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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
132 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170963049
MRWG01000005
195199
Alphaproteobacteria
GTC
Asp
>WENV170963050
MRWG01000005
195199
Alphaproteobacteria
GTC
Asp
>WENV170963888
MRWG01001182
178510
Alphaproteobacteria
ACG
Arg
>WENV170964967
MRWG01090242
178510
Alphaproteobacteria
ACG
Arg
>WENV170964969
MRWG01090311
178510
Alphaproteobacteria
ACG
Arg
>WENV170963521
MRWG01000255
489502
Alphaproteobacteria
GCA
Cys
>WENV170963984
MRWG01001738
29627
Alphaproteobacteria
GGA
Ser
>WENV170963629
MRWG01000401
293691
Alphaproteobacteria
GAA
Phe
>WENV170963615
MRWG01000370
400848
Alphaproteobacteria
GAC
Val
>WENV170964202
MRWG01004810
282745
Alphaproteobacteria
TAC
Val
>WENV170964593
MRWG01021835
282745
Alphaproteobacteria
TAC
Val
>WENV170963512
MRWG01000244
207217
Alphaproteobacteria
CCG
Arg
>WENV170963028
MRWG01000004
284238
Alphaproteobacteria
CAT
Met
>WENV170964163
MRWG01004167
29749
Alphaproteobacteria
GGA
Ser
>WENV170964787
MRWG01043691
29749
Alphaproteobacteria
GGA
Ser
>WENV170964788
MRWG01043697
29749
Alphaproteobacteria
GGA
Ser
>WENV170964269
MRWG01006416
281452
Alphaproteobacteria
CGT
Thr
>WENV170964323
MRWG01008091
281452
Alphaproteobacteria
CGT
Thr
>WENV170964577
MRWG01020652
281452
Alphaproteobacteria
CGT
Thr
>WENV170963547
MRWG01000281
416697
Alphaproteobacteria
GAC
Val
>WENV170963378
MRWG01000140
140876
Alphaproteobacteria
>WENV170963024
MRWG01000004
179390
Alphaproteobacteria
TGG
Pro
>WENV170963830
MRWG01000901
179390
Alphaproteobacteria
TGG
Pro
>WENV170964586
MRWG01021185
210530
Alphaproteobacteria
CGG
Pro
>WENV170963730
MRWG01000606
400387
Alphaproteobacteria
GGT
Thr
>WENV170963437
MRWG01000184
140963
Alphaproteobacteria
>WENV170963566
MRWG01000293
201940
Alphaproteobacteria
CAT
Met
>WENV170963008
MRWG01000002
77412
Alphaproteobacteria
CAG
Leu
>WENV170963057
MRWG01000006
180022
Alphaproteobacteria
ACG
Arg
>WENV170963177
MRWG01000027
180022
Alphaproteobacteria
ACG
Arg
>WENV170964011
MRWG01001935
180022
Alphaproteobacteria
ACG
Arg
>WENV170964865
MRWG01062013
180022
Alphaproteobacteria
ACG
Arg
>WENV170964866
MRWG01062034
180022
Alphaproteobacteria
ACG
Arg
>WENV170963288
MRWG01000077
481268
Alphaproteobacteria
TCC
Gly
>WENV170964431
MRWG01011294
73490
Alphaproteobacteria
GAG
Leu
>WENV170963587
MRWG01000327
283601
Alphaproteobacteria
CGT
Thr
>WENV170964846
MRWG01057732
283601
Alphaproteobacteria
CGT
Thr
>WENV170964390
MRWG01009836
193088
Alphaproteobacteria
GAT
Ile
>WENV170964542
MRWG01017444
193088
Alphaproteobacteria
GAT
Ile
>WENV170964561
MRWG01019369
193088
Alphaproteobacteria
GAT
Ile
>WENV170964637
MRWG01025941
193088
Alphaproteobacteria
GAT
Ile
>WENV170963442
MRWG01000188
314617
Alphaproteobacteria
TAC
Val
>WENV170963837
MRWG01000930
285028
Alphaproteobacteria
CTT
Lys
>WENV170964761
MRWG01040405
414252
Alphaproteobacteria
CAC
Val
>WENV170964767
MRWG01040803
414252
Alphaproteobacteria
CAC
Val
>WENV170963531
MRWG01000270
75222
Alphaproteobacteria
GAG
Leu
>WENV170963707
MRWG01000557
399480
Alphaproteobacteria
GAA
Phe
>WENV170963729
MRWG01000606
399480
Alphaproteobacteria
GAA
Phe
>WENV170963408
MRWG01000165
487436
Alphaproteobacteria
TCC
Gly
>WENV170964583
MRWG01020984
281659
Alphaproteobacteria
TGC
Ala
>WENV170964397
MRWG01009955
281659
Alphaproteobacteria
TGC
Ala
>WENV170963353
MRWG01000123
400384
Alphaproteobacteria
TTC
Glu
>WENV170963354
MRWG01000123
400384
Alphaproteobacteria
TTC
Glu
>WENV170963696
MRWG01000524
400384
Alphaproteobacteria
TTC
Glu
>WENV170963506
MRWG01000241
78115
Alphaproteobacteria
GAG
Leu
>WENV170963069
MRWG01000007
78115
Alphaproteobacteria
GAG
Leu
>WENV170963224
MRWG01000046
400031
Alphaproteobacteria
TTG
Gln
>WENV170963037
MRWG01000004
29702
Alphaproteobacteria
GGA
Ser
>WENV170963776
MRWG01000730
178815
Alphaproteobacteria
GGG
Pro
>WENV170963811
MRWG01000826
118100
Alphaproteobacteria
GTA
Tyr
>WENV170963160
MRWG01000024
400945
Alphaproteobacteria
GCC
Gly
>WENV170963720
MRWG01000590
283596
Alphaproteobacteria
TTC
Glu
>WENV170963918
MRWG01001361
283596
Alphaproteobacteria
TTC
Glu
>WENV170964079
MRWG01002737
283596
Alphaproteobacteria
TTC
Glu
>WENV170964313
MRWG01007918
283596
Alphaproteobacteria
TTC
Glu
>WENV170964317
MRWG01007971
283596
Alphaproteobacteria
TTC
Glu
>WENV170963401
MRWG01000159
178509
Alphaproteobacteria
CCT
Arg
>WENV170963672
MRWG01000481
178509
Alphaproteobacteria
CCT
Arg
>WENV170963202
MRWG01000038
179386
Alphaproteobacteria
TCT
Arg
>WENV170964562
MRWG01019369
307179
Alphaproteobacteria
TGC
Ala
>WENV170964883
MRWG01063979
400249
Alphaproteobacteria
GCC
Gly
>WENV170964884
MRWG01064043
400249
Alphaproteobacteria
GCC
Gly
>WENV170963954
MRWG01001593
141247
Alphaproteobacteria
CAA
Leu
>WENV170964178
MRWG01004445
73986
Alphaproteobacteria
CAG
Leu
>WENV170964346
MRWG01008777
73986
Alphaproteobacteria
CAG
Leu
>WENV170964757
MRWG01039897
210541
Alphaproteobacteria
CAT
Met
>WENV170963283
MRWG01000074
179883
Alphaproteobacteria
CCA
Trp
>WENV170964567
MRWG01019472
122202
Alphaproteobacteria
GTA
Tyr
>WENV170963065
MRWG01000007
33571
Alphaproteobacteria
TGA
Ser
>WENV170964502
MRWG01015255
118316
Alphaproteobacteria
CAA
Leu
>WENV170964503
MRWG01015280
118316
Alphaproteobacteria
CAA
Leu
>WENV170963031
MRWG01000004
178503
Alphaproteobacteria
GGG
Pro
>WENV170963861
MRWG01001034
178503
Alphaproteobacteria
GGG
Pro
>WENV170963773
MRWG01000722
198858
Alphaproteobacteria
CAT
Met
>WENV170963701
MRWG01000545
198858
Alphaproteobacteria
CAT
Met
>WENV170963911
MRWG01001321
34351
Alphaproteobacteria
CGA
Ser
>WENV170963025
MRWG01000004
29701
Alphaproteobacteria
CGA
Ser
>WENV170964808
MRWG01047729
210458
Alphaproteobacteria
CGG
Pro
>WENV170964225
MRWG01005289
210458
Alphaproteobacteria
CGG
Pro
>WENV170964175
MRWG01004376
210458
Alphaproteobacteria
CGG
Pro
>WENV170963329
MRWG01000105
210458
Alphaproteobacteria
CGG
Pro
>WENV170963553
MRWG01000285
400419
Alphaproteobacteria
TTG
Gln
>WENV170964932
MRWG01079398
400544
Alphaproteobacteria
GGT
Thr
>WENV170964913
MRWG01072223
400544
Alphaproteobacteria
GGT
Thr
>WENV170964304
MRWG01007575
400544
Alphaproteobacteria
GGT
Thr
>WENV170964149
MRWG01003854
400544
Alphaproteobacteria
GGT
Thr
>WENV170964125
MRWG01003432
400544
Alphaproteobacteria
GGT
Thr
>WENV170963966
MRWG01001647
400544
Alphaproteobacteria
GGT
Thr
>WENV170963780
MRWG01000749
400544
Alphaproteobacteria
GGT
Thr
>WENV170964219
MRWG01005116
419842
Alphaproteobacteria
GCC
Gly
>WENV170964719
MRWG01034344
182475
Alphaproteobacteria
GTC
Asp
>WENV170963289
MRWG01000077
100288
Alphaproteobacteria
TAA
Leu
>WENV170963434
MRWG01000183
286018
Alphaproteobacteria
CCA
Trp
>WENV170963351
MRWG01000123
29815
Alphaproteobacteria
TGA
Ser
>WENV170963769
MRWG01000704
176490
Alphaproteobacteria
CAT
Met
>WENV170963029
MRWG01000004
398994
Alphaproteobacteria
GTT
Asn
>WENV170963030
MRWG01000004
398994
Alphaproteobacteria
GTT
Asn
>WENV170964013
MRWG01001946
398994
Alphaproteobacteria
GTT
Asn
>WENV170963822
MRWG01000869
179721
Alphaproteobacteria
CCG
Arg
>WENV170964347
MRWG01008784
179721
Alphaproteobacteria
CCG
Arg
>WENV170963033
MRWG01000004
281676
Alphaproteobacteria
TAC
Val
>WENV170964785
MRWG01043446
399350
Alphaproteobacteria
TTG
Gln
>WENV170964786
MRWG01043487
399350
Alphaproteobacteria
TTG
Gln
>WENV170963630
MRWG01000402
178507
Alphaproteobacteria
GTG
His
>WENV170964239
MRWG01005718
296763
Alphaproteobacteria
CCA
Trp
>WENV170963258
MRWG01000066
121990
Alphaproteobacteria
TAG
Leu
>WENV170963673
MRWG01000484
121990
Alphaproteobacteria
TAG
Leu
>WENV170963229
MRWG01000050
283255
Alphaproteobacteria
GGC
Ala
>WENV170963709
MRWG01000568
404182
Alphaproteobacteria
CAC
Val
>WENV170963032
MRWG01000004
411290
Alphaproteobacteria
CAC
Val
>WENV170963441
MRWG01000188
411290
Alphaproteobacteria
CAC
Val
>WENV170963269
MRWG01000070
282980
Alphaproteobacteria
TGT
Thr
>WENV170964236
MRWG01005636
282980
Alphaproteobacteria
TGT
Thr
>WENV170964677
MRWG01030410
282980
Alphaproteobacteria
TGT
Thr
>WENV170963026
MRWG01000004
178505
Alphaproteobacteria
CCG
Arg
>WENV170963375
MRWG01000140
400693
Alphaproteobacteria
GCC
Gly
>WENV170963376
MRWG01000140
400693
Alphaproteobacteria
GCC
Gly
>WENV170963377
MRWG01000140
400693
Alphaproteobacteria
GCC
Gly
>WENV170963327
MRWG01000104
284796
Alphaproteobacteria
CGT
Thr
>WENV170963400
MRWG01000159
283257
Alphaproteobacteria
TTT
Lys
>WENV170963645
MRWG01000419
283257
Alphaproteobacteria
TTT
Lys
>WENV170964789
MRWG01043943
305449
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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