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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181228620
OFEH01000505
13548
Aquificota
GCT
Ser
>WENV181228703
OFEH01001369
156742
Aquificota
GAT
Ile
>WENV181228742
OFEH01002404
287442
Aquificota
TGT
Thr
>WENV181228503
OFEH01000086
183788
Aquificota
CCT
Arg
>WENV181228769
OFEH01003523
183788
Aquificota
CCT
Arg
>WENV181228606
OFEH01000406
316927
Aquificota
CGG
Pro
>WENV181228672
OFEH01000916
402787
Aquificota
CCC
Gly
>WENV181228668
OFEH01000885
288897
Aquificota
CCG
Arg
>WENV181228640
OFEH01000626
47029
Aquificota
TAG
Leu
>WENV181228464
OFEH01000026
287458
Aquificota
GAA
Phe
>WENV181228558
OFEH01000192
287481
Aquificota
GTG
His
>WENV181228704
OFEH01001369
403670
Aquificota
TGC
Ala
>WENV181228611
OFEH01000420
402789
Aquificota
GCC
Gly
>WENV181228502
OFEH01000086
402770
Aquificota
TAC
Val
>WENV181228560
OFEH01000198
403671
Aquificota
CAT
Met
>WENV181228770
OFEH01003605
402810
Aquificota
GCA
Cys
>WENV181228639
OFEH01000626
183787
Aquificota
TCT
Arg
>WENV181228743
OFEH01002535
183787
Aquificota
TCT
Arg
>WENV181228685
OFEH01001072
100714
Aquificota
CAG
Leu
>WENV181228565
OFEH01000231
287443
Aquificota
CGT
Thr
>WENV181228566
OFEH01000231
288923
Aquificota
CAT
Met
>WENV181228631
OFEH01000549
287467
Aquificota
CTT
Lys
>WENV181228687
OFEH01001099
287467
Aquificota
CTT
Lys
>WENV181228756
OFEH01003032
287467
Aquificota
CTT
Lys
>WENV181228582
OFEH01000317
316929
Aquificota
GGG
Pro
>WENV181228625
OFEH01000513
287430
Aquificota
CCA
Trp
>WENV181228521
OFEH01000106
80746
Aquificota
GAG
Leu
>WENV181228622
OFEH01000507
20727
Aquificota
CGA
Ser
>WENV181228583
OFEH01000317
183807
Aquificota
CAT
Met
>WENV181228556
OFEH01000192
100715
Aquificota
TAA
Leu
>WENV181228499
OFEH01000080
287455
Aquificota
TGG
Pro
>WENV181228557
OFEH01000192
287497
Aquificota
TTG
Gln
>WENV181228567
OFEH01000231
288911
Aquificota
GGC
Ala
>WENV181228667
OFEH01000863
183789
Aquificota
ACG
Arg
>WENV181228650
OFEH01000734
287466
Aquificota
TTT
Lys
>WENV181228564
OFEH01000224
156745
Aquificota
TTC
Glu
>WENV181228686
OFEH01001076
287503
Aquificota
GTT
Asn
>WENV181228713
OFEH01001447
8770
Aquificota
GGA
Ser
>WENV181228559
OFEH01000198
156748
Aquificota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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