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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183747704
PPCM01019526
256453
Thermodesulfobacteriota
TGC
Ala
>WENV183746872
PPCM01000028
129717
Thermodesulfobacteriota
TTC
Glu
>WENV183746873
PPCM01000028
129717
Thermodesulfobacteriota
TTC
Glu
>WENV183747377
PPCM01001248
161078
Thermodesulfobacteriota
ACG
Arg
>WENV183747378
PPCM01001248
161078
Thermodesulfobacteriota
ACG
Arg
>WENV183747625
PPCM01010241
161078
Thermodesulfobacteriota
ACG
Arg
>WENV183747157
PPCM01000327
62196
Thermodesulfobacteriota
CAG
Leu
>WENV183747217
PPCM01000437
62196
Thermodesulfobacteriota
CAG
Leu
>WENV183747560
PPCM01005216
62196
Thermodesulfobacteriota
CAG
Leu
>WENV183747600
PPCM01007462
62196
Thermodesulfobacteriota
CAG
Leu
>WENV183747563
PPCM01005267
12283
Thermodesulfobacteriota
TGA
Ser
>WENV183746961
PPCM01000071
256456
Thermodesulfobacteriota
CAT
Met
>WENV183746870
PPCM01000028
154121
Thermodesulfobacteriota
GTC
Asp
>WENV183747226
PPCM01000476
154121
Thermodesulfobacteriota
GTC
Asp
>WENV183747653
PPCM01013850
154121
Thermodesulfobacteriota
GTC
Asp
>WENV183747655
PPCM01013986
154121
Thermodesulfobacteriota
GTC
Asp
>WENV183747688
PPCM01017481
154121
Thermodesulfobacteriota
GTC
Asp
>WENV183747778
PPCM01036858
154121
Thermodesulfobacteriota
GTC
Asp
>WENV183747083
PPCM01000174
165016
Thermodesulfobacteriota
CGG
Pro
>WENV183747683
PPCM01017123
165016
Thermodesulfobacteriota
CGG
Pro
>WENV183747727
PPCM01022568
165016
Thermodesulfobacteriota
CGG
Pro
>WENV183746792
PPCM01000010
269764
Thermodesulfobacteriota
GGC
Ala
>WENV183747090
PPCM01000187
269764
Thermodesulfobacteriota
GGC
Ala
>WENV183747482
PPCM01003087
269764
Thermodesulfobacteriota
GGC
Ala
>WENV183746856
PPCM01000024
256451
Thermodesulfobacteriota
CTT
Lys
>WENV183747554
PPCM01005019
247575
Thermodesulfobacteriota
TGC
Ala
>WENV183747129
PPCM01000243
166515
Thermodesulfobacteriota
GGG
Pro
>WENV183747340
PPCM01001008
349351
Thermodesulfobacteriota
CTG
Gln
>WENV183747664
PPCM01015173
349351
Thermodesulfobacteriota
CTG
Gln
>WENV183747066
PPCM01000158
351789
Thermodesulfobacteriota
GAC
Val
>WENV183747218
PPCM01000438
282090
Thermodesulfobacteriota
GGC
Ala
>WENV183746864
PPCM01000024
256448
Thermodesulfobacteriota
GTT
Asn
>WENV183747224
PPCM01000476
162516
Thermodesulfobacteriota
GTC
Asp
>WENV183747564
PPCM01005275
174404
Thermodesulfobacteriota
CCA
Trp
>WENV183747111
PPCM01000215
99359
Thermodesulfobacteriota
TAG
Leu
>WENV183747662
PPCM01014870
99359
Thermodesulfobacteriota
TAG
Leu
>WENV183747193
PPCM01000390
349350
Thermodesulfobacteriota
GAC
Val
>WENV183747234
PPCM01000500
349350
Thermodesulfobacteriota
GAC
Val
>WENV183747152
PPCM01000304
161079
Thermodesulfobacteriota
CCA
Trp
>WENV183747517
PPCM01003725
161079
Thermodesulfobacteriota
CCA
Trp
>WENV183747548
PPCM01004741
161079
Thermodesulfobacteriota
CCA
Trp
>WENV183747579
PPCM01006331
161079
Thermodesulfobacteriota
CCA
Trp
>WENV183746975
PPCM01000080
266268
Thermodesulfobacteriota
TCC
Gly
>WENV183747724
PPCM01022255
266268
Thermodesulfobacteriota
TCC
Gly
>WENV183747212
PPCM01000428
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183747213
PPCM01000428
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183747654
PPCM01013857
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183747712
PPCM01020468
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183747713
PPCM01020468
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183746932
PPCM01000046
256452
Thermodesulfobacteriota
CTC
Glu
>WENV183747530
PPCM01004105
256452
Thermodesulfobacteriota
CTC
Glu
>WENV183747594
PPCM01007132
256283
Thermodesulfobacteriota
GAA
Phe
>WENV183747663
PPCM01014887
256283
Thermodesulfobacteriota
GAA
Phe
>WENV183747387
PPCM01001481
161086
Thermodesulfobacteriota
CAT
Met
>WENV183747388
PPCM01001481
161086
Thermodesulfobacteriota
CAT
Met
>WENV183747461
PPCM01002578
161086
Thermodesulfobacteriota
CAT
Met
>WENV183747272
PPCM01000637
62195
Thermodesulfobacteriota
GAG
Leu
>WENV183747273
PPCM01000637
62195
Thermodesulfobacteriota
GAG
Leu
>WENV183747509
PPCM01003623
62195
Thermodesulfobacteriota
GAG
Leu
>WENV183747510
PPCM01003623
62195
Thermodesulfobacteriota
GAG
Leu
>WENV183747711
PPCM01020378
62195
Thermodesulfobacteriota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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