammaproteobacteria
CAA
Leu
>ENV08001565
ABNJ01006567
188516
Gammaproteobacteria
CAT
Met
>ENV08001587
ABNJ01049842
188516
Gammaproteobacteria
CAT
Met
>ENV08001593
ABNJ01053755
188516
Gammaproteobacteria
CAT
Met
>ENV08001594
ABNJ01055377
188516
Gammaproteobacteria
CAT
Met
>ENV08001607
ABNJ01078158
188516
Gammaproteobacteria
CAT
Met
>ENV08001609
ABNJ01088362
188516
Gammaproteobacteria
CAT
Met
>ENV08001624
ABNJ01130619
188516
Gammaproteobacteria
CAT
Met
>ENV08001626
ABNJ01136104
188516
Gammaproteobacteria
CAT
Met
>ENV08001644
ABNJ01307424
188516
Gammaproteobacteria
CAT
Met
>ENV08001583
ABNJ01040109
146624
Gammaproteobacteria
CAT
Met
>ENV08001602
ABNJ01071955
146624
Gammaproteobacteria
CAT
Met
>ENV08001586
ABNJ01048922
147645
Gammaproteobacteria
GAC
Val
>ENV08001628
ABNJ01139417
266893
Gammaproteobacteria
GCC
Gly
>ENV08001636
ABNJ01175534
266893
Gammaproteobacteria
GCC
Gly
>ENV08001640
ABNJ01195965
266893
Gammaproteobacteria
GCC
Gly
>ENV08001641
ABNJ01201833
266893
Gammaproteobacteria
GCC
Gly
>ENV08001620
ABNJ01118028
239178
Gammaproteobacteria
GCC
Gly
>ENV08001642
ABNJ01240546
235317
Gammaproteobacteria
GGT
Thr
>ENV08001582
ABNJ01037107
254436
Gammaproteobacteria
GTT
Asn
>ENV08001627
ABNJ01138625
254436
Gammaproteobacteria
GTT
Asn
>ENV08001639
ABNJ01193182
235313
Gammaproteobacteria
GTT
Asn
>ENV08001574
ABNJ01021258
59305
Gammaproteobacteria
TAA
Leu
>ENV08001567
ABNJ01011845
16658
Gammaproteobacteria
TGA
Ser
>ENV08001569
ABNJ01014397
16658
Gammaproteobacteria
TGA
Ser
>ENV08001576
ABNJ01024515
16658
Gammaproteobacteria
TGA
Ser
>ENV08001630
ABNJ01140808
148441
Gammaproteobacteria
TGG
Pro
>ENV08001638
ABNJ01191548
148441
Gammaproteobacteria
TGG
Pro
>ENV08001631
ABNJ01142409
341770
Gammaproteobacteria
TTG
Gln
>ENV08001575
ABNJ01021466
238370
Gammaproteobacteria
TTT
Lys
>ENV08001579
ABNJ01033385
238370
Gammaproteobacteria
TTT
Lys
>ENV08001610
ABNJ01089745
238370
Gammaproteobacteria
TTT
Lys
>ENV08001643
ABNJ01264077
238370
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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