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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170726813
LSQX01395073
208822
Betaproteobacteria
TTG
Gln
>WENV170726578
LSQX01386590
225748
Betaproteobacteria
TCT
Arg
>WENV170717407
LSQX01034474
498851
Betaproteobacteria
GCA
Cys
>WENV170719366
LSQX01112172
498851
Betaproteobacteria
GCA
Cys
>WENV170719304
LSQX01109696
207884
Betaproteobacteria
CAT
Met
>WENV170720167
LSQX01143716
207884
Betaproteobacteria
CAT
Met
>WENV170721569
LSQX01195375
207884
Betaproteobacteria
CAT
Met
>WENV170722179
LSQX01219880
207884
Betaproteobacteria
CAT
Met
>WENV170726858
LSQX01396425
207884
Betaproteobacteria
CAT
Met
>WENV170719715
LSQX01124109
315781
Betaproteobacteria
TGC
Ala
>WENV170717799
LSQX01050003
159239
Betaproteobacteria
ACG
Arg
>WENV170717800
LSQX01050003
159239
Betaproteobacteria
ACG
Arg
>WENV170718459
LSQX01076671
159239
Betaproteobacteria
ACG
Arg
>WENV170721570
LSQX01195375
159239
Betaproteobacteria
ACG
Arg
>WENV170722180
LSQX01219880
159239
Betaproteobacteria
ACG
Arg
>WENV170724908
LSQX01323214
159239
Betaproteobacteria
ACG
Arg
>WENV170724949
LSQX01324600
159239
Betaproteobacteria
ACG
Arg
>WENV170726859
LSQX01396425
159239
Betaproteobacteria
ACG
Arg
>WENV170724393
LSQX01303866
284936
Betaproteobacteria
CGT
Thr
>WENV170726570
LSQX01386166
237116
Betaproteobacteria
GAT
Ile
>WENV170726387
LSQX01378261
237116
Betaproteobacteria
GAT
Ile
>WENV170723298
LSQX01263399
237116
Betaproteobacteria
GAT
Ile
>WENV170719714
LSQX01124109
237116
Betaproteobacteria
GAT
Ile
>WENV170718972
LSQX01097105
237116
Betaproteobacteria
GAT
Ile
>WENV170717938
LSQX01055221
124541
Betaproteobacteria
TAG
Leu
>WENV170719154
LSQX01103870
124541
Betaproteobacteria
TAG
Leu
>WENV170720650
LSQX01160972
124541
Betaproteobacteria
TAG
Leu
>WENV170721767
LSQX01203218
124541
Betaproteobacteria
TAG
Leu
>WENV170726912
LSQX01398646
124541
Betaproteobacteria
TAG
Leu
>WENV170725780
LSQX01356203
412191
Betaproteobacteria
CCT
Arg
>WENV170717406
LSQX01034474
355697
Betaproteobacteria
GCC
Gly
>WENV170717408
LSQX01034474
355697
Betaproteobacteria
GCC
Gly
>WENV170722281
LSQX01223601
355697
Betaproteobacteria
GCC
Gly
>WENV170717332
LSQX01032073
305292
Betaproteobacteria
GAA
Phe
>WENV170717546
LSQX01040130
305292
Betaproteobacteria
GAA
Phe
>WENV170718568
LSQX01081856
305292
Betaproteobacteria
GAA
Phe
>WENV170720126
LSQX01142050
305292
Betaproteobacteria
GAA
Phe
>WENV170721758
LSQX01202946
305292
Betaproteobacteria
GAA
Phe
>WENV170724077
LSQX01292363
305292
Betaproteobacteria
GAA
Phe
>WENV170722786
LSQX01242973
283445
Betaproteobacteria
GTT
Asn
>WENV170722787
LSQX01242973
283445
Betaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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