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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183748646
PPFU01063631
77010
Alphaproteobacteria
GAG
Leu
>WENV183749161
PPFU01128393
77010
Alphaproteobacteria
GAG
Leu
>WENV183749972
PPFU01239818
77010
Alphaproteobacteria
GAG
Leu
>WENV183748391
PPFU01034766
398995
Alphaproteobacteria
CAC
Val
>WENV183749918
PPFU01231719
296698
Alphaproteobacteria
CGC
Ala
>WENV183748233
PPFU01020914
179639
Alphaproteobacteria
ACG
Arg
>WENV183750479
PPFU01310041
207217
Alphaproteobacteria
CCG
Arg
>WENV183750155
PPFU01264431
424450
Alphaproteobacteria
GGT
Thr
>WENV183748501
PPFU01046224
176146
Alphaproteobacteria
CAT
Met
>WENV183749493
PPFU01176869
482100
Alphaproteobacteria
TCC
Gly
>WENV183748171
PPFU01016719
29596
Alphaproteobacteria
GCT
Ser
>WENV183748651
PPFU01064686
289945
Alphaproteobacteria
TTC
Glu
>WENV183749776
PPFU01212176
289945
Alphaproteobacteria
TTC
Glu
>WENV183749774
PPFU01211923
29656
Alphaproteobacteria
CGA
Ser
>WENV183749482
PPFU01175148
184691
Alphaproteobacteria
GTG
His
>WENV183749107
PPFU01120416
481802
Alphaproteobacteria
TCC
Gly
>WENV183748913
PPFU01096766
73490
Alphaproteobacteria
GAG
Leu
>WENV183748353
PPFU01030503
288727
Alphaproteobacteria
>WENV183750516
PPFU01315269
399480
Alphaproteobacteria
GAA
Phe
>WENV183748424
PPFU01037663
487436
Alphaproteobacteria
TCC
Gly
>WENV183748145
PPFU01015271
400384
Alphaproteobacteria
TTC
Glu
>WENV183749850
PPFU01221394
29671
Alphaproteobacteria
TGA
Ser
>WENV183750478
PPFU01310041
202191
Alphaproteobacteria
CCG
Arg
>WENV183748158
PPFU01016094
25643
Alphaproteobacteria
GGA
Ser
>WENV183750206
PPFU01271915
282977
Alphaproteobacteria
CAT
Met
>WENV183748170
PPFU01016704
283398
Alphaproteobacteria
TGC
Ala
>WENV183750050
PPFU01251986
178729
Alphaproteobacteria
TGG
Pro
>WENV183748779
PPFU01079777
403836
Alphaproteobacteria
>WENV183749565
PPFU01185893
403836
Alphaproteobacteria
>WENV183747828
PPFU01000096
399340
Alphaproteobacteria
GTT
Asn
>WENV183749692
PPFU01200392
157150
Alphaproteobacteria
GGG
Pro
>WENV183750176
PPFU01266721
301916
Alphaproteobacteria
TAC
Val
>WENV183749964
PPFU01238352
183632
Alphaproteobacteria
GGG
Pro
>WENV183748190
PPFU01017682
340918
Alphaproteobacteria
CGT
Thr
>WENV183748886
PPFU01093067
340918
Alphaproteobacteria
CGT
Thr
>WENV183749597
PPFU01190201
340918
Alphaproteobacteria
CGT
Thr
>WENV183749492
PPFU01176797
121250
Alphaproteobacteria
TAG
Leu
>WENV183749249
PPFU01141936
427571
Alphaproteobacteria
GCC
Gly
>WENV183749962
PPFU01238209
427571
Alphaproteobacteria
GCC
Gly
>WENV183747842
PPFU01000519
400103
Alphaproteobacteria
TGT
Thr
>WENV183747919
PPFU01002953
281409
Alphaproteobacteria
TTT
Lys
>WENV183748708
PPFU01071864
184517
Alphaproteobacteria
GGG
Pro
>WENV183748272
PPFU01024130
197061
Alphaproteobacteria
CCT
Arg
>WENV183749564
PPFU01185722
176153
Alphaproteobacteria
CAT
Met
>WENV183748195
PPFU01018269
176153
Alphaproteobacteria
CAT
Met
>WENV183750300
PPFU01283028
436046
Alphaproteobacteria
GAC
Val
>WENV183748345
PPFU01029761
100184
Alphaproteobacteria
CAG
Leu
>WENV183748656
PPFU01065146
178503
Alphaproteobacteria
GGG
Pro
>WENV183747843
PPFU01000578
400517
Alphaproteobacteria
GGT
Thr
>WENV183747837
PPFU01000429
400517
Alphaproteobacteria
GGT
Thr
>WENV183750477
PPFU01309895
419842
Alphaproteobacteria
GCC
Gly
>WENV183749265
PPFU01144515
229804
Alphaproteobacteria
GTC
Asp
>WENV183750431
PPFU01302865
481098
Alphaproteobacteria
CTG
Gln
>WENV183750365
PPFU01293080
481098
Alphaproteobacteria
CTG
Gln
>WENV183749279
PPFU01146319
481098
Alphaproteobacteria
CTG
Gln
>WENV183750177
PPFU01266882
182475
Alphaproteobacteria
GTC
Asp
>WENV183748596
PPFU01057931
282658
Alphaproteobacteria
CGT
Thr
>WENV183749525
PPFU01180820
422170
Alphaproteobacteria
GGT
Thr
>WENV183749921
PPFU01232547
400515
Alphaproteobacteria
GAC
Val
>WENV183749274
PPFU01145454
178736
Alphaproteobacteria
CCT
Arg
>WENV183748253
PPFU01022455
398994
Alphaproteobacteria
GTT
Asn
>WENV183749263
PPFU01144170
398994
Alphaproteobacteria
GTT
Asn
>WENV183750143
PPFU01262758
481423
Alphaproteobacteria
CTG
Gln
>WENV183749595
PPFU01190125
280785
Alphaproteobacteria
CCA
Trp
>WENV183748644
PPFU01063469
350583
Alphaproteobacteria
TAC
Val
>WENV183748732
PPFU01073712
447674
Alphaproteobacteria
CAC
Val
>WENV183748309
PPFU01027680
145313
Alphaproteobacteria
>WENV183750190
PPFU01269390
145313
Alphaproteobacteria
>WENV183750193
PPFU01270110
282981
Alphaproteobacteria
CCA
Trp
>WENV183749120
PPFU01122172
178507
Alphaproteobacteria
GTG
His
>WENV183748448
PPFU01040779
178784
Alphaproteobacteria
CAT
Met
>WENV183748177
PPFU01016954
190609
Alphaproteobacteria
TCT
Arg
>WENV183749929
PPFU01233607
84860
Alphaproteobacteria
CAG
Leu
>WENV183749602
PPFU01190446
118150
Alphaproteobacteria
TAG
Leu
>WENV183750252
PPFU01276448
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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